Array 1 25428-22284 **** Predicted by CRISPRDetect 2.4 *** >NZ_POUT01000007.1 Pseudomonas stutzeri strain 24a75 NODE_7_length_274797_cov_22.771, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 25427 29 100.0 32 ............................. TTGGAGGGAGAGGCCGTGATCCGGACGCACCC 25366 29 100.0 32 ............................. GTCAGCCACTTCGTCGGAGTCGCATACGTACT 25305 29 100.0 32 ............................. ACCACCCGCACATCGCCGGCCTGAACCGCACC 25244 29 100.0 32 ............................. ATCGTTCGGCGCAGTAAATGCCTGATCACTTG 25183 29 100.0 32 ............................. TGCAGCTCTGCGCCGTTCCACAGCACGATGGG 25122 29 100.0 32 ............................. ACTGAACGCACCTTCGACTGGGACCTCTACGG 25061 29 100.0 32 ............................. GCGATCGCCACCAACGTGGGCAGCTACCGGCC 25000 29 100.0 32 ............................. GCGCGTCGACAGCATCAGCAGCCGGCGAAGCC 24939 29 100.0 32 ............................. TGCTGCGCCGTTCGTCTTTCGCTTGATCACGG 24878 29 100.0 33 ............................. CACGCCGGCGCGCTCGTCTTCGCCAAGCGCATG 24816 29 100.0 32 ............................. CAGCTTGCGGACCGTTGGCGCCTCCTCGCCGG 24755 29 100.0 32 ............................. TCAGCGGATGAGCTGCTGGCCACGCCGCGTCG 24694 29 100.0 32 ............................. GCTACGCCCTGCCGGAGCTGGATATCCGCTGG 24633 29 100.0 32 ............................. GCTGAGGAGTTCAGGCAGGCTCAGTTGGAGTA 24572 29 100.0 32 ............................. ACTACTCCGTTTAAGGTGATGGCGGCGTTGTC 24511 29 100.0 32 ............................. CCGATGCCCAGGTAGATGGCCCAGGAGCAGTG 24450 29 100.0 32 ............................. CCGCATCAATGAGCTGGGCTGTCTTCCTAGCA 24389 29 100.0 32 ............................. CGCCCCAGGCGCTTGAGGATCGGCACATGCTC 24328 29 100.0 32 ............................. CTGCCGGACACCAACTCGAACGCAGGCACGTT 24267 29 100.0 32 ............................. CAGGGCGAACTGCAATCCCGTCTGCAGGAGGC 24206 29 100.0 32 ............................. CCGGCCCATGGCAGTTCGCGCTGCAGGTGCTG 24145 29 100.0 32 ............................. GCGAACTCGTCCAGCAGCACGTTGGCCGAGAA 24084 29 100.0 32 ............................. CTCCGCGGCAAGAACTGCGAATACGAGGCGTA 24023 29 100.0 32 ............................. TCTCTTGCGTGTGTCTCGAAAATCCGCGATTA 23962 29 100.0 32 ............................. AATGACGTTCATCACTGCGCCCCCATGCACTT 23901 29 100.0 32 ............................. GTTCTGCAATCGGATGCCAACAGCTGGCAGTC 23840 29 100.0 32 ............................. CCGCCTCAGCTTGCGTATGACCGTTGGTCGCG 23779 29 100.0 32 ............................. GCAGGGCCGGTGCCCTTGCTTCGCCAGTTGGC 23718 29 100.0 32 ............................. CCTTACACCTGGCTGACGAAGCCGCAGGCAGC 23657 29 96.6 32 ............................A ATTTCAGTAGCGCCTCAAGATTCAGCGGCACC 23596 29 100.0 32 ............................. CCGGAATCGCCACGACCCGCCGCGCCTGGACC 23535 29 100.0 32 ............................. TCGATGTTCTTACCGGAAAACCCCCGAGCGGT 23474 29 100.0 33 ............................. CTGTCTTCGATCGGCGCCGGTCTGGGCGAAAAC 23412 29 96.6 32 ............................C GTATAAAGAAGAACAGCATCGCCCAGATCAGC 23351 29 100.0 32 ............................. CCAGCCCTAGGCAGTAGCTCTCGGTAGTAGTC 23290 29 100.0 32 ............................. GTCGAGCTGAAAACCAGCTTCAAGGACGCCGA 23229 29 100.0 33 ............................. TATTTGCGCCTGTAACTATTGGCGTGAATGACC 23167 29 100.0 32 ............................. CACGCCGCTCTTGGCGTAGTTGAGCTGAGTGC 23106 29 100.0 32 ............................. GCTCTGCTTTATCCCGAAGGGTGGTACCACTC 23045 29 100.0 32 ............................. CTTACTCGATCCTTTGCCGATGTATTCGGCTT 22984 29 100.0 32 ............................. TTGATTCGAACCATGCCCTCCGGAGCCTTCTT 22923 29 100.0 32 ............................. GCTGGATGCTCCTCTCCCGTTACCGTTCCGCT 22862 29 100.0 32 ............................. CTGAAAGGCGAGTTCGAAAAGCTCGGGGATAC 22801 29 100.0 32 ............................. CGCTTGCGAACTGGAGCGGCGCGGCCAGTACG 22740 29 100.0 32 ............................. GGTGCCAGCGGTCTGCTCTCCGAGGAGATGAG 22679 29 100.0 32 ............................. CGAGGAGCAGGCACAGGCGCAGCGCCGCGCGA 22618 29 100.0 32 ............................. AAGTCGCCGAACATGAACTGGACGTCGCCAGC 22557 29 100.0 32 ............................. CGAGGTGATCGACTGGCCCTGGCTGGTCAGGG 22496 29 100.0 32 ............................. GTATTCAATCGGGTATCGGTACTGCGTGATGC 22435 29 100.0 32 ............................. CCCTGGGCTTGTCCGGCAGCCGGATCGCCGAT 22374 29 100.0 32 ............................. TCGATTCACCAGTATTATCAAAGCGCGACAAA 22313 29 89.7 0 ...........C............CG... | G [22286] ========== ====== ====== ====== ============================= ================================= ================== 52 29 99.7 32 GTGTTCCCCGCACCCGCGGGGATGAACCG # Left flank : TCGGTAACGCTCAGTGAACGGGCGGGGAAGGCCAAACCCAGCCCTTCGTCGGTTTGCCGCCCCTCGGACCACTTATCCTGAAAACCGGGGATAGCCTTGCCGAAATCATGTAACCCCACCAGACAGGCCACCCAGCGCGCGACCTGCGCTCGCTCCAGCCCCAACGCCCGAGACGCCCACTCCAGCGTGCTCGCGGGCTCATGCGCGAGCATCCGCTCGGCCACCGCCGCCACATCCAGCAAGTGGGCCAGCACGCCATGACCAAAGCCCTCACCACTCTTGGCCCAGAGCCTACGAGCCGGGTCGCCCAGATCAGAGAATCCTTTCATCATGCCTCATCCGTCTTGCGATACGCGACTATGGCATACCTGACAAGATCAAATTGCCACTACTATTTGCGGCGGAGTCAAGCTCGATCTTTAACAAAAAAACTAGAAGGAAACCTCGGTAGATTTTTGGCATTCGATTTTTCCTCATAGGATCAATCGTTTACGCTAAGA # Right flank : GACCAGACAAGGGCGCGATCCATACAGGCTGTCGGCCCCCAGTCAAACCAGATGCGGCGCGCTACGCTCCAGCAAGGCATCGATATCCAGCCCCCGCGGCAGTGTGCCGTAGACCCGGCCGCGGCCTTCGAGGCGGCTGGCGAGGAAGGCGTCCGCTACGGCGGCGTTGCCCGCTTCGAGCAGCAGCCTGGCCTGCAGGGCGACCGCCACGTCTTCGGTGAGCTGGCGGGCGCGGTACTGGATGTCGTCGGTATCGCCGAAGGCGCTCTGCAGCCGCTGGATATGCGCCCGCAGCCGGGCATCGCCATGGCCGTCGCCGAGTTCGGCGAACAGCGCTTCGAGCACGCCGGGCTCTTTCGACAGGGCGCGCAGCACGTCCAGGCACTGCACGTTGCCGGAGCCTTCCCAAATGGAGTTGACCGGCGCTTCGCGGTACAGCCGCGGCAGGATGGTTTCCTCGACGTAGCCGGCGCCACCCAGGCACTCACTGGCCTCGGCGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACCCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCACCCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 35735-38936 **** Predicted by CRISPRDetect 2.4 *** >NZ_POUT01000007.1 Pseudomonas stutzeri strain 24a75 NODE_7_length_274797_cov_22.771, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 35735 29 100.0 32 ............................. CGGCTGGCCGTGCCCGTAGCGCCGGGCTCACC 35796 29 100.0 32 ............................. CATTTCAGCAAGGCCAAGGGCGGCGCACCGGT 35857 29 100.0 32 ............................. TATTACGGGCACGGCGACGGTCAGCCCCGGCA 35918 29 100.0 32 ............................. CTTCGACGACTTCGTCCAGGACGCGATCAGGC 35979 29 100.0 32 ............................. CGCACCGCCAGCAACACCATGGGCGCCCGCTG 36040 29 100.0 32 ............................. GTGCCGTTCAGGCGCACCTGCGCCTGCAGGCG 36101 29 100.0 32 ............................. AACGTCACCGTGGACGCCGCGCTGCAACTGTC 36162 29 100.0 32 ............................. GTTTTACCGGGGTCCACGACAGCACCGCCGAT 36223 29 100.0 32 ............................. CCAGGGAATCGGGCGGTTGAGAAACTGGCTGG 36284 29 100.0 32 ............................. CGGCTGCTGTTCTTCCTGGTGTCGGGCGTGAT 36345 29 100.0 32 ............................. GCGACAGGGTAGGCAGGCGAAGGTTGGGCACG 36406 29 100.0 32 ............................. CCACTCGTCTACTTCTCGTAGGTCCTTCGCGT 36467 29 100.0 32 ............................. CCTCCTGATTGAGACCTTCGTACCAGTTCGGC 36528 29 100.0 32 ............................. GTCGTGATGGGTGGCTCGATCTATCGCATGGG 36589 29 100.0 32 ............................. CGCGCCTCGGGGCTGGACTTGGCCTTCTCCAG 36650 29 100.0 32 ............................. TCCATGATCCAGCTCGAAACGGTGCGCGTCAC 36711 29 100.0 32 ............................. CGTTCGGGTCGTCGCTATGGATCATGAGGTAG 36772 29 100.0 32 ............................. CACTTGGAGGAGAAGGGCACCTGCCAGTACCT 36833 29 100.0 32 ............................. CAGATCGCCCAGGCTTTGGGTGCACCACTGAA 36894 29 100.0 32 ............................. GCGGGCCGCGATGGACTTGCCGATGCATTGGG 36955 29 100.0 32 ............................. CGGCTTCAGGGCGCGGTCAATAGCGCCGATGG 37016 29 100.0 32 ............................. GAATCTGACGGGTCCCTACGCTCGTTATAGGA 37077 29 100.0 32 ............................. GCTGAGGTGGCCGGCGAGGCGCCGAACCTGCA 37138 29 100.0 32 ............................. CACCCGCTAATGCTTGGGTACGAAACGAAACT 37199 29 100.0 32 ............................. TCCCAGTCGCCAATGTCCGAGCCCACCTGCAG 37260 29 96.6 32 ............................C GGGCGGTTCATTCACCTGGACATGGCGCCGGC 37321 29 100.0 32 ............................. TGGCCGGCGCGCTGCTCGAGGAGTACAGCCCG 37382 29 100.0 32 ............................. TCACCCTCCACGATGGCCTTGGCCCGCGCGAT 37443 29 100.0 32 ............................. TCACCCTCCACGATGGCCTTGGCCCGCGCGAT 37504 29 100.0 32 ............................. CCAGCGTGTACAAGGTCGATCCAAGGGTCAGC 37565 29 100.0 32 ............................. TGCTCTGCGGCGAATGCTGGATTGAACTTGGC 37626 29 100.0 32 ............................. GACAGCCAGGCATGAGCGAGCAGGAGACGAGG 37687 29 100.0 32 ............................. CGCGAACTGAACCGGGTATGGGGCTGCCCGGT 37748 29 100.0 32 ............................. CCCGACTACCTCATCACCCTGGCGGCGGACTA 37809 29 100.0 32 ............................. TGGCCTGGTAACCCTGGCCGCCACCCTCGGTT 37870 29 100.0 32 ............................. GTGGCTTGCACCTCGGAGGTGTCGATCACAGC 37931 29 100.0 32 ............................. TGGGGCGGCAGGCTGAGGTCGGGCAGCAGGTC 37992 29 100.0 32 ............................. CATTGGCGCCTGAACGGGTTCGGTCGGGTTTG 38053 29 100.0 32 ............................. TATCGTGCGGCGCTTGTTGTCGGCGTAGGCGA 38114 29 100.0 32 ............................. TTCGCCCTGCGCAGTCGCGCCGCGAAGCGGAT 38175 29 100.0 32 ............................. GCGAGCCGTTCGGCGCCGGCCCGGTTGACGCC 38236 29 100.0 33 ............................. GACCCCGGCCCAGTGCCGCCGGGCTATGCAACC 38298 29 100.0 32 ............................. TCGGCGATATCCGTCACCCGCCAGCCCATCCA 38359 29 100.0 32 ............................. TTCGACGACGTCCGGCGCGATGTTGCCCTGCA 38420 29 100.0 32 ............................. CCAGGCGAGGCGCTGCATATCGGTGTCGACTT 38481 29 100.0 32 ............................. ATTGCGCGGGATGGCTTCGCTGTGGTCAATCA 38542 29 100.0 32 ............................. TGGGCGCTGCTGACCAACAGCCAGGACCGCAC 38603 29 100.0 32 ............................. GTCGTCGCACCGAAGTAAGCCCCGAGCGGCGC 38664 29 100.0 32 ............................. ACGGTCAACCGAGCTCGGATTGCCCTGGACGA 38725 29 100.0 32 ............................. AAATCGACTTCGGCGACGCCGAGTCCGGCGAG 38786 29 100.0 32 ............................. CCGACGAACAGGCCCGCACTGAGGCCGAGGCT 38847 29 100.0 32 ............................. ATGCTGGACGACAAGATCACGCTCGAGGGGAT 38908 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 53 29 99.9 32 GTGTTCCCCGCACCCGCGGGGATGAACCG # Left flank : AAGATCATCCCCACCATCGAAGAGGTGCTGTCCGCCGGCGGCATCTCGCCGCCCGAAGCGCCACCCGAATCCGTACCGCCTGCCATCCCCAACCCTGAAAGCATCGGCGAAGCCGGGCACAGGACGCAGTGATGAGTTTTCTCGTCGTGGTCACCGAAAACGTGCCGCCGCGCCTGCGTGGCCGTATGGCCATCTGGCTGTTGGAAGTGCGCGCGGGCGTCTATATCGGCGATGTCTCCAAGCGCACCCGGGAAATGATCTGGGAGCAACTGAGCGAAGGACACGAGGACGGAAATGTAGTGATGGCTTGGGCGAGCAGTCATGAGTCCGGCTACGAATTCCAAACCCTCGGCCCCAATCGCCGCCTCCCCGTGGAGTTCGATGGCCTGCATCTGGTTGCCTTCCATCCGCTGGAAAATCCCGATCTTTAACAAGGAAAAAAAGCTGGTAGATTTTTAGCGGCCGATTTTTCCCTTGAAGATTAATTGGTTACGCTAAGT # Right flank : GCGTTTCTCGAACGGAGCAGCGGCCATCTCGACTGAGATGATGAACGCTGCACTGAACTGACGTTCGCCCCCGGCTACTCGCCAAGAATGCCCGCGAGCAGCCGGCGATCGATATTGGCGCCGCTGAGGACCACCGCGATGCGCTCGCCCTGGTTGCGCTCGCGTTCCTGCATGGCGCCGGCCAGGGCGGCGGCGCCGGCGCCTTCGGCGGTGTTGTGGGTGTCTTCGTGGAGCGCCCTGATCGCTGCGCGGATGGCCGCGTCCTCGACGCGCAGGATGCGTGCCGCGCCCGTTCGTATGATGTCCAGCGCCTCGGGGGCCGGCATTCGGCAGGCCAGGCCGTCGGCGAAGGTCTCGGCTGTCTCGGTGCAGACGATGCGGCCCTGCTCGAAGCTCTGCGCGTAGGCATCCGCGGCGCTGGACACCACGCCGACGATTTCTGTCTCCAGGCCCAGCAGATCGCGGGTGCGGATCATGCCGCAGATGCCCGAGCCCATGCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACCCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCACCCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //