Array 1 58011-61595 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMTM010000037.1 Bacteroides intestinalis strain D55t1_190419_C2 NODE_37_length_64858_cov_15.7714, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 58011 47 85.1 30 .....A.....T......C..T....T...........A.......C CTGTTGGCGTAGATACGAATATGCTCGATT C [58025] 58089 47 95.7 30 ...........T.........................A......... GCCCGCTCCCCCGCCTTGCCGCCACGACCG 58166 47 100.0 30 ............................................... TTTACCGGTAACATAAGTCTCTGCCACTAA 58243 47 100.0 30 ............................................... ATTGATAGACTCCAAACCTGTGAAGAATCT 58320 47 100.0 30 ............................................... GCCGAACTAAAGATACGCCCAAGATGCCAG 58397 47 100.0 30 ............................................... GTAACCTTCAGGAACTACATAGCCTTTAGG 58474 47 100.0 30 ............................................... AGCTCCTTATATTGGTGATGGTCGCACGCT 58551 47 100.0 30 ............................................... TCTAACTAATACATAAAAGATAAATATGAT 58628 47 100.0 30 ............................................... AGTTGGAAGAAGAAGCATCCCGAATTTCTT 58705 47 100.0 30 ............................................... CAGTTTTTCCGAAGATGAAAGAAAGCGTTT 58782 47 100.0 29 ............................................... ATCAAAAGAATGCAAGCGATTCCGCAATA 58858 47 100.0 29 ............................................... CAATATAACATATAAATAGATTAAATATA 58934 47 100.0 30 ............................................... AGTTATATATATATCAACAGTAGTTTGCAA 59011 47 100.0 30 ............................................... GAAACGACCTATCAAGTGAAAGCCCAGTCT 59088 47 100.0 29 ............................................... TTTGGGTGGTGAACTGTAAAGGCGCTAAA 59164 47 100.0 30 ............................................... GTCTTGTCGCGTGCCGCTTCAATGGCTGCT 59241 47 100.0 30 ............................................... AAGACATGAGCCAAGTCCTTATCAGTAATG 59318 47 100.0 30 ............................................... CTCACCGCCTTTTTTGTGCCTGGGCGGTTA 59395 47 100.0 30 ............................................... CCATGATGGAGGATATGTATATGCTTATAT 59472 47 100.0 30 ............................................... GCGAATGGGACCATGAAAGAGATGCGCTGG 59549 47 100.0 30 ............................................... AGAAGCCTTTACACGAAGAATGGCATTTTC 59626 47 100.0 30 ............................................... TCACGTTAAACCAAGGGGAACAACTAATTT 59703 47 100.0 30 ............................................... TCAAATTATTGAAAAAAGAATCACCATTTT 59780 47 100.0 30 ............................................... TACATCCCGGTGTAGCGTGATTGCTTATCC 59857 47 100.0 30 ............................................... CTCTTCACAGGTGTTGGACATTGCGAAGTC 59934 47 100.0 30 ............................................... TACTGGAACAAAATCCGGAAGGACTTCCCG 60011 47 100.0 29 ............................................... TGCAATGATCACTCCGTCAATATGTGTTT 60087 47 100.0 30 ............................................... GGACGGGCAGTCTTCGCCTACCGCCAGCTT 60164 47 100.0 30 ............................................... AATCACGTTAAAATACTCAATGTGGTACAG 60241 47 100.0 30 ............................................... TCATGGCAATGCACACATGGTTTATATGTA 60318 47 100.0 30 ............................................... CTCGGCAATCGTATATGTGTCGGACTTCAT 60395 47 100.0 30 ............................................... GTCGGTTCTCGGCTTTGCTTTTCAACAAGC 60472 47 100.0 30 ............................................... GTTTGTACACTTTTTCGTGTACTTGCACAC 60549 47 100.0 30 ............................................... ATGCTTTGGTTGCGCCAAGGTACGTGTTGA 60626 47 100.0 30 ............................................... GCAATGCCGGACGGTTCGCCTATCTTCACA 60703 47 100.0 30 ............................................... CCTTTCTGAGAAGACACCTCGACACTAATA 60780 47 100.0 29 ............................................... CCCTCGGCCTCGATTGTGATTTTGTCACC 60856 47 100.0 30 ............................................... AAAACATAATCATATCACCTGCACTTATGT 60933 47 100.0 30 ............................................... CACCGTTTAGTAGGTCAGTGATGCCGTCCA 61010 47 100.0 30 ............................................... ATGATTAAATTTATTAAAAACTTGGGTTTT 61087 47 100.0 30 ............................................... AGATCGTGCTACAGGTACTGAGTGGAGATG 61164 47 100.0 30 ............................................... GATACCGCGTCAAGTGATGGCGGAAGACCA 61241 47 100.0 30 ............................................... TATAAACGCCCCCCAGCCACACCTGAAGTT 61318 47 100.0 30 ............................................... AAAAACGGGTGAAGGCTATGCCTTGCATCA 61395 47 100.0 30 ............................................... CGCGTCAAGTGCATGGTTCCACGCGTCTAT 61472 47 100.0 30 ............................................... TCGAGATGTGCAGTGGTGCTAACATGTACT 61549 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 47 47 99.6 30 GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGT # Left flank : CGTCTCAATATCTTCGAATATACTTTCGACGAGCATGATGAGACGGTAGCTTATTCTCTGTCTATTCCTTTTGTCTCTACGTTTGTTTTTGCAGCGGTGATGAAACATCAGGAGGCTCCGGGTACTACGTTCAAGAAGCATATGGCTATTGCCAAGGGTTTGCTGAGTGAGGATGATTACTTGCTTCAGGAAATTCTCTTTAATCCGCGCACTCCCTCGCAAGTGGAAAATATTCGTCTGGAGCTAAAAAATTTGCTGGAAATTATCAGTACGAAGGATGCGGAAGGGATGAAGCAGTATCTGACGAAGATTAGGGAGAAGATAAAATAGATAGGTGAGATTAAGGGATTGAAGAGAGGAGAGGTACGGAAAAGGAAGTGGGGCTTCTCTCTTCAATTTGTTAATAAAGAGAGGGGATGATATTTAGGATTGGGGGGAGCATACTTATTTCTAAAATTATTGAAAATAGTCAAATATAGGCAGGAATGAAATAAAATTCT # Right flank : TACAACCTACATTACAAATTGATTTTCAATTAGTTATAAACCGTTTTTGAAATACAAAAACGATGCTGTTTTCAATTAAGAATCCCACATTTAAGTGGGATTTCTTTTTCTAGAAAAGCTCTAATTGCTGACCGGGAGTATTTATATCCAAAGATTTTTTCCCATAAAACAACTCTATATTTCCAAATTGCTTATCTGTAATACACATAATTCCAACCTGCCCATGCTCCGGCAAGAAAGATTTAACTCTTTTTATATGAACTTCTGCATTCTCACTACTAGCACAATGACGAACATAAATAGAAAACTGAAACATAGTAAAGCCATCTTTCTGCAGATTCTTCTTAAAATCTACATATGCTTTCTTATCCCTCTTTGTTTCAGTAGGCAAATCAAATAATACAAGTACCCACATAATACGATATTCACTAAATCGGTTCATCTCACATTTCCGGATATAATATTCTACGCAATTCACCACTAAAGCATTTATACAAAGA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.30,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //