Array 1 2325-2954 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACZBN010000019.1 Enterococcus faecalis strain ENV-128 NODE_19_length_3058_cov_162.663_ID_37, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 2325 37 97.3 28 ....................................C TGCTTGTCGTAAACGAGCAGCATTAGTA 2390 37 97.3 29 ....................................T TTCATGCTGCACCATTTAAAAGACTGGAT 2456 37 97.3 29 ....................................C CAAACAGCAACCGGGTGCCAACTTATCGA 2522 37 100.0 29 ..................................... AACTGGAGCTAGAAAGGGGTGAATTTTAA 2588 37 97.3 29 ....................................T TAAAATTCCACCAGCGGAACTAAGAGATA 2654 37 100.0 29 ..................................... CAGGTAGCTTGATACCATTTTTTGAATCG 2720 37 97.3 29 ....................................G GTCTCAGCTACATATGAATAAACTAGGTA 2786 37 97.3 29 ..............................T...... TTAAACAAAGTACAAATCCATATATATCA 2852 37 100.0 29 ..................................... ACCACAACTGTTGTTGTCACTACTGAAGA 2918 37 97.3 0 ....................................T | ========== ====== ====== ====== ===================================== ============================= ================== 10 37 98.1 29 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA # Left flank : CACAATTAAATGATAAACCAGAAGTCAAATCAATGATTGAGAAGTTAACTGGAACAATTAGTCAATTAATTGGCTATGAATTGTTGGAACATGAAATGGATTTGGAAGAAGATGGCATCACCGTGCAGGAACTTTTCAAAGCTCTTGGAATCAAAATCGAAACAACGAGTGATACGATTTTTGAAAAAGTTATGGAAATTACACAAGTACATCGTTATTTATCAAAGAAAAAATTATTGATTTTTATTAATGCGTGTACGTATTTAACAGAGGATGAAGTGCAACAAGTGGTAGAATATATCTCTTTAAATAATGTGGATGTCCTGTTTTTAGAACAAAGGGTGGTCCAGAACAGATTCCAATATATTTTGGACGAAAACTTTTATTTGAGTTATGAAAAAGCTTAAATTGTTATTGATTAGTGGTTCATTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAGTACGGAACTTTGGAGAAAAAATAATTCTCCGAG # Right flank : TGCGGTATTATTCGTAGGTTTGCTTTTTTGTTTTAGAATCATGTTGTTTGGTTTTCGCAGATACGATATGATTGATGTAAAAATATCGTTGATATGTATAAATG # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 1 53811-54771 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACZBN010000001.1 Enterococcus faecalis strain ENV-128 NODE_1_length_908582_cov_118.416_ID_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 53811 37 97.3 29 ....................................T CGTTCTTGTGAAATAAGCACTTGGACATT 53877 37 97.3 29 ....................................C AGCCTTTCGGACGTTGTTCGGACACCTTT 53943 37 100.0 29 ..................................... CTCGCAAACTGATACGTTCTCTTATTAGA 54009 37 97.3 29 ....................................G ATAACAGAAAACCGCCTAGCCCAACTGTC 54075 37 100.0 29 ..................................... GATCGCAACAGTAATGTATTCAGTAGCAA 54141 37 97.3 29 ....................................C TCCCATTTGCGATCAATTGCAACACAATC 54207 37 97.3 29 ....................................T AAGCAAACAGGTACACTGAAAACACTATC 54273 37 97.3 29 ....................................T CTATAATAACCTAGAGGGATTTCAATGAG 54339 37 100.0 29 ..................................... GCAGCTTCCTCTGCTATACGCTCTTCTAA 54405 37 97.3 29 ....................................G CAATAGATAATGTTGCCCAAATTGGATAA 54471 37 97.3 29 ....................................T AAACACGATGATGGTTATTGGACCTATTA 54537 37 97.3 29 ....................................C CGAACTTGTGGCTTAAGTCATACATACAG 54603 37 100.0 29 ..................................... TTTCTCTTCATATATAAATTCATTCTTGG 54669 37 94.6 29 ....................G...............G ATGGCCGTCACACCAATGCTGCACGATTA 54735 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================= ================== 15 37 98.0 29 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA # Left flank : CATATATCCTCATCAAGTAGTAAATGCTTCTTTTGACTTTCAAGAGGGACGAACAACAGAAGGTGGAGAAATGACACACATGATTGGCTTTGCCACTTTGCAAGAAAATACCTATGAAGATTTGGAGCAACTAAGCGTACCTGCTCATACATGGGCGGTTTTTCCAAATGAAGGTCCTTTCCCACAAACTTTACAAGAAACCTGGGCAAGGATATTCTCTGAATGGTTGCCTTCATCTGGTTACCAAGTCGTTGCAGCACCAGAAATTTCGTTTACGCAATATCAAGGACCAGCAGAAGCTAAGTATAGTGAAATCTGGCTCGCTGTTACAGCTACTAAATAAAGAAAAACCACCATTGAAAAATGGTGGGTTTTTCCGCCAAGAAGGAGAAAGTTTGGTATAATAAACGTGAAGAAAAAAATCAGACCTTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAATACGGAATCATGGAGAAAAAATAATTCTCCGAG # Right flank : AAACTTTTTTGATTTGGCTTTTTCTCCCTTGTTTTATAGTCATGTTGTTAAAAAACAAACTATCACCTCAAGCAATCCGTAATTTTCATCACAAGATTAGAATTTTTATCATCAAAGACGAGCTGCTTCAATTTTCAAAAACTAATCAAGTGATAAGTCAAAATGTTGATAGATTGAGATTAGTTCTTCCTTTTTTTAGGAAGGGCTTTTTTTATTGATAGAAGAAAGGGAAGAAATCTTGGTAGCACCTAAAAAAATTGTGAGAAATGCTTCTGTATTGTTTGGTTTCTGCCTCAGAAAGTTGTATACTTAGATTGGAATTATTCTATATTACATGCATTTTCACACTTTTTGGAAAAGTTCACTTGAATTTTCTTTTAGTTTCGTAGATAAAAGGAGTCATCGCTAATGGAAATGAACAATTCAGGTAAGCTTGTTTCTTTGTGTGGAGGCAAATCAGGGAGGAAATAATATGTTTGATATTGTAACATTGGCGAGAA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //