Array 1 1642261-1647855 **** Predicted by CRISPRDetect 2.4 *** >NC_014041.1 Zunongwangia profunda SM-A87, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 1642261 37 100.0 36 ..................................... GACCCGTTTGAAAGCCCTATCGATTATTATATGTTA 1642334 37 100.0 36 ..................................... CAAGTTTGCCGAAGATCATAGTTTAAATAGTTGGGA 1642407 37 100.0 36 ..................................... ACGGCATTTGGCAACAAAGACCACGATGGCGATATA 1642480 37 100.0 36 ..................................... TAGGTGTGCGCTGAATTTTTACAGAAATAAGGTAAT 1642553 37 100.0 37 ..................................... CAATGCTGACGGCAGCTTTAATTTTCCTGAATACAGA 1642627 37 100.0 34 ..................................... AATATCTTATCGGTTGGCCGTGCACCGCGTCCTA 1642698 37 100.0 35 ..................................... CGTACGTTATCCGCATCTTGTTCAAAGAATCTAAT 1642770 37 100.0 38 ..................................... TATCTGAATGTTAATCCGGTTTCTTTTCCTATTTTTTT 1642845 37 100.0 36 ..................................... AGTGTACGTTTGGTTCGTTGTTATTCTCATTATTAT 1642918 37 100.0 36 ..................................... AAAGATTATTCTCTATCCTTGAATATTCTGTAATAG 1642991 37 100.0 37 ..................................... TTAAACAATATATAACACTCCTTCAAAGGGGTTCGGA 1643065 37 100.0 36 ..................................... GAGATGGTTTGAACTTCCTTCATGGCATGCTCAAAC 1643138 37 100.0 39 ..................................... GAAACACTTGCTATATCAAATATTGCAGGGCTTCAAAAT 1643214 37 100.0 36 ..................................... GAATTAGATGATGAAATAGTAGACCTAGACGAAGAT 1643287 37 100.0 35 ..................................... AAAACCGTTCTTCAAAAACCGTTTCCCACAAAACC 1643359 37 100.0 36 ..................................... CCAGATATTACCACTTTTTACGGCTTTTAAGTTGAA 1643432 37 100.0 36 ..................................... GCTATCTCTCCTAATTCTATCGAATCTACTATTTTT 1643505 37 100.0 36 ..................................... TATTTTTCTTCTTGAGCTCTTAAATTTTCTATAACT 1643578 37 100.0 36 ..................................... TCCCTTCTATGATACGGTATATCTTCACAATCGCAG 1643651 37 100.0 37 ..................................... ATTTTTCGGCCTTTCCTAATCAAAAGCACCTCATGGT 1643725 37 100.0 36 ..................................... GTTGCTCTTTTTGTTCTTCCAGATCCTTAGCGGTCT 1643798 37 100.0 37 ..................................... AAAAGTTAGGTTCTATAGGTGGGCTTGCATTGGGATT 1643872 37 100.0 35 ..................................... TTAGATGATAAATTTATTTTCGAAGAAGTAGACCA 1643944 37 100.0 35 ..................................... TAACGAAGCAGTACAGGGAGTCTACTTATATTATG 1644016 37 100.0 35 ..................................... CTTTATGCTCTGTATTAATATCATCGATAAGTTGT 1644088 37 100.0 37 ..................................... GCGATAAGTTAGGATAAAACTGTTTTCCCTTTTCTAA 1644162 37 100.0 36 ..................................... ACGCCGTCGCTTATTCTAGCCGGTAGCTTTATATGC 1644235 37 100.0 36 ..................................... TTTATATGTTTTTTGCGTCTGCATTGAGTGTATATA 1644308 37 100.0 36 ..................................... GTTAGTTTTGATTTTGAAACCACGGGAGTGGATCCG 1644381 37 100.0 37 ..................................... GCCGTAACGCCTTCGTTTCTTCGTGGCCTAAACTCAA 1644455 37 100.0 37 ..................................... AGGAACGCTATTAAATCGTTTCTTTGCTTTAATAGCT 1644529 37 100.0 36 ..................................... CTACTATGATGTAAGTACATATTAAAAGCCCCGTTA 1644602 37 100.0 37 ..................................... ATATTGGTGTTAATGTCTCCATACTATTCACGTTTTT 1644676 37 100.0 36 ..................................... TCTGTAAAGCAACGGTAGACAAAGGTAGTGAAACCT 1644749 37 100.0 36 ..................................... TTCTTTTGCCTCTAACAAGCTTTCGGCTACTTGGGA 1644822 37 97.3 37 .................T................... GAAGATCGATATGCAAAAACAGTTTATTATTATGAAA 1644896 37 97.3 35 .................T................... GAAATAATGTGTGAATCGGATCCTTCTTCTAAAGA 1644968 37 97.3 36 .................T................... GATATTCCGTAGTTTCAACAAAGCTTTCCGGCTTTT 1645041 37 89.2 36 ........G........TG..A............... AAGAGGTGGGGCGATGCAAGAATGTACTATGATAAA 1645114 37 100.0 36 ..................................... GAACAACAAATTGAAGGAGATAGTAATAAGGATAAT 1645187 37 100.0 37 ..................................... TTCTTTTGAAGATGAATGTTTAGCTTTTGCTAAGTGT 1645261 37 100.0 36 ..................................... ATCGAATCAAGGTTGACGCGGTGGTCATAAATGACT 1645334 37 89.2 36 ........G........TG..A............... TTCGCTGTTCCGGTAATTGTTTTATTTGAATATTAC 1645407 37 89.2 37 ........G........TG..A............... ACGGTAGATTTGTTGGCATCGGCATTCCCCATTAAAT 1645481 37 89.2 35 ........G........TG..A............... TCTGAATGTTCTTAAAATAGATCATTTCCATTTCT 1645553 37 86.5 38 ........G........TG..A..............T CAACAACAAAGATGGCGTTGATCTTTTGAGCGTTTCCC 1645628 37 89.2 37 ........G.........G..A..............T AATGAAAACATTACTACGCACTTTGTAGGAAAAGAAG 1645702 37 89.2 36 ........G.........G..A..............T CGCCCCAGCCTTGCTGATTCTCTTTGCTAAACTGTG 1645775 37 91.9 36 ........G.........G..A............... GAATCCGGATGCCATTTTTCTAAGGCTGCCTTAGTT 1645848 37 91.9 36 .................TG..A............... GAAGCAACTGCTTCTGAAGATACACAAGATGAAGGA 1645921 37 89.2 36 ........G........TG..A............... TTTTGCCACTGGTTCCCGGCATCTTCAACAAAAAGA 1645994 37 89.2 36 ........G........TG..A............... TAGGTAGGGAAGAGCTTAAGAGAATTAAGAAGTCTA 1646067 37 89.2 37 G................TG..A............... CGGAAGAGATAGAGAGAACAGCGAAAGCCGGAAGAGA 1646141 37 89.2 35 G................TG..A............... TCACTCAAAGAACTCTATTTAAAAAAGCCCTACAG 1646213 37 97.3 36 G.................................... GGAGATTATTCCGAAAGAAAATATCAGATACTTTCA 1646286 37 97.3 36 ........A............................ TTGGCGTTACCCTTTTCGGGGATTCCTACAGATTAG 1646359 37 97.3 36 ........A............................ CGATCTACCAACGTGCCTTTTAGATTGATAAAATTA 1646432 37 97.3 37 ........A............................ AGGTTAAACTGTATATTCAAGCCATCAGCGTTGAAGT 1646506 37 97.3 36 ........A............................ CGATCTACCAACGTGCCTTTTAGATTGATAAAATTA 1646579 37 97.3 35 ........A............................ ACAGAGATAGATAAAAAAACGGGCCTGGTTGATAT 1646651 37 97.3 36 ........A............................ TAAAGCAATGATGTATGATGGATATGGATATCCATT 1646724 37 97.3 36 ........A............................ TGATATCGTAATTATTTTTGTATTCAGTTAGTTTTG 1646797 37 89.2 37 ........G........TG..A............... ATGGAAATCCTAAAACCTACATCAAAGAGGAACTTAA 1646871 37 91.9 37 ........G.........G..A............... TTGAAATTATTTCTTCAGTAAAATCAAAATTCGATAA 1646945 37 91.9 36 .................TG..A............... TGCGTAACGATTTCGGGAGGTGCTCCGCCCGGTTTC 1647018 37 89.2 36 ........G........TG..A............... CTTTTGTCATTCTCACAATCATTATAATTATTAAAT 1647091 37 97.3 35 G.................................... AGGAGTTACTAATGTAAATTCCGCCATTTCTTCCA 1647163 37 91.9 35 .................TG..A............... TTGATGCCTAGCTTAACAGCGATTTGATTAGGGGC 1647235 37 89.2 36 G................TG..A............... GGGTGCAACCAGGTTTGGTTATTGGGTTAAGTGATT 1647308 37 89.2 36 G................TG..A............... AGGGCTGGGCTTATAATCCCGATGCCCCGGGAGGCG 1647381 37 89.2 36 G................TG..A............... ACAGAAGTATCGAATGTGAAAATTCAAAACGTGATT 1647454 37 86.5 36 G................TG..A...A........... AAGTTCCCCCTTTGGGGGTTAGGGGGAATAATTACT 1647527 37 91.9 36 .................TG..A............... TAACAAAAACGGTCGTGTATTCTCAGACTTGGTCGA 1647600 37 91.9 35 .................TG..A............... ATTTCAAAATTGGGTATCTACTGCGGTTATTTTCT 1647672 37 97.3 36 ................C.................... ATGATAAAGCCTTTGAAAATTACCAGGCTTTTGGCA 1647745 37 89.2 37 .................TG..A...A........... AAGTTCCCCCTTTGGGGGTTGGGTGGGAATAATTACT 1647819 37 91.9 0 ...........C.......................GT | ========== ====== ====== ====== ===================================== ======================================= ================== 77 37 96.1 36 CTTCCAGACCATTCCATCAAACAACTAGGATTGAAAC # Left flank : TGCTCCCTTGGATTATAAATTTGCATATTGGAAAGATAGGGTTTACGACACCTACAAACAGCAACTCTACTGTTATGCGGTATTAATAGAAGAGAACTTTCAAGTTGAAGTAAAAAAAGGCTTTTTGGTTTATACCCGAAGCAAACATAAATTGATAGAAGTCCCCATCCCGCTCGCTGCAAAAGCAGAAATAAAAGAAAGTATGGAAAAAATGCTTGTAATTATCGAGCAAAATAAATTTCCGAAAGCAACAACATTTAAGAAAAGATGTGTAAATTGTACCTACCGGAATATCTGCATTAAATAAGTATTCCGCCTGTCAATTTATTTCTAATCGCTTAAAATTTTACGCTTATGTCAGTGAACACGGGGCTTTTTGAATACGGAAAATTTACTTATTTTTCCGTTTTTACGTTCTTTGACATATTGAAAAATAAGGTTTTAGAAATTGAGAATATCGTTTTAAGCATTGTCGTTTCTGGATTAAGGCAAAGAATCGG # Right flank : TAAAATAATAAAAACTTTTTATTTAGTTCATTCTGAGCTTCCTAAGCTTTTCATTGAAAACTATTGGAATTTTCCTTTCGAAGGAAGGTTTAACCAAAACAAAAGTAATGACTAATAACCTCATTTAATATTCATTTTCGGAACAGTAGTTATACCTTTAGTCATCAAGCAATATTACTGTTAGGATTACTCCAGTGGTTCTAGTATAAGTGAATAGTTATATGCTGTGTCGGGTTTAATTCGGTATTTTTCTAATGTTTTAGGTCCACAACTGGCATTACCTACTCCTTCCTGAATACGATCGAGGTTTAAAAAGGTTTGTGTTTTAAAAATTTGCGGAAGCTCTGAGTTGTGTTTGGTTTTCCAGAGCTCTGCATCTTCGTAATTAAGCGCACTAAACGATAACGGATCATCTGTCGTAATTTTAAACCCGTTACCTTGAGCATTTTTAAGACTCAGCCAGCGTATATCTTCCCGATTGCCCATGCTCTGTGGTTTTA # Questionable array : NO Score: 8.77 # Score Detail : 1:0, 2:3, 3:3, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.71, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCAGACCATTCCATCAAACAACTAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.80,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-32] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : NA // Array 2 4771008-4768893 **** Predicted by CRISPRDetect 2.4 *** >NC_014041.1 Zunongwangia profunda SM-A87, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 4771007 47 100.0 30 ............................................... CACGATCATCGATAAGTATATTCAGCTTTG 4770930 47 100.0 30 ............................................... GATGCTACTAAGATGGGCGTTGGACTGCCT 4770853 47 100.0 30 ............................................... CATTGAAATATTCTTTTTGCTTTTTTACCG 4770776 47 100.0 30 ............................................... TTTACTTATTGGTTTTGCAGCTCAGGTTGC 4770699 47 100.0 30 ............................................... ATCAAACCCGCGTAAGGATAAAGGGATTGA 4770622 47 100.0 30 ............................................... CTACAATTTTTAGACTTCTATCAAAATCTG 4770545 47 100.0 29 ............................................... TAGTCCATCCCGGGCCCTTCGATAGTTTA 4770469 47 100.0 30 ............................................... GATCATCTGAATTTTGGCTCAGGTCGGGTA 4770392 47 100.0 30 ............................................... GGCTATTGCTGTCACTAAGATGAATTAGTA 4770315 47 100.0 30 ............................................... GAGATAGAGATATTAGCAAAAGGAGTATAA 4770238 47 100.0 30 ............................................... CCGAAACGCTCAAACATCGGGTCTCTAGGT 4770161 47 100.0 30 ............................................... ATATCACTCTCCATTTCTCAACGCTTTCTA 4770084 47 100.0 30 ............................................... AAAGGTGAATATGAATATGAATATGATAAT 4770007 47 100.0 24 ............................................... AAAGGTGAATATGAATATGATAAT 4769936 47 100.0 30 ............................................... ACCAAAGCTTTCTGTACAACAGCATCCCTT 4769859 47 100.0 30 ............................................... TCCTCATCATCATTGGATTGGTCTGGCTTG 4769782 47 100.0 29 ............................................... ATGCTCGTAAGTGTTTGGATGAAAACCTA 4769706 47 100.0 30 ............................................... TCCCGGATGCTATGGAACGGTTCATAGTAA 4769629 47 100.0 29 ............................................... AAGAGAATTAAACAAAGACCTTTCTCAAA 4769553 47 100.0 29 ............................................... CTTCGGGAGGTAAGTTTTATAAAGGGCTT 4769477 47 100.0 29 ............................................... GAACATATGCAAAGCAATGGGAGTGCCTA 4769401 47 100.0 30 ............................................... TCACGGTAAGCTGAACTTCGTAAATCCCGT 4769324 47 100.0 30 ............................................... ATTGCTGGTAACATGTATATCACTAAAGAA 4769247 47 100.0 30 ............................................... TTGATGCAGCCGTTTTACTTGCTCCTTCCG 4769170 47 100.0 30 ............................................... CCAGTTTTTTGTATTAATATCTTTTACCCT 4769093 47 100.0 30 ............................................... ATGTTATTAGATTCCGTAATGGGCGGTATA 4769016 47 100.0 30 ............................................... CGATGTTGTGTGAATTGGCGGAAATTAGTG 4768939 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 28 47 100.0 30 GTTGTGAATTGCTTTCAGAATTGTACTTTTAGTACTGGATTCACAGG # Left flank : GAATACCCCAAAACGATTTTTTGATGTAGAAACCGGGGATGAAATCGATTTGTATTCAGAAAATATTCAGGAAAATTATAAAAATGCGATCGAAAATTACTTTAAAAATCTAAAGTTGGAATGTGCAAAGTACCGTATTAGTTATGTTCCCGTAGATATCAACAAAAATTTTAATCAAATTTTGCAATCCTATTTTGTTGAAAGACAAAAGCTTGCTTAACAAGGTCAAAAAAAGATTAAAAAAAGGAGAAAAAAAGTTTGTGTGATTGAAAAACTGCAGTATATTTGCCCTCGCAATAACGCAACGGTCTGGTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGAGTTCGAGTCTCGTCCAGACCGCAAGATTGCAAAAAGCCTTTCAGAAATGAAAGGCTTTTTTATTGTAACTTATACACCCAACTTTTGAGATTGATCCGTGGTATGTTGTTGTGAATTTCCATGCTCTAGCCCTAAGAGACA # Right flank : ATACCAGGTTTAAAAACCTGGTATCCTGTGTTTTAAATGCTTTTTTAGAATTAAAAAAAGCAGGTCTTTTATCTTTTTAAATAAGGTTAAATTCTAGCAATATGAATCCTAGCATTTAAAAAAGTTCTAATTGCTGGTCCGGAATCTCTGGAAGAGTTTCTTTCTGACCATGAAAAAGTTCTATCATTCCAAACTGTTTATCGGTAATCTGCATTACTGCGACTTTTCCTTTTTTTGGAAGATTGTTTTTTGTTCTTTTTATATGTACCGCGGCATTTTCCCGACTGGCGCAGAACCTGGAATAAATAGAAAATTGAAACATCCCAAAGCCATCATCCAATAATTGTTTCCTAAAACGTGTAGCTGCTTTACGTTCACTACGAGTTTCAGTTGGTAGATCAAAAAAAACAAGAACCCACATACATCGATATTGGTTTAATCTGGAAAAACGGCTTTCAAGCATCGTTTTTAGTTTATTTATTATTTATTTAAATCCGCTT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAGAATTGTACTTTTAGTACTGGATTCACAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.83%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.30,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA //