Array 1 1-514 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCDO01000155.1 Serratia marcescens strain KS45 contig155, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1 27 93.1 33 --........................... ACAGCTTACCGGTCACATCAGCGTTTTTGCGGC 61 29 100.0 32 ............................. AGCTTAAACCGGATGCCCGCACTTCACTGCAA 122 29 100.0 32 ............................. ATACTATAATCAGCTGGGTCAAGCCCTTTCCC 183 29 100.0 32 ............................. TTCATGACCCAAATGCGCGGGCTGGCGAATCT 244 29 96.6 32 ............................T GGAGACAGACGCAGAGCTACGCCAGCGTCAGG 305 29 100.0 32 ............................. CCGGCGCGACCGATCAGCTGGTTGGAGATTGG 366 29 100.0 33 ............................. CGCCACGCCCGGCTTGCCGTAGATGCGTATTGC 428 29 100.0 32 ............................. TGGGCATGGAGCAATAACCCGGCGTGGATTTG 489 26 89.7 0 ..........................--- | ========== ====== ====== ====== ============================= ================================= ================== 9 29 97.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : | # Right flank : | # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1-942 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCDO01000174.1 Serratia marcescens strain KS45 contig174, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1 27 93.1 32 --........................... TAAACCGCGCACGCGGCGCCGCAGATCAGATG 60 29 100.0 32 ............................. GGCATGTGGGAGTTTCCGCGTATTAACCAGGG 121 29 100.0 32 ............................. CGCTCGGTGATTGGGTTCATCTCGATGGTGCC 182 29 100.0 32 ............................. AGCGTCGCAAAGGCGACGGATGTTCTTCAGTG 243 29 100.0 32 ............................. CATGTTGCATAGATAGTGCTTGACTTTGTTTT 304 29 100.0 32 ............................. TTAACGACGATCTGGCCGGAGTGGTAAACCGA 365 29 100.0 32 ............................. TCGTCGGCGCTGACCGTGCGCTTTTCCTTTTT 426 29 100.0 32 ............................. CTGTAGAAGTGGTTTAATAGGCTGCGGCTATG 487 29 100.0 32 ............................. TGTTCTTCGTGCCGATGGCATACAACGGGCCG 548 29 100.0 32 ............................. AACTGGCCGCATTTGGGTTAACGCCCGAGGAC 609 29 100.0 32 ............................. AACAGGCTAACTTCACCGTGCTCAACACAGTA 670 29 100.0 32 ............................. GATTGGTTCGAGCCATCCCGAACCGTTGAAAA 731 29 100.0 32 ............................. TTAAAGTAACTTATAGTGATGAGGGTGACCAC 792 29 100.0 32 ............................. CCATCCAGGCAGAGACAGTGCTGTATGAGGCC 853 29 96.6 32 .............T............... TAACCCCAATGCCACTGCGGATCCGCCAAACA 914 29 86.2 0 ...............A........G..TC | ========== ====== ====== ====== ============================= ================================ ================== 16 29 98.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : | # Right flank : CCAGAGCTTCACTGCCGCACAGGCAGTTCGAATATGAGGGATAAAACTTTACCGACACCTGTTAACGGGGAAGCAAATACGCCAACGACAGCGGCGGGTGATTCACCAGCCGCTCTTTTTGTATTTTGCTCAGCTGTTTGACGCGGTATTCCAGCTTCAGCGCCGTTGAGCGATCCCCCACCTGGCAGTGAAACGCCAGCGTCAGCTCCCCTTTGCCGCGCAGCGCCTTGGCACCTTTGCCGGCTTGATGTTGCGCCAGGCGGCGCGCCACGTCGGTGGTGATGCCGGTATACAGCATGCCGCTCGGTAAACGCAGCATATAGAGATACCAGTGGGGTAAGTCCATCATTGGGGTCCTGTGCAAGGGTAGAGATGACATCAGGCCGCCATAGCTAAGCGCGGCATCTCTATTTTGTCACGATTTAACGATGGATTTCACCACTGGCGGAACGGTTTGTTTATTCCGTCTTGACGATAAGGGATTATTTTACACCCACGGT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //