Array 1 33143-39578 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPOA01000003.1 Aeromonas caviae strain KAM364 sequence003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 33143 29 100.0 32 ............................. GTACAGATCCACGCCACCCAGGGGGAGCTTGA 33204 29 100.0 32 ............................. TTCTGGATCCGCTGTGAAAGCAGGTTCATCCC 33265 29 100.0 32 ............................. CGGTCTATTTCCCGGAAGACAAGCCGGGGCTG 33326 29 100.0 32 ............................. GGGGCGCTCCATGAGCCCGCCGCCGGCAGGCA 33387 29 100.0 32 ............................. GCCACCACTTATCACGGCGAAGAGTGGCCGAG 33448 29 100.0 32 ............................. GCATCGCTCACGCTGGTCTTGTTGGCTCGGTC 33509 29 100.0 32 ............................. GCCAAAGGGGGAGAGCGAAGAGGGGAGAAGTC 33570 29 100.0 32 ............................. CGCTGGCAGGAGCTGGAATCCCAACAGGGGCC 33631 29 100.0 32 ............................. CAATGGGAATCCCTGCGTGGTGCGATTGAGCA 33692 29 100.0 32 ............................. GGGGTATCATCCCGCCCCCTGGGGAAGGTGGC 33753 29 100.0 32 ............................. ATGGATAGCTGCTCGGCAAAGGGTACGTTTGC 33814 29 100.0 32 ............................. CGGGAGAAGGCTCGCAAGCCTGAGAAGCTGGA 33875 29 100.0 32 ............................. AAGGTGACCGGTACCGGGACAACCTTCGCAGA 33936 29 100.0 32 ............................. CCCGCACGAGGCGGGCCAGAAATGAAAAAGGC 33997 29 100.0 32 ............................. ATGGCCAGAGTCCCCGTGACCCTGGCCTTTTT 34058 29 100.0 32 ............................. AGCCGCACCGATCTGATGGTGATCGCCGATGA 34119 29 100.0 32 ............................. CCGATCTGCTACTGCTGGAGCTGCTGACTGAA 34180 29 100.0 32 ............................. GTCGCAGGTGTCGTGTCGGCATACATAATCGT 34241 29 100.0 32 ............................. TCAAGATGAACAGCAACCCTTTGACAACCACC 34302 29 100.0 33 ............................. CGGTTCCCGTCTTACCGCCTCGGTTGAGCCTGA 34364 29 100.0 32 ............................. GCATCCCCGGACCTTTGGGATCATGCTGGACA 34425 29 100.0 32 ............................. CCCGCTCGAGGCGGGCTTGTTTTCGATGAGTA 34486 29 100.0 32 ............................. CCATTGGCAGCAATGGCGGTGGCAATCGTGGT 34547 29 100.0 32 ............................. GCAGAGGACGCCACTGATGATGCCAGACTCTT 34608 29 100.0 32 ............................. GAACAAGGGGTCGGACTCCGCCACGTAGGCGC 34669 29 100.0 32 ............................. CCGTTCGCCTGGCCCGCGAGCTGATCACCCGC 34730 29 100.0 32 ............................. GCTGCTGGGGCGGCATGGCTTTGTTGCCTCAT 34791 29 100.0 32 ............................. CCGGTCTGTGAAACCCTATTTCGTTTTATGAT 34852 29 100.0 32 ............................. GCAGAACTGCTGCTCAGTCGTGTGCAGCGCTT 34913 29 100.0 32 ............................. CTCCGTGAAATCTACCCGACCCGGCGCATCTA 34974 29 100.0 32 ............................. GCGGTGGCAGCATGAGACTGACCCACGCTATC 35035 29 100.0 32 ............................. CCCGTAGGCATATCGGGTTGACGGAGATTAAG 35096 29 100.0 32 ............................. GAGCAGGCCGACAAGGCCGAGCGCGAGAACCG 35157 29 100.0 32 ............................. CGGCTGGAGTTTATCAAGGGCCGCCGCGTCTA 35218 29 100.0 32 ............................. GCTGAATCTATGGCTGGTATGGGGGATGTGGC 35279 29 100.0 32 ............................. TGAGGGAGATGCGGGCGGATTAGGGGTGGCAG 35340 29 100.0 32 ............................. GTGGAGCAGGACTTCAACGTGGCGGCCCAGCA 35401 29 100.0 32 ............................. GCCGGATCGTAGTTGTCGTGCGTTTCGCCGTC 35462 29 100.0 32 ............................. TATTTCGCCAGCATCGATCACGCCCGCCTCAA 35523 29 100.0 32 ............................. GCTGTGGTGATTAACGTGGAGCAGGAGGATGG 35584 29 100.0 32 ............................. GTGGCGCAGAAGACGCTTGCCGGCGTGTTGGC 35645 29 100.0 32 ............................. CGGGAACGGCGTGGCGCCAACGTGGCCACCCA 35706 29 100.0 32 ............................. CCCCGCTCGGTAGATGGGCAGTTGCTGGATGA 35767 29 100.0 32 ............................. ATACCGCGCTCCAGCTGATCAACAGCACCTCC 35828 29 100.0 32 ............................. GCTCATGAGGCCGGACGAGATCACCCGGCCAT 35889 29 100.0 32 ............................. TCTGGCTGTCTATGGCCCGAGAGGTATACGGC 35950 29 100.0 32 ............................. TAACCTAACGTCCGCAGGTTACCCGCCAGTTA 36011 29 100.0 32 ............................. CTATACGGTCAACTATATTGCGGGCAATTTCC 36072 29 100.0 32 ............................. CCGAAGAGGAACGCACCATTCTCATACGTTGG 36133 29 100.0 32 ............................. GGTAAGTACGGCGCCACCATCTATCTGGATAA 36194 29 100.0 32 ............................. TTGTTAAATTCGCCCCCGTCCAGCTTTTCGGA 36255 29 100.0 32 ............................. CCTATGTCCAGTTGTTCGACCTGTTAACAGTT 36316 29 100.0 32 ............................. CCTTCAAATGGGACGAGAAAAACGCCGCCGCC 36377 29 100.0 32 ............................. AGTACAACCGCGAGCAGATGCTCCTGGCTGGC 36438 29 100.0 32 ............................. GTGGGCGCCCGCATGGCCTTCATTGCGGCCTA 36499 29 100.0 32 ............................. GAAGTTTCCAGGAACCTGCGGGCGCAGTGTTA 36560 29 100.0 32 ............................. AGGCCGAGCGCCTTGAGCTTGACGGCCTGGAT 36621 29 100.0 32 ............................. CTGAATGGCAAGTTCCGCGCTGACTGGGAGGA 36682 29 100.0 32 ............................. TCTCATTACCGCCCTAGGGGGCTCAAAGGAAA 36743 29 100.0 32 ............................. TTGGCCGATGCGAATGGGGTGAGCCGTGGCAG 36804 29 100.0 32 ............................. GCAGAGTGGCCTGACGCTGATTACGATTCCAT 36865 29 100.0 32 ............................. TCTCGATCCACTCTGGGTCTTTCTCGGAGTGA 36926 29 100.0 32 ............................. CAGCATCACCCGAGCGCATGATAGCTTGCGCC 36987 29 100.0 32 ............................. ACAGCAGAGACACCGGCGTCCATCAAGGTCAG 37048 29 100.0 32 ............................. CTGGCCAGTGTGTACGGCCGGATTTGGGTCGT 37109 29 100.0 32 ............................. AAAGCCACTCGAACCAACACCAACGCCTGGCG 37170 29 100.0 32 ............................. TGGCTAATATGTGTTATCCGTTCCTGTTGTTG 37231 29 100.0 32 ............................. GAGAAGGCGATGCCTATCCCAGTCAGTCAAAT 37292 29 100.0 32 ............................. ACAACGTAATGCGACTGTGGCACGGCACCCGA 37353 29 100.0 32 ............................. GCATGATCAGGTGATCGGCCTCGTCGTTCTCT 37414 29 100.0 32 ............................. TATGGCGGCTCGTATGTGGCAGCAACTCCGGC 37475 29 100.0 32 ............................. GATCCGACCGTGGGCGACAATGCCGCCGAGAT 37536 29 100.0 32 ............................. CCTAACAGCTAACAGCCCAAGGGCTCTATCAT 37597 29 100.0 32 ............................. CAGATGATGCTCTATGCGCTTGGCCTGCTGCG 37658 29 100.0 32 ............................. CAGATGATGCTCTATGCGCTTGGCCTGCTGCG 37719 29 96.6 32 ............................C GACGATCTGAAATCGTCCATTGTCGGATGGCA 37780 29 100.0 32 ............................. GAGAGACGACCATGGCTCGTACTATTACCAGC 37841 29 100.0 32 ............................. GCCGTCCAGGCGAAAGAGACCATCACCCGTTC 37902 29 100.0 32 ............................. ACCGAGGCCGCGCCGCTCTGGATTGGTGATGA 37963 29 100.0 32 ............................. CTGACTACATGGCCAAGCGCGAAGAGGCGATG 38024 29 100.0 32 ............................. CTACTAGCCGTCCCAGTCTGCACAATCCCGCC 38085 29 100.0 32 ............................. CTGGTTATTGCCGGCGCCTGGGCGTCAGGATC 38146 29 100.0 32 ............................. CCAGATTTCTTGATACGCTTCACCATAGATAA 38207 29 100.0 32 ............................. CGCAGCGTCCGGGAGGCCCCGCCGTACTGGAT 38268 29 100.0 32 ............................. CAGGAGGCACTGGATCAGCAAGTCCAAGATGA 38329 29 100.0 32 ............................. ATCTCACCGCTACCTCATCTATAGGCACCGTT 38390 29 100.0 32 ............................. GATAGTTGAGCCGTTGGCGCTATCACGGAAAA 38451 29 100.0 32 ............................. GCGGCGGCGGCCTTGCTGTCTGCTGCCTGGTA 38512 29 100.0 32 ............................. CACCTGGTTGCGCTCGCTGGCACTCCGATAGT 38573 29 100.0 32 ............................. TTGAGGCCGTTCTGCTCGCTGTCGAAATCTGA 38634 29 100.0 32 ............................. TCGAGAGAATCAAACTCGTGTTTTTGATCAGC 38695 29 100.0 33 ............................. GCCACAAATATAGAGGTGCCGGACTGGACTTGC 38757 29 100.0 32 ............................. TCGATGTAAGGGCATTCAGCGCGGATTGTCAC 38818 29 100.0 32 ............................. TATCTCCCACCCGGCCCGGCAACTGACCGAGA 38879 29 100.0 32 ............................. AGCTGGGTTCGCCTTCCAGCGAAGAAGTGAAG 38940 29 100.0 32 ............................. CTGTCACAGTTGCACCGGGACGAGTTTCTGAC 39001 29 100.0 32 ............................. CTGCCGATGGCGGCCTTGGCCGGACCGTCCGG 39062 29 100.0 32 ............................. AAGGCCCAGGCGATCATCTGCTCACTGGCGAG 39123 29 100.0 32 ............................. ATGCTGGACTCGCTGATCCCGTCACCGGTGAG 39184 29 100.0 32 ............................. CAGATCGCCATCTATAACGTTGGCGCTGACGG 39245 29 100.0 32 ............................. GGCATCGCCCAAGCCGGTCATCTGCTGGTCGA 39306 29 96.6 32 ..............T.............. CGCGTCGAATGCTGGGGGTATAACGATGGAAA 39367 29 100.0 32 ............................. CCTGCTGTCGTGGCGGGTGAAGTCGCCGCCGC 39428 29 89.7 32 ........T....T.............T. TGGAACCAGACGTTCAGGTCCAGCATCAAGGT 39489 29 96.6 32 ............T................ GATGGAGTGGTGGCGAAGACGCGAATCCAGAA 39550 29 96.6 0 ............T................ | ========== ====== ====== ====== ============================= ================================= ================== 106 29 99.8 32 CTGTTCCCCGCGCCCGCGGGGATGAACCG # Left flank : CCGCTTATCGAGGAGGTGCTCTCGGCCGGGGGCATCACCCCGCCAGACGCCCCTGCAGATGCCCAGCCGCCCGCCATCCCCGAACCCGCCGGCATGGGGGATGCCGGTCACAGGAGTCAGTGATGAGCATGCTGGTGGTGATCACCGAGGATGTGCCGCCGCGCCTGCGCGGCCGGCTCGCGGTCTGGTTACTCGAGGTGCGTGCCGGTGTCTATGTGGGAGATGTGTCGCGCCGGGTGCGAGAGATGATCTGGCAGCAGTGCGAGGCTTTGGTGGAGCAGGGCAATATCGTGATGGCCTGGCCCGCTAATAACGATTCTGGTTTTGACTTTCAAACCCTGGGGACCAATCGCAGGGTGCCGGTGGACCTCGATGGTTGCCGATTGGTCTCTTTTCTACCCATTGAAAATCAATAGCTTAGCGTTCATTAACAATCTGGACTAGTCGGTGGGTTTTCTATGGTTGGAAAAAGCCATCAAAATCAATAGCATCTGTTAAGT # Right flank : GAATCTCTTCGGCATGGCATGCTCTCGATTACGTGCTAGTGTAATCGTTCTGGCTGTCATTGTTTGATCAGCAGCGAGAGCTGATAGCGGACATTTTCTAACAGAGCAGCTTTAATTTGGCGCGTCGGGTTTCGATTTTGGGTGTCATCTGATCGCGTGTGTAATCACCCGTAACGAGACAAGTGAATTTTTTGACGAGCATTGAGCGGCGGATTTACACGCCTGCGGCTTTCCCACTCAAATCACCATGATCATTACCAACCCTAGACAGGACGTGGCTTTGCTAGTCGCCAGCCTTCTAGGGATAGGTGATCAGGTAAGGCTTTTCTAATCAGATAAGGTGATCGGATCAGGCAACGCTGATCTGATCCGATGCACCTGATCACCTCTCAAATTTTCTCCAGATACCAGCCCCATGGTTCGTTTTGAGCACCTACTTGGCATGAGACGAACTGCCAGCCAAGGTGGTACAAGTCATTATTTAAACGCCGAAACACCAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCGCCCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCGCCCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //