Array 1 58594-59620 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JADMFF010000001.1 Enterococcus faecalis strain U1909178 NODE_1_length_581545_cov_29.337583, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence              	Insertion/Deletion
==========	======	======	======	=====================================	=============================	==================
     58594	    37	 100.0	    29	.....................................	TGAGACATCAGCTTCACTCTCTTTCTGAT	
     58660	    37	 100.0	    29	.....................................	ACGTAAACGGATATTAGTGCGAATGCACA	
     58726	    37	  97.3	    29	....................................A	TAAAATTATTCGATTAAGTAAGGCATTAG	
     58792	    37	 100.0	    29	.....................................	CACTCGTAGGTACATATTAGGATAATATG	
     58858	    37	 100.0	    29	.....................................	CAATATTAAGATTAACGAAACTAATAAAT	
     58924	    37	 100.0	    29	.....................................	TATATTGAGTCACGTCCGAGAGTTTACGG	
     58990	    37	  97.3	    29	....................................A	ACAAATTCATCTATTGTTTCGCAATGTTC	
     59056	    37	  97.3	    29	....................................A	AAATAAATGGAACTCATAGTAAGAGGGTT	
     59122	    37	  97.3	    29	....................................A	GTGCGTTTCAACTCTGTTACGTCAAGTGG	
     59188	    37	 100.0	    29	.....................................	TCCTCATTTTTAGACAAGTTCATTGCCAC	
     59254	    37	 100.0	    29	.....................................	GCACCGTCAACGTATGTTGGGAGCTCGTA	
     59320	    37	  97.3	    29	....................................A	TGTTGAAGTAGAGCGTGATGCAATCCTAA	
     59386	    37	  97.3	    29	....................................C	AATTTAAATTAGCGTATATGATGATTAGC	
     59452	    37	 100.0	    29	.....................................	GGTGAAGATGTTGATTCTGGATTATCAAA	
     59518	    37	 100.0	    29	.....................................	GGGTTGACTAAAGAGCCGTCAAAAGTTTT	
     59584	    37	 100.0	     0	.....................................	|                            	
==========	======	======	======	=====================================	=============================	==================
        16	    37	  99.0	    29	GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT	                             	       

# Left flank :   CATATATCCTTATCAAGTAGTAAATGCTTCTTTTGACTTTCAAGAGGGACGAACAACAGAAGGTGGAGAAATGACACACATGATTGGCTTTGCCACTTCGCAAGAAAATACCTATGAAGATTTGGAGCAACTAAGCGTACCTGCTCATACATGGGCGGTTTTTCCAAATGAAGGTCCTTTCCCACAAACTTTACAAGAAACCTGGGCAAGGATATTCTCTGAATGGTTGCCTTCATCTGGTTACCAAGTCGTTGCAGCACCAGAAATTTCGTTTACGCAATATCAAGGACCAGCAGAAGCTAAGTATAGTGAAATCTGGCTCGCTGTTACAGCTACTAAATAAAGAAAACCCACCATTGAAAAATGGTGGGTTTTTCCGCCAAGAAGGAGAAAGTTTGGTATAATAAACGTGAAGAAAAAAATCAGACCTTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAATACGGAATCATGGAGAAAAAATAATTCTCCGAG
# Right flank :  TCAAGAAATTGCATTAAGTTCAAAAAATTTGTTTTAGAGCCATGTTGTTAAAAAACAAACTATCACCACAAGCAATCCGTAATTTTCATCACAAGATTAGAATTTTTATCATCAAAGACGAGCTGCTTCGATTTTCGAAAACTAATCAAGTGATAAGTCAAAATGTTGATAGATTGAGATTAGTTCTTCCTTTTTTTAGGAAGGGCTTTTTTTATTGATAGAAGAAAGGGAAGAAATCTTGGGAGCACCTAAAAAAATTGTGAGAAATGCTTCTGTATTGTTTGGTTTCTGCCTCAGAAAGTTGTATACTTAGATTGGAATTATTCTATATTACATGCATTTTCACACTTTTTGGAAAAGTTCACTTGAATTTTCTTTTAGTTTCGTAGATAAAAGGAGTCATCGCTAATGGAAATGAACAATTCAGGTAAGCTTGTTTCTTTGTGTGGAGGCAAATCAGGGAGGAAATAATATGTTTGATATTGTAACATTGGCGAGAA

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:66.67%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [63.3-75.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0.27   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//