Array 1 15171-18985 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHBA010000016.1 Psychrobacter sanguinis isolate Psychrobacter sanguinis 92, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 15171 32 100.0 33 ................................ CCGATAACCCCCGGTCACACCCCAGTGACAAAA 15236 32 100.0 32 ................................ TACCGCTGAACAGGCAGGTCTTGAGTTTAAAA 15300 32 100.0 33 ................................ AAGCACTACTTCAATATATTCAAGAATATTCTC 15365 32 100.0 32 ................................ GCTGACGCACTACGCAAAGAAAGGCGGCAGGG 15429 32 100.0 34 ................................ TTAGGTGACGGCAAGCTAACAAGCGAAGAAGCAC 15495 32 100.0 34 ................................ GGCGGATTGTCTGGCAGTATCGCCACAAATGAGC 15561 32 100.0 33 ................................ AATCACAGCGCGGCCATTGTAAACAGTGATAGG 15626 32 100.0 34 ................................ ACAGTAAAAGGCGCAAGTCCGGCTATGAGCACCC 15692 32 100.0 34 ................................ TGCAAGCTCTTTAGTGTACATATCAGCCCATTGT 15758 32 100.0 32 ................................ ACAGAGTCAGAGTGTAATGATGAGTAACACTC 15822 32 100.0 34 ................................ TCACCTTCAATCTCTGCATCATCAGGGATGTCCT 15888 32 100.0 34 ................................ TATCAGATTGCTCGAATGATTGGTGTAAAAAAAA 15954 32 100.0 33 ................................ AGATACAAGTTGTGCTGCTATATCACCTGTATT 16019 32 100.0 35 ................................ GCCTTTGACCCAGCTACTCCAGTCACCCTTAAAAC 16086 32 100.0 33 ................................ TCTCTATCGTGTCCAACAACCTGTCGCTCTGGC 16151 32 100.0 33 ................................ CCTTTAACGGCTCTCCAGAGGCGTGCAACAACC 16216 32 100.0 33 ................................ TCTACATTGGCATGCTCGCCTGCAAAACCATCT 16281 32 100.0 33 ................................ AGGATTGTTAGCGTCAATCATGGCTTGAACTAT 16346 32 100.0 33 ................................ CTATCTGATGGAACACGCTTCAATCTCACCCTT 16411 32 100.0 34 ................................ TAACAATCTCTAAGCAAGCGATATATTTATTACC 16477 32 100.0 33 ................................ ATGCAGGCTTCTTTGAAGGCGAGAGTGTGGTTA 16542 32 100.0 32 ................................ ATGCAAAAGCGGTAGTGTTGACGTTGCACTGC 16606 32 100.0 33 ................................ TGTCGATCAATGGCCGAGAAATCACTGTCAGCA 16671 32 100.0 34 ................................ GGCGGATTGTCTGGCAGTATCGCCACAAATGAGC 16737 32 100.0 32 ................................ ATCACAAAATGCAGCTAATGCCATGTGTGCTG 16801 32 100.0 34 ................................ TTGTTTTTGATTATTGTTGCAGCAATGCTTGTTG 16867 32 100.0 35 ................................ TGCAGTGCACCTTTATGCGCGCGCACACCTTGCAC 16934 32 100.0 32 ................................ CTTGTACATCAGGCAGGGTAAGGTTTACTGGT 16998 32 100.0 32 ................................ CTGTTGACAAAGGTGATGAATGTTTGCTTGTA 17062 32 100.0 33 ................................ AATAGATGCGGGTTTGTATTTTGTAGAGTTTGC 17127 32 100.0 34 ................................ TAATAACTGTCATTTATCTGAAACAGGTGGCAAG 17193 32 100.0 33 ................................ GTTTATCGTGAATGGTGTAGACGCCAAGGCGAA 17258 32 100.0 37 ................................ CTATGCGACCGATTGTTGAGAGCATGGGGTTAGCGTG 17327 32 100.0 33 ................................ GATACATTCGATGCCGCTCGGGTGGCTTGTGTA 17392 32 100.0 35 ................................ CATACAGTGCAAGTGTCAACGACAGCAGAAAACCG 17459 32 100.0 35 ................................ CTTTATAACTTTAACGGGGTAGGCATTAAAAGTGG 17526 32 100.0 33 ................................ AGGCGTACTGTAGACATCGAGACCAGTTGCAAA 17591 32 100.0 32 ................................ TTGGTTTTAGTATCTGCTAGTTCAGTTAGATA 17655 32 100.0 32 ................................ TTGCATAATAACAGATTGACATGCTCCCACCA 17719 32 100.0 32 ................................ TCCATTCACAGTCTTCGTAATTAGAGCTGATA 17783 32 100.0 34 ................................ TGTTGACAAGCAGTTAAATGTTGCACCAAAAGCA 17849 32 100.0 33 ................................ ACGTCCTCAACCACTCGCTCACCTGTCCTAGTG 17914 32 100.0 32 ................................ ATGCAATCGCTGCATAATCAGAATCATCGGCG 17978 32 100.0 32 ................................ GTCAGCTCTAAATAGCTGCTGCAATTTGTCGG 18042 32 100.0 33 ................................ ACTGTAGATTGTTGGCCTTCCGCCTTTATCTTT 18107 32 100.0 34 ................................ TGTTTTAATGCCACTTAAAGTCATATTGCGGTCA 18173 32 100.0 32 ................................ TTAATCTTATGGCTATCACAGGGGTTCAAGAC 18237 32 100.0 33 ................................ ACGCCTACGCACAAGGCCGTTTAGAGTACGACC 18302 32 100.0 34 ................................ GGGCAGCTCAATGTCTTTTAGCTTAACTGAGCGT 18368 32 100.0 33 ................................ TCAACAACCTTCCATAGCTCGGGCTTGGTAAAT 18433 32 100.0 32 ................................ TTGGACAGTCAGCAAGGCATGCCTTTTTTGTG 18497 32 96.9 33 T............................... GAAGAAAAAAAGATTAGAAAGCGTTTAGCATTA 18562 32 96.9 34 T............................... ATAAGGCGTAGCGGGCAGCCCTCCGCTCTCAAAT 18628 32 96.9 34 T............................... TAGTCCGTTAGTACGTACGGTGTAGTATTTACTA 18694 32 96.9 34 T............................... ATTTACGCAAAATTCAATGTCATCAATAGCTTTG 18760 32 96.9 32 T............................... GCCAGTGATTGCTTCGGTGGCATCGCTACCAA 18824 32 96.9 33 T............................... TCATAAAATCATCGGCCCTTGCTTTGTTGGTAA 18889 32 96.9 33 T............................... TACCAATAGATCAACCAAACGAGAAAGTCCTTT 18954 32 96.9 0 T............................... | ========== ====== ====== ====== ================================ ===================================== ================== 59 32 99.6 33 GTCGCACCCATCACGGGTGCGTGGATTGAAAC # Left flank : AAACACTGCTTAAACTTTGGTCAACGGGTGCAATATTCTGTATTTGAAATTGAAGTTAACCCTGCGCAGTGGACGACACTTAGAGCCACCTTGGAGGGTATTATCAACCCAGAGACCGACAGCTTGCGTTACTACTATATGGGCAAAAACTGGCAACATAAGGTTGAGCATATTGGTGCAAAACCTGTGCTGGACCTTAATGATGTGTTACTATTTTAAAGTGGTATTATGAGAAATTATTTGGGGCTATTACTTAAAGTGAACCTGTTATTTTCTTTTAGTTGGTTCTCTTAGTTCTTTTGCGAACCCTAAGCACTCATAAAAACCCTAGAACTCTCGCAACCCATGCACAATACTATTTAACAACATGATTTTAAACACTTTATTGTCTTACGTTACTCATTTGGCAGATGTCACGTTTGCCAAATTCGCCTATGTTTTACACGCTCGCAGAGTTCAGGGTATTAGTCTAACCCAATCAGCGACTTAAACCATAGGCG # Right flank : CGCACCCGGAATTAAAGAATCGGTGGTGGTTCAAAAATTAGGCTGAAAAAAACAGGCTGAGAAATTGATAAAATAGTGACATGCACATCACACTCTACATCAAATGCCCAGCCTGTCTAAGTCACAGCATAAAAAAATGGCTTCAAAAGCTATGCTAAACAAAACTATAAATGCACAGACTGTAAACGGCAGTTTATAGGTGATGATGCCTTAACCTACCAAGGCTGTCACTGCCAAAAAGATAGCAAAATACGGCATCTTATGGTACGAGGCAGTGGTATAAAAGACATCGCTACAGTTGAGAGAATCAGCAAAGGCAAAGTACTAGCTACCCTAAAAAAGTGTCACTACCAAATAACGCCCAAACAAAGTCAATACGACTGTCTTGAAGTTGATGAGCTATGGACATTCGTAGGTAAAAAGACCAACAAGCAATGGCTAATTTATGCCTATCACCGTAAAACAGGTGAAGTTGTTGCCTATGTTTGGGGAAAACGAGA # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCATCACGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTCACGGGTGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.90,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 1061-3105 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHBA010000057.1 Psychrobacter sanguinis isolate Psychrobacter sanguinis 92, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1061 29 100.0 32 ............................. CCCCTGCATACTTATGCTGTGATGCTACTGCT 1122 29 100.0 32 ............................. TCCCAGCAACTGCTTAATTAGCACACTGCCAG 1183 29 100.0 32 ............................. CGGTGCGCTGCTTATAGGCTCTTGATTAACCG 1244 29 100.0 32 ............................. CGACTATTCTGATTGGCAACCTGCGTGTTGTA 1305 29 100.0 32 ............................. AGATACCTAGCAGCTCAATTGACATGATTTTA 1366 29 100.0 32 ............................. TCTTTAATGTTTTGATTGTGCAAATAGATACG 1427 29 100.0 32 ............................. CTGCGCAATGCAACATTTGGTTTTGAGTTAAC 1488 29 100.0 32 ............................. CCACAGCTGGCGGCAAGTCATCGCCTTTGATT 1549 29 100.0 32 ............................. ATTGATATCTCTACCGCCACACAATGACAACC 1610 29 100.0 32 ............................. TTAAACCCATTTGAGGACTCGGCTACACTCCC 1671 29 100.0 32 ............................. CTCATGGCTACGGTTGAGTTGATAGATGGAAA 1732 29 100.0 32 ............................. TCTGCAACACCGTTGGCTTGTCCATTGTGAGT 1793 29 100.0 32 ............................. CATTGGCACCAGAGTCCTTAGCCGAGGGCTTA 1854 29 100.0 33 ............................. CTCACCTGTTGCCTGCCGAAAATGATTTAATGA 1916 29 100.0 32 ............................. ATTGACGACCCACAATTCTTAGGGTTGGTCTA 1977 29 100.0 33 ............................. TGGGCAATATATTTTTTAATAGCTTGAGTATCG 2039 29 100.0 32 ............................. ATTATGAAGATGAGATTATCGCTCCAGCTGAT 2100 29 100.0 32 ............................. TGAGGCGGATCAAACACAACCATGTGAAATTG 2161 29 100.0 32 ............................. TATTGAGTGTCGCTTTTTGATGCTGGCTGTAT 2222 29 100.0 32 ............................. CGATTTGAGCGAACAAAAAACCAATTCCTATT 2283 29 100.0 32 ............................. TGACCGACTACGAGCCTAAGCGTGAAGGAGGG 2344 29 100.0 33 ............................. TTTGATTTAGATCTAGCTGCTATTGTGCATGAC 2406 29 100.0 32 ............................. TTCTTGGGCACCATTTCAGACGCTGCTAACAT 2467 29 100.0 32 ............................. ATTGCTAAATTACTCATAATCTTTTGCCTCCA 2528 29 100.0 32 ............................. TGATATGCCAAACCCTAAAGACATAGCGTTAT 2589 29 100.0 32 ............................. GATACCAATGAAACTATCTTATATATTAAATC 2650 29 100.0 32 ............................. GTCAGGTTGATGACATATCAGCGGACGGTAAA 2711 29 100.0 32 ............................. TCACTCATAATTGGACGTTTATCCGGTCTGTT 2772 29 96.6 32 ............A................ AAGATTTTAGTGGCTTCAAGGAAACAGCTGAA 2833 29 96.6 33 ............A................ AAACCAAACTTCTCAAACGTACCTTCAATTTCC 2895 28 93.1 32 .....-......A................ GCACTTTAGATAAGATGCAAAACTATATTGAT 2955 29 93.1 32 ............A......A......... GATTAAAGAATGGCAGTATCATCACTTGGTAG 3016 29 96.6 32 ............A................ AGTTTACATGGTGCGTCAATGCCGGCGCATCG 3077 29 96.6 0 ............A................ | ========== ====== ====== ====== ============================= ================================= ================== 34 29 99.2 32 CTGTTCCCCGTGTATACGGGGATTAACCG # Left flank : ATAAAGGCAATGACATTGCGACTGCGCATCCACCGTACTTGTAGCATCGGATTTTTGCGATGTGTTTCAATCCATAACGCAATATTAATACACACGAAGGCAATGATGAGCGGATAACTCAGCCAGGGCGTAGTCCACCATACAATCCGCCCTTGCACTAAAAATACGCATAGAGCAGCAAGCCCCCCTGCAAAGAATGTAAAACTCAAGATATCGAGTTTTTCAAAAACTTTGTCCGTCTTGCCAGGCGGTAGCTCTAATAGATTGATTAACCCAAAACAAAGCAGCGCCAGACCAAATTGAAACAGAAACAAATTCTCAATATCACCTTCGACCGCCAGATAAGGTGAGACAATACGGGCTAAGGGAGTGCCAAACTGGACTAGGCCAAACCCCAAAATCATACCACTGATACGTTTTGCTACAGGCATACCCTGTAACGAGTAAAAAATCGCCAGTACTGTCATTGCACTGGCAGCAATACCACTGATACCACGAGC # Right flank : GCAACTAAGCTAATTCCTGTAACAGGTGCTAACCTGTTTTCTTTTATGATAAGTCAGACTCTAAATAGCGATTATTTAGAGTCTGGAATACAGTCGAAAATATTCTTTTGCGTCTATTTATTAAAGCCGCGATCCTCAATATAACTATCAAAAATACTTTTCATTTCAGGCTCAAACAACTTGATATAGTCATGAGCGATACCCCGACTTCCACTAGGGTGAGGAAATCCAATCACCTGACACTGCTCAAATTTTTGAAAACTGATTTTAAACCTAGTATGAGTGGATTGTTTTTGTACCATCTGCCTTTTTTCTACAACCTCACCCATGACAGCCTTAAACCTCGGTAACACTTTATCATTTTGAAGGTAGTCCATTAACTTACTACCCATAAATATAATAATCTTTGGTTTAAGTACTTCGACATGATGAATAAAGTTATCAATTTGCTCTGGCTGCAAAAACTTATTTGGATCACTATCTTTTAATGAGTTACCTTG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGTGTATACGGGGATTAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTGTATACGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.30,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //