Array 1 2250-3802 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQVK01000006.1 Veillonella sp. VA137 contig_0006, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2250 36 100.0 30 .................................... TCGCTAAGAGGTAGACAATCCTGTTACGTT 2316 36 100.0 30 .................................... TTCAGGATTTAAATAAATCGCTTACTCCCC 2382 36 100.0 30 .................................... AATTTACAAAGTGTAAATTCTACAAGAAAT 2448 36 100.0 30 .................................... TTCATACTCATCAAAGATATCAACTCCACC 2514 36 100.0 30 .................................... CAGCTTTTACTCATGGATATTTTTATAACC 2580 36 100.0 30 .................................... CAAGTCCACATATATACAGTGCTGCCACTA 2646 36 100.0 30 .................................... AAAATACAAAGATTAGATTTTTAAAGCATT 2712 36 100.0 30 .................................... CGAATGGCAACATAAATTAGAAGTCATTAA 2778 36 100.0 30 .................................... GACAGTTAATGTATATACTTGTAATGGGTC 2844 36 100.0 30 .................................... CTTATGAAAGTTTAACATCTGCTCCTACAT 2910 36 100.0 30 .................................... TAAAGCATACTTAAATATACCTAAAATAAA 2976 36 100.0 30 .................................... ACAAGCATAATATTTAAAAAAGAAATAATG 3042 36 100.0 30 .................................... GAAATAAATTGCGGTCTGCGACGCTTTTTT 3108 36 100.0 30 .................................... TAAAGGATAGTGAAGGCAACGTAGACGATT 3174 36 100.0 30 .................................... ATATGATTGTGCATACACTTGTTATGGAAA 3240 36 97.2 30 ....................A............... AGAAGGTAGTTTTACATACCCCTAATGATG 3306 36 100.0 30 .................................... AGTCGCCAGTATGCTAGGCTACAGCATGTA 3372 36 97.2 30 ....................T............... ACGTCATGAATACTACTATAGCTCCTTTGA 3438 36 94.4 30 ....................TA.............. TCTGCCACTATCACCCAATCTGCGTGACAG 3504 36 88.9 30 ....................T...T....T.....T ATACTGATCCATCCGCCCTACGGTACGTTG 3570 36 94.4 30 ....................T..........T.... TTCGGAGAGGCTTTTGGGGGGTTAATTATC 3636 36 94.4 29 ....................T.......G....... AGGTCAAAATTCGCTATTTTTTAGGTAAT 3701 36 91.7 30 .................C..T..G............ AACATAATGCAGTGGATCCGAACACTTTGG 3767 36 72.2 0 ......A......A......TAA.T..AT....T.T | ========== ====== ====== ====== ==================================== ============================== ================== 24 36 97.1 30 GTTTGAGAGTAGTGTGATTCCGTAAATGACTCAAAC # Left flank : AACCCCATCCAGGTAGATGTGAATAGTAAAACAATACTAACAAAGTTAACGGCCAATTTGGTGAAAGAAAGTAATTTAATGATGGAAGAGTTACATGAAACGGTGTCTAGATTACATCAATTTTACTATCAACTGGAATTTGGATCATCGATTGATATCGAGCATAAGGAAGAAATCGTTGCTGCGGATATCATCAAGTTAGGAGCTTTTAAAATACCTGAAAATGATGCGGATCCAGTGGACCGTTTAGTAGACTATATCAATATAGTTCATGAACTATTAAATCCAGATCTATTTGTGATTGCAAATATAGAGATGTATTTAGACGTGGAAGAATTACATGCATTTTTTACGACTATGTTAGCGAAACAGCTATGCGTTTTATGTATATCTTCTGGGGTACATGGACTAGATGATATTGATAAATCTTTTATTAATGGGTATACTTTAGATAGCGACTTTTGTTTGATATAACAGCGTTTACAGAATCACACTTGGTG # Right flank : TGAGATAATTACCAAGTATATTAAGATATTTGAACTTAATTGTTTTATAATTTTATCATTTAAACGAAGGAGGCCCTCCATGGCTAAATACGAATGGTGTACTGATGAATACCTAGAAAAGAAAAAAGAATGTTTTGATGCTTGTTTAAGTAAAGAATTTTTACAAGACTTGCAGGAATTGGTGCGTGAACATTATGATTTCGATGATGACTATCGCATTGGTAACTGGGACTTTATGGATGAAGATACTGTGGGTGTATACCGATTTGTCGAGACTTTAGCTGAAAAACATGGTGTTCAGGAACTGATTACCTTTTTAGACTCATTGGATTGGTGTGAGTATGATCTTGCAATGGATACCATGTTTGTTACCTATGGTAGAATGTTTCATTTGTTTACGCCAAAACGGCGCTATAGAAATCTATTTAAAGCAAAAGCTTTACATTATAAAGCTTGGATGCGAGAATTGAGGAAAAAATAAAATGATTTACTTTACCAGC # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAGTAGTGTGATTCCGTAAATGACTCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //