Array 1 82384-81358 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSVL01000003.1 Ligilactobacillus salivarius strain FJLHD24M1 Scaffold3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 82383 36 100.0 30 .................................... AAAATGTGTGCGTTTGTGGCTGATATGGCT 82317 36 100.0 30 .................................... TAAAGCATAGATCTGCTCATCAGTTAAACT 82251 36 100.0 30 .................................... GCACCTTCGTTGTGGTTTGTGTAAGCATAT 82185 36 100.0 30 .................................... GATTTGCATGAATAAAATATTCGTAGTTGT 82119 36 97.2 30 ......A............................. CAAAGGAGGAAGCACCCTTGCAGGCGGATC 82053 36 100.0 30 .................................... CGTTGTTTCTAGTACAGATGCAACAGGCAA 81987 36 100.0 30 .................................... ATTAACATACAATAAACCACAAAAGGATTA 81921 36 100.0 30 .................................... AAATCGTAAAGATATCCAAGTACGTTGGGT 81855 36 100.0 30 .................................... AGCACTGATTAAAGATGCGTATTATAGGGC 81789 36 100.0 30 .................................... ACGTCAGTGTCAATCGCGATAGCCTGTTTA 81723 36 100.0 30 .................................... TAGACAATTGGTCTTTATGTTCACCGTATT 81657 36 100.0 30 .................................... AGAGTACAAAGCTCAAGTGCTTAAGGATAG 81591 36 100.0 30 .................................... TGGTTTGAATACTGGTTTAAATTCAACATT 81525 36 100.0 30 .................................... ACAAGGAAATTAAGTTAGATAAGTAACACA 81459 36 100.0 30 .................................... ACAACTGGAGTTTGAGTACGTTTAGCTTGT 81393 36 80.6 0 ..........A.........T...AG...CG..G.. | ========== ====== ====== ====== ==================================== ============================== ================== 16 36 98.6 30 GTTTCAGAAGTATGTTAAATCAATTAGGTTAAGACC # Left flank : AACAGACCGAATTAGTAAAAAGTATATGAATGTATTGATCAAGAAGATTATTGAAGACATCACAGATGATGAAAGACAAGCAATACTAAAATCAGTAAATAGTTTGTATGATCGTATTCGTGAGATTTTGTATAAAATTGATATACCCTTACAAGCAGATTATGATAATGATTTAATAAGACTATTCAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTGCATGTGGAACTAAATAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAGGTCTTGTTAAGGCGACTAACTCATCAGTGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAGCTGTGATAATTACTATATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAGTAACT # Right flank : TAAAATACAAAAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTAAGATATATTATGGTTGATAATGTAATATTATATGATATATAATATAGTTGAAGATAAGATATAAAAGAAAGTGAGGGATGATGATGAAAATTCAAGTTAGTTCTGATTTACTAGATGGTTTAGTATTAGCGCTTTTAGATAAGCAAGATTATTATGGATACTCATTGACACAGGATATGCAAAGAGCAATTTCAATTTCAGAATCAACACTCTACCCAGTATTACGAAGATTAAAGAATAATGGTTTATTAGAAACATATGATCAATCATATCAAGGAAGAAATCGTAGATATTATCGCATAACAAATAGTGGGGAAGAACATTTAGGAAGAGTTAAAAAAATGTGGAGCGACTACAAAGTTAGTTTAGATTCAATTTTCGAAAAAACTAGGGAGGGGGAATAATAATGAACT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGTATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //