Array 1 119481-118521 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNJX010000004.1 Pediococcus acidilactici strain 1001295B_180824_F12 NODE_4_length_169865_cov_28.2558, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 119480 36 100.0 30 .................................... GCTTTTTTAATTTAAAATATTTTAATTCTT 119414 36 100.0 30 .................................... GGTTATCGTCATCATCATGGAGAAGATATC 119348 36 100.0 30 .................................... TCTGCAAACAAGGAACGTAAGTTAAAATCT 119282 36 100.0 30 .................................... GCCCGAGTTATCTTAGACAACGCTACATTA 119216 36 100.0 30 .................................... CTAAAGTTAATGACGTTCTTGTAAGTCCGG 119150 36 100.0 30 .................................... TAACTTTTTTAGGTCGTTAGTGGCTACATG 119084 36 100.0 30 .................................... AAATCACCTAAATCACCTGAGCCATTGACT 119018 36 100.0 30 .................................... GAAAAACTAGCTAAACAAAACGAAGATTTA 118952 36 100.0 30 .................................... CCGGACAAGCCCGACAACAGCAATAATCAG 118886 36 100.0 30 .................................... TGGTGTTTTCACCCGGTTTTGGAACACTGT 118820 36 100.0 30 .................................... ACTACAACTTCTACTTCTAAAGAGGTACCA 118754 36 100.0 30 .................................... TAAATTTTCAAGCGCGCCGTTATTGAGTTC 118688 36 100.0 30 .................................... TAGCCATATTCCCTTTTTCTAACTTAATCA 118622 36 100.0 30 .................................... ACTAGATGAGAACAATGGCTTTGAAAAGTT 118556 36 94.4 0 .................G................A. | ========== ====== ====== ====== ==================================== ============================== ================== 15 36 99.6 30 GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Left flank : CCAAGATTTAGTTATTCAAAAGTATTTAACTAAGATTGAACGGGTTTTTGCCGAAGGATTGGTGGATGAGCAACGTAACCAAATTCACGATCAGGTCAACCAACTATTTAATACGATTGCTGAACAATTATTTATGCTAGATTTACCGATTAGCGTCAATTATGATTTTGATTTGAAAAAGTTACTGAAGTATTGTGGAGTGCACTTTGATCCGCTAAGCGTGGGTAACCCGTATGGTATAATTGAAGCGATTTTGAAGATTCACGAGGAGTGCGCGATTAATTCGTGTGTCGTGTTAACTAATGTTGCACATTATTTGACAGCGACCCAAATTGAAGAGCTTACCCAGCTAGTAAGTCAAACGAATCAAGCACTCTTACTAATCGAATTCACAGAAATAGGTAATCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGACAATGACTTTGTTGATTGGCATCGATAATTGATGAAATTTTAGTTAGAAAATAACG # Right flank : TGACTGAAATTAATAAGAGTTAATGTTTTAAGGAAGTTATCAATAGTATTAGTAGTGAACTTTGAAGAATGGAATTTTAATGAAACTACTAGTTACGGAGAATGATAAACTACTAAGGTTCAAATGAATTTATAGGTTTAGCATTATTACTCGAAGACGACGTTTTAGTGGTGGTTGGAAATAAAATCCGCTCGAAATGATCGGGTGGTTTTCAGTTTGTAAAAGTATACCAATATATTGATATAGTAAATGCATAAAGTTAAGAAAGTGATAAAAACTGGATGATGAAGAATAAAAAGGCATCGCAATAAGCAAATGACAATAGTGACACTAATCATTCAGACGATTACAGCTATTGTACAACTCATCACAATGCTTAAAAAATAGGTAAAAGAGGCGATACGTCTCTCTTCTGTTCATCAATTTTAAAATGGAGGCATTAAAATGAAAAACATAGAAAAACTACAATATTTAACTTTGACTATCAGTGTCGTTGCTCT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //