Array 1 18667-17047 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZYR01000036.1 Neisseria meningitidis strain Neisseria meningitidis isolate R207, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 18666 36 97.2 30 ........G........................... GGACGGCGGTTCTAAAATATGAAAACTCAA 18600 36 100.0 30 .................................... AAACTCAACGCATCTAACATAGTTCACACT 18534 36 100.0 30 .................................... GGTCAGATTATAATAACGTTGAGCGCGTGT 18468 36 100.0 30 .................................... CTGGAAGACTGGTAAGAAACGAGATGCACA 18402 36 100.0 30 .................................... ATAAATCAATACCGTGAAAACCTCATGTGT 18336 36 100.0 30 .................................... ATAAAAAATAAAAAAAACCAAAAATAATAG 18270 36 100.0 30 .................................... ATATCGTACTCTTTTACGTTATTAACAAAT 18204 36 100.0 30 .................................... CTGAAAGGTAAGGAACGGGCGGCTTGTGAG 18138 36 100.0 30 .................................... ACGGCTGCCGCAACGCCGCCCGAAACCATC 18072 36 100.0 30 .................................... GAGCATCTATTAGGGGTGAAGGTAGATCTT 18006 36 100.0 30 .................................... CTTTTGCCGCCATCGACGCAGCCGACAGGG 17940 36 100.0 30 .................................... ACTTAATTTATTCAGTTCTTCTTTATGCCA 17874 36 100.0 30 .................................... ATGGGGTATGCAATTACATCGCTTGGGTTT 17808 36 100.0 30 .................................... AAATTATACCAATGGCGAAAATCTCGGGCG 17742 36 100.0 30 .................................... ACACTTGTCGCCGTTATTCAGGCGGCGAGC 17676 36 100.0 30 .................................... CAAAATCTAAGGCTTGAACAAACCTGTGGA 17610 36 100.0 30 .................................... CGCCATGCTCATCGGCGCGGCAATCGGCAT 17544 36 100.0 30 .................................... AAGCAATAAAAAAAATAAATTAAACGGTTC 17478 36 100.0 30 .................................... ATCCTTTCAAATTTTGCTAAGTATAATCCA 17412 36 100.0 30 .................................... AAGACGTTTCCGCACCGCTCAAGCAGCTCG 17346 36 100.0 30 .................................... TTCGTAACCGCAATAGGGTCAACGATATGT 17280 36 100.0 30 .................................... GCTTGTATTGTATTGGCCGATGGCTTATAA 17214 36 100.0 30 .................................... TTCTGTTTTTCATTTGCTACGGATTTCCCG 17148 36 100.0 30 .................................... TCGCTATATGCGGCATAGCAGGCTACGTTC 17082 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 25 36 99.9 30 GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGGGCGGTTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACCCCAACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATGCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAACCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //