Array 1 480656-481576 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849991.1 Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 strain CIP 70.34 acLsi-supercont1.8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 480656 29 96.6 31 ............................G TAACGCTGGTACTCTGTACGTTCTACGTTAA 480716 29 100.0 31 ............................. TCAAGAGAAGTTTTATAGTGTTCGTGTATCT 480776 29 100.0 31 ............................. TTCACTGGATTACGTTCTAAGCCTTCCTGAA 480836 29 100.0 31 ............................. ATAAGCCTTATGAGGTAGATACTTCAAAAAT 480896 29 100.0 31 ............................. ACTCGGTCACAAGGCGTAGTCTACGGTTTTT 480956 29 96.6 31 ............................G TATCGATACGCCAATGAAGCTATCAGAGTTC 481016 29 96.6 31 ............................T CAATTGGAACGATATCAGGCTAATAACTACG 481076 29 96.6 31 ............................G GTACAAGCCATCACATGTATCTGCTAGTTCA 481136 29 100.0 23 ............................. ACACATGCCAGATGGTTCAAATG Deletion [481188] 481188 29 96.6 31 ............................G TATCGATACGCCAATGAAGCTATCAGAGTTC 481248 29 100.0 31 ............................. GTAGGAAGCTCTACATCTAGTTTTAAATAGG 481308 29 96.6 31 ............................T ATGAGTGAGGGAGTAGCAAATGTCTGAACAA 481368 29 100.0 31 ............................. AGAAAGCTGAGCAATTGCCTGCTTTGCCTAT 481428 29 100.0 31 ............................. ATCCCATTAAAGAAATCATTTTGGTCTTGGA 481488 29 100.0 31 ............................. AGATCAGAGGCACCAAGCAATGCAGACTCCC 481548 29 96.6 0 ............................T | ========== ====== ====== ====== ============================= =============================== ================== 16 29 98.5 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCAAGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGAATTAGTTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCGGACCTAGTTAAAGATGCTTTTGTTATGCCAGTCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACATTTAACCCAAATACCTTATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTACCCTTGCCATGCTTGCCAGAATTAGAATGTTCTTCATCGCATAGATGATTTAGAAATACCACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.03, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [81.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 482178-484804 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849991.1 Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 strain CIP 70.34 acLsi-supercont1.8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================== ================== 482178 29 96.6 31 ............................C AATACAAACATTTGACTGCACATCTGGAACA 482238 29 96.6 31 ............................T AGAAAGCTTGGAAAACAAAGGTGACTGTAAT 482298 29 100.0 31 ............................. GAAACATCTGTTATTTTTATTGATGAGGTAC 482358 29 100.0 31 ............................. CCCTTTGGATTGAAGACTCTGCTTTTGCTGC 482418 29 100.0 31 ............................. TTCACCAGCCTCGGCTAGACTTGATGCTCCT 482478 29 100.0 31 ............................. AGCAAAATTCAAAAGAATTACCCCAGCCAAG 482538 29 96.6 31 ............................T TGGTGTGCCTGCGCCCACTCAAGCCATGATT 482598 29 96.6 31 ............................T TTAACCGAGATCAAGAAGTAATTGCTTGGGC 482658 29 96.6 31 ............................T ACAATACGACGTGATAATGCAACTAAAGCCC 482718 29 100.0 31 ............................. CGGTAAAATTAAGTTACCTGCTAAACTTGTG 482778 29 100.0 31 ............................. ATCAAAGCCTTAATCGCTAAATCAACTGCTA 482838 29 93.1 31 .............C..............T TTTGTTTATACGGTTAATAAATCAGTACAAT 482898 29 100.0 31 ............................. TTACACAGGCATGGCAATGAAAGTGTTCTTT 482958 29 96.6 31 ............................C CTCGTGGAAAAACTTAAAAGCCATCTTCGTA 483018 29 96.6 31 ............................T TCATCTAAATGTTTTTGACGTTCAGCTTCAG 483078 29 96.6 31 ............................T AGACAGCTCATTTAATCCGGGTGAGAAACAG 483138 29 96.6 31 ............................T AGATAATGTTGAATGGGTTGAAACTACCTAC 483198 29 100.0 31 ............................. GTTCAGCATTCCCCTTCGGGGTCAACGTCCA 483258 29 100.0 31 ............................. TTACCCCTCCTTACTTTCTGCTTTAACTTCT 483318 29 100.0 31 ............................. AAACACCAAGCCATAAAATTAATTACAGCAA 483378 29 96.6 31 ............................T GTTTTGCTAATTTATCAATATCGATTTTCAC 483438 29 93.1 31 ...AC........................ CAGGGGTCAAGTTCAGAAGATTTACGTTACA 483498 29 82.8 31 ...GC.......CC..............G GTATTAGTGCGAATTGGCTTTTAGCCCACGC 483558 29 89.7 31 ....C.......G...............T TAAATGCTCAACTATTTCTGTAGCTAATGGA 483618 28 82.8 31 ...GC....T...-..............T TCAAATGATTTAATGAGCTTGTAGCCATTTT 483677 29 89.7 31 ...GC.......T................ CGTCTTCTAATGATGGACTTTAATCCAATAT 483737 29 82.8 30 A..GA.......TC............... TCTCACTGAAGATATGACCATCACTTTCTT 483796 29 82.8 31 CG..C.......CC............... AGCCATTTACTTTGATAAAGCGTCACATAGC G [483798] 483857 29 96.6 31 ............................T AGGAAATTCTATCGGCCCAGCATCTACAAAT 483917 29 100.0 31 ............................. AGAGACACATCGTTAATAATCTCTTGTGCGG 483977 29 100.0 31 ............................. TGAGCAAATTATCAATTGATCTATCTGCAAG 484037 29 89.7 31 ............CC..............T AGACGGTGTTACCTGTAGGCGGTGTCTACTG 484097 29 89.7 31 ...TC.......C................ TCGTTTGAATAATATGGACAATCCAGCCAAT 484157 29 86.2 31 ....G.......TC..............G CAGCATCAAACGAGATATTGGCTAACATATT 484217 29 79.3 31 ...G......A.CC...........C..C AAATAGTTTTAGCTATCTGAGCATTTAATTT 484277 29 89.7 31 ....G.......C...............T TCATCACGTAGCCTTTTACACGCATCTTGCG 484337 29 93.1 50 ....................C.......T GTACGCTGAGTATTGATATTGACATTCAGGGCATTCAGAATTTGGCGCTC 484416 29 89.7 30 ....G........C..............C CAGTTTGCTGAAAATCACCAATACGGTCTT G [484440] 484476 29 79.3 31 ...TC......TCC..............G ATTCTATGAGCGTGACCATGACTCTATTTAA 484536 29 89.7 31 ...GC.......C................ TTATCCAGATAAAACCATATCTACAAAGTGG 484596 29 93.1 31 ....G.......................G ATCATCTACAGTGATTGAATAAACGGTTTTT 484656 29 82.8 31 ...GC......TG...............C AACGACGACGCCGTGTGTTTGTTATCGGAAG 484716 29 79.3 31 ...GC....T..TC..............C AAGTAGGATTTGCAGCCCCAATAGTCTTTAT 484776 29 75.9 0 ....G....T...C.A........AT..T | ========== ====== ====== ====== ============================= ================================================== ================== 44 29 92.7 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCTTCATCGCATAGATGATTTAGAAATACACGGCGATCTTGTTTAATAGTCTGAGTTT # Right flank : TTTGAATCTTAAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGCTTTTTCGAATCTTGGTGGGATGGCGTCAATTGAACTGATAAAACAAATAATTGTTTTTTAAAGTTAATTTCAATTCAAAAAATAACAGTGTACACAATAGTGTACAAATTATTTGTTACTAGGGCATTTCTCTGAGTTTAGTTGTCATGCTGGGTGACGAACTCAGGAGTTAAAAACACTCCTTTTAGTGGATCGGATTATGAGGCTCGTTATTTGGCTTCAATAAATTTATTGAGCGCAAAACCATATTTGGTGATTGGATTTTAAATCTTGAATTAACTTAGCCGTTCAAGTGGCTGATTAAGTAGCTTGGTCGCGTTTTAAGTGTGAGCAAGTTATAAAAATCACGAAATACTTTCGATTGCAGATACGTGCATCCAGTCGCGTGTACATTGCCGAAGTTGAGGATTTAGATGGTGGGGGGTATCCCTATGTTCAGGTTATTTGCAGAAGTA # Questionable array : NO Score: 5.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.64, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.35, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-43] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //