Array 1 40887-44087 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDZI01000010.1 Macrococcus caseolyticus strain DE0369 NODE_10_length_44215_cov_128.253896, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 40887 36 100.0 30 .................................... ACATTCTAGTGATAATACATTTGTTACTCT 40953 36 100.0 30 .................................... AAGAAGTTGCTGGAAGTATTGATTTTGATT 41019 36 100.0 30 .................................... TCAACCAATCAAGAACAGTACTTTGAACGT 41085 36 100.0 29 .................................... AGAAAAAATGTCATTATGGTAGCTCCTAA 41150 36 100.0 30 .................................... AAGAGTATCTTGTTCAACTCGTTCACCTTT 41216 36 100.0 30 .................................... TTTGCCAATTGATTTCCTCCTTATTATTTT 41282 36 100.0 29 .................................... TGGTGCAGAACGTATTCGCCATCGAATAA 41347 36 100.0 31 .................................... GACGAAGTACCCCAAGTACCCGAAGTTGTCG 41414 36 100.0 30 .................................... ATTCGTAAGCCATCTCGTCTCCATCTGCAT 41480 36 100.0 30 .................................... GTTGCTTCTTTCATTACTTGAATGATACGT 41546 36 100.0 30 .................................... TAAATGTCTCTCAATCGCTTTTATCATGTC 41612 36 100.0 30 .................................... TTAAAACAGGTGCAGACTTTGAACAACAAA 41678 36 100.0 29 .................................... GTTTTCTTAAATATTGAATTATATGATGC 41743 36 100.0 30 .................................... ACAGCGATTGATTATTTAGTAAAAAAAGGC 41809 36 100.0 30 .................................... GACGATAGTGCGAGTTCTCCGTACAATTCA 41875 36 100.0 29 .................................... CTAATTTAATTGAATGGATTAACGGAAGG 41940 36 100.0 31 .................................... GGTTTAAAAATGATAGATAAAATAGTCCTAT 42007 36 100.0 29 .................................... CGTTAAACCGGGCGACTATCTAGGAGTAT 42072 36 100.0 30 .................................... CAAGTCTATTATAGCATGTTCTTCGACTGT 42138 36 100.0 30 .................................... TGATGGTAATGAGTTGAGAATCATGTCAGA 42204 36 100.0 30 .................................... TGAATGATATATGATAGTGTGATAATGTGA 42270 36 100.0 30 .................................... TAGATACTGATGAAAAATTAAGAGATCTAA 42336 36 100.0 30 .................................... CAGGACGACCACACAAGCGCTACACATATA 42402 36 100.0 30 .................................... TGTGTCCTTATGCACCCAACCATTATTGCT 42468 36 100.0 29 .................................... TGATTACTTAGAATCATTCGAGAACAGTT 42533 36 100.0 30 .................................... GTACGTCACTGCACCAATTGCAGCAGGATT 42599 36 100.0 31 .................................... ATTCATTTAATACTGCATATGCTTCATTTTG 42666 36 100.0 29 .................................... ATAAGTTCGTGGTCTAACTCTTTATTGAG 42731 36 100.0 30 .................................... AGGTCCTATCGAGATTTATAAGGAAACATC 42797 36 100.0 30 .................................... TTACAGTAGTTTGTTGTAACGTGGATCAAG 42863 36 100.0 30 .................................... GTTGGTATATGACAACATCACTAAGACACG 42929 36 100.0 29 .................................... CCACTTACTTTATATCCAGCGAATGTTCT 42994 36 100.0 30 .................................... TAAGGAGGTTATCCACGTATCTCATGATGG 43060 36 100.0 30 .................................... TTTTATGTGCTTACATATTACAATCGTACA 43126 36 100.0 30 .................................... ATTTCGTGCATTACGTCCGACTTGTCCAAA 43192 36 100.0 30 .................................... TTCTATGTGCTTATGTGTTGCAATCGTATT 43258 36 100.0 30 .................................... AGGACTTACAGAGTTTTATTACAAAGTACA 43324 36 100.0 30 .................................... ACTTGAAGTAATAATTTCTTCTATTTCATC 43390 36 100.0 30 .................................... TTGTGAACTATCTAAAAAGCCTTTGCAAGT 43456 36 100.0 30 .................................... AAGGGCGATGATAAGAAAATATGGCATACG 43522 36 100.0 30 .................................... ACAAGAAACAGGCTAGTATCGTGTTCAACA 43588 36 100.0 30 .................................... TATGGCGTATGCAAGCGATACACATACTGC 43654 36 100.0 29 .................................... TCATTTAACAACTCCTAACGCACCCTTTG 43719 36 97.2 30 ...................................T TGAAAAAATCTCATAAAAAAAGAGCCATAC 43785 36 100.0 30 .................................... ACTTCATTTCCGTAATGATCTATCTCGTTA 43851 36 100.0 30 .................................... TGCTTCCGTTTCCTGCATGTAGTTATACGA 43917 36 97.2 29 ...............................A.... TCCATCACGTCTCTCATCATCTCGTTATC 43982 36 100.0 30 .................................... TATCATTTGTGAGAAGAAAACTGATGTTAA 44048 36 88.9 0 .......................C...C.....T.T | GTTC [44075] ========== ====== ====== ====== ==================================== =============================== ================== 49 36 99.7 30 GTTTTAGAACTATGATCTTTTAGAATGAAGTGAAAC # Left flank : TTTTTAAAATAGATGTTCATAATGATTTTAGTCATTTAAGTGCAATACAGGCGAGGAAAGCATGTATTGATTTGATGACAGAGGAGAAAAAAGAAAATATTCTTTTTCTATTGTTTCCTGAAGCAAATCTGGGTATAAGGGACGTTAAATCCTTTATGGATTTAATTAAGAATTATGGAATGACAACGATCATGGTTACAAATCATCCATATTTTATGGTAGAAGCGGATTCTTTGGCTATGAGCAAGCATAATATGACTTTGTTTGATATTAATCAGGTTAGAGACGAATTTCGATTAATGTTCCCAAACGAAGAGATAGAGGAGAACATTGTGAGACAAATAGCTATTAATGAATTTTCTCGACAATACTTTATTAAAGATGAGCGCTATATCAGATTTATTAATGAGTACTAGTCGTGTATAATAAATAATAACTATAAAAACTGTTTCATTATCACTATAAAGAGTAGTTTACACCGCATAACTTCGTGTTTTGAG # Right flank : GAGTATTAGTATATAACGCATTTAGAAGGTTGAAACAAAACGAGAAATAAAAAGACGCAGGGGACTGTAGTGAACCCAAAAAGTTGAACTTTTTATTAAGCTACTTTCATTAAAGCAAGATTTCTGTA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAACTATGATCTTTTAGAATGAAGTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //