Array 1 84777-86756 **** Predicted by CRISPRDetect 2.4 *** >NZ_NIGU01000003.1 Lactobacillus acidophilus strain BA05 contig000003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== =================================== ================== 84777 27 100.0 34 ........................... TAAGAGAAAACGGTGGTTTCCTCTTATTTTTATG 84838 27 100.0 34 ........................... TAAATCCGGACAACGCTTGCCACCTACGTATTAG 84899 27 100.0 34 ........................... TCATTGAGACACACATTGCGACGACTAAACTCTG 84960 27 100.0 34 ........................... TTTTAATGAAAGGTGCTAGTTTTGTGACACTTTG 85021 27 100.0 34 ........................... TGATTTTCCAGATTCGGCTACTATTTTGGCAGAG 85082 27 100.0 34 ........................... CTTAGGCTATTCCGCACACAATATGTGGCGTGGG 85143 27 96.3 34 ..............A............ TGACTGCAATGCAAGCAAGAGCGGACATAGCAAG 85204 27 100.0 34 ........................... CGTCATAAATTAGCTTTCTGCCCTTTTGCGTCCG 85265 27 100.0 34 ........................... TGCTGCTACGAGCGCTTTTGGTCACATTAAAGAG 85326 27 100.0 34 ........................... TCATTGATGCACCGGTACTTAACTCAAATCAAAG 85387 27 100.0 34 ........................... TGACTACGATATTTTCTTTTAATTATATCTTGGG 85448 27 100.0 34 ........................... CAATATCATCAGCATTTTTCACACCAGAAAATAA 85509 27 100.0 34 ........................... CGATTTGCGTGGCAAATGAATGGTTGATCTTGAA 85570 27 100.0 34 ........................... TATTCTTTTTCACTATCAAAATCAAATATTTCTA 85631 27 100.0 34 ........................... CACAAAAAAGCCACCTAGAAGATAAAATTCTTCA 85692 27 100.0 35 ........................... CCTTAACTAGTGCAAATTTAATATTTGGATAGCTA 85754 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 85815 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 85876 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 85937 27 100.0 34 ........................... CTTTGGCCATCTTCGGTCTTAAACTTAGCTAAAA 85998 27 100.0 34 ........................... CGGGTAAACAAGTCAGAGTTACTCGCAGCAAATA 86059 27 100.0 34 ........................... TTAGGCGAAACCCCGAGAGCAATTTCAAGCACGA 86120 27 100.0 34 ........................... TAAAACGTTGAAGCTTATTGTCCGCTTTAACGTA 86181 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 86242 27 100.0 34 ........................... TGGGTACCGAGGGTGGCAATATCTTCCTTATTTA 86303 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 86364 27 100.0 34 ........................... CGGAATGTATGATAAAAATTGGCTATTTGCCTAA 86425 27 100.0 34 ........................... TATTGATGCAACACCTAGCGCAAGTCAACCTGGA 86486 27 100.0 34 ........................... CAGGGTGGTTTTAAGTACGAGATTGACTACGATA 86547 27 100.0 34 ........................... TGGCGAGAAGCTTATGAAGATCCTAGGAAAAGGA 86608 27 100.0 34 ........................... TATATGCGACTTATTTCTTACGATGAGATTCCAA 86669 27 92.6 34 ...........A.A............. TCGATGGTAACTCTGTAGCTTTTAGAGCCTTTTA 86730 27 74.1 0 ....T..T.T.A.A........A.C.. | ========== ====== ====== ====== =========================== =================================== ================== 33 27 98.9 34 TTTTCTCCACGTATGTGGAGGTGATCC # Left flank : CGTGGTTGTCTGCAGCAAAGGCTATCCAACGCACCCAGCACCTAATGTTAAGATCGGCAAGCTGCCTGAAGGTGCTAATACCTATATCGATTACGCCAATGTTAAAGGTGATTTGGAAAACTTGACGGGTGATGGTGGCCGCTTGTTCATGGTGATTTCGGAAGCTGACAATTTAGTTCAGGCACAAGACAATGTTTATTCTTATTTAAGTAAGCTTGATCTGCTGGATTGCTTCTACCGGCATGATATTGGTAATCGTGCTTTGGGAGATTTTAATATTATATAATGTCTTAACTTAATGACATTGATAAGGCTACCCATATTTTGTTTATTTGTAATCCTGTGAATATAATAGCAATTTAAAATTATTATATGAGCTAGATATATGTAGAAGAATATTTGATATAATTGTGTCGATGATTTGGTTGGGGAAATGCAAACTAAAGAAATTTTGCTTTTTAGTAAATTTAAAATAGCTTAACGATGGGATTCCTTTAGTG # Right flank : CTGAAGCACAATATTTTTAAAATAATTGGGCAAGATTTTCTCCAAAAAAGTGGAGCTACATTAACGCAGTGAAGGAAAGATCACAAGAAAAAGTCCCTAATCAGGGCTTTTTTCTTTTCCAAAAACAACATGCTGAAATAGTGTACCGTAAACTGGTAAAATAGATAAGTAAACATAGATCAATTAATAAATAAGGGGGAATAAAATGGCAGATAAAAAATTACTTCTAATAGATGGAAATTCAGTTGCTTTTCGTGCCTTTTATGCTTTGTATCGGCAACTTGATCGCTTTACTAGTCCAGATGGGTTGCACACTAATGCGATTTTTACCTTTAAAAACATGTTGGATGCCATTCTTAAACAAGTAGATCCAACTAATATCTTAGTTGCTTTTGATGCGGGCAAAGTTACTTTCAGAACTGCCATGTATAAAGACTACAAGGGCGGCAGACAGAAGACACCTAGTGAATTGCTTGAACAAATGCCTGTTATTCGTGAAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTCTCCACGTATGTGGAGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //