Array 1 33987-31822 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHUTT010000042.1 Shewanella sp. NIFS-20-20 42, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 33986 29 100.0 32 ............................. TTTTGGAAAACCACAGTATTTATGACTTTGGC 33925 29 100.0 32 ............................. CATCGCCGCCAGTGCCGCCAGACCAGCCAGAA 33864 29 100.0 32 ............................. GTTGCTTGATACTGGCCTGACTGTTTACGCTA 33803 29 100.0 32 ............................. TATGCGCTCAAAAAGATGGGTGTAGCTTGTGA 33742 29 100.0 32 ............................. CCTTACTCCGGCAAAATGCGAACGAACAAGCC 33681 29 100.0 33 ............................. GTTGACGGTCGATAGTTTATACAGACCGTTAAC 33619 29 100.0 32 ............................. CCCAGCGTGAGCGTCAGGCCAAACTTGAGATC 33558 29 100.0 32 ............................. CGGGACCCGATCCAGAGTTAGTACGTCAAGCC 33497 29 100.0 32 ............................. CAGATCACCACCTCAGACCGTGGTGAGTCCAT 33436 29 100.0 32 ............................. CGTGTTTCTACTCTGCCCACTTGGCGCATCGT 33375 29 100.0 32 ............................. GTATTTTTGCCATCGCCGGATGATGAGATATC 33314 29 100.0 32 ............................. TTCAACTGTTGAACTTTGCAATTGTGATATTC 33253 29 100.0 32 ............................. AAGCTGTATTTTATCAATGACTCACCACCAAT 33192 29 100.0 32 ............................. TGGAGAATTGAATCAATCATATTTTGGTGTAA 33131 29 100.0 32 ............................. TTCGAATACCCTGACCTCATGCTTGCCAAATG 33070 29 100.0 32 ............................. TTGTCCAACGAGGCATTTGGCCGCGAGCAAGA 33009 29 100.0 32 ............................. GTGTTGGCCACAGTGCTCATGCCAGTAACCAG 32948 29 100.0 32 ............................. ATGTGCGCACCGGTGTTTACTGGGATGGTATT 32887 29 100.0 32 ............................. TTAATGTAAGTGAATCATTATCACTATAAAGA 32826 29 100.0 32 ............................. TTAATGTAAGTGAATCATTATCACTATAAAGA 32765 29 100.0 32 ............................. TCTCTTTGTCGATTGATATTGCATCGGCCGCA 32704 29 100.0 32 ............................. TACAGCAGCTGGAAACCAGCAACTATCTTGAG 32643 29 100.0 32 ............................. CAGCAATCCCAGCTCACTGCGTTTATTAAAAA 32582 29 100.0 32 ............................. TGCTTTCCAACGCTTAACACTGAGGGCAATGC 32521 29 100.0 32 ............................. CCAACCGCCAGAATTATCGCAGACCTTACCAT 32460 29 100.0 32 ............................. TCCACGGATTTACGCAGTGGGTAGAGCATGTC 32399 29 100.0 32 ............................. TGATTGCGGGCGGTGAATGTTGGCTCGATAAA 32338 29 100.0 32 ............................. CCAGTTATGCAGAGTTGCTTGCCACTATCGAG 32277 29 100.0 32 ............................. ATAGTCACGCATCGGTGTATCGAGTTCTGAGA 32216 29 100.0 32 ............................. GGGTTGCTACAGAAAGCTCAATCAGGCGATAT 32155 29 100.0 32 ............................. CTTGCATTTCAGTGAGCTTGGACTGAGTGCCG 32094 29 100.0 32 ............................. TAGATTTTTGGTCGGGGCTTAACCTTTCGCTA 32033 29 100.0 32 ............................. CAAGAAGTGATACAACTATCGCGATTAACGGA 31972 29 100.0 32 ............................. ATTGGTTTGCTAGCGTTCCGCCGCTATCCAGT 31911 29 100.0 32 ............................. GGGGGCGGCTTTACTTTTTTAAGAGGATTTGA 31850 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 36 29 100.0 32 GTGTTCCCCGTGCCCACGGGGATGAACCG # Left flank : GCTCAAGCAATGCGACTGTGGTGCGCCGAGCCAAAAAGTGAAGATGAAGAAAGCGGGTTGGAACGATGATTATAGGGCAAGAGTCTTCTTTGGGTTATAAATCCATCAAAGTATGCTCCCGCCCT # Right flank : ACGTTGATCCTGTTATGTGGTAAGTTCGCGCTTGCTTTGGGGATGTGAAACCGGGGAGGCCGCAGGGTGACTTAAGGCTAAAAGCAAAAAGGCTCACTATTAAGTGAGCCTTTCCACAAGAATTTGGTCGGTATGAGAGGATTCGAACCTCCGACCCCTGACACCCCATGACAGTGCGCTACCGGGCTGCGCTACATACCGAGAACCAAACCAGAGAGGCTAAGCCGTCATCTGATGGGGCGAACTTTAGCAAGAGCTCGACAGCAGTGCAAGGACAAAATACAACAAATTCAGCTAACTGGCTATTTTACAGGCGTATTTAATCCTGCGCGGGCCATGGGTTAATGTTTGTATAAACGTCGGCCTTCGCGCATCACTTGGATAAGCTCTGGGGCACTGAGTTTTTTATTCAGTTGTTGCTGATAATCCTTATCATAAATCGAGTATTGGCCGTGTCTATCGATAACAGTGATCTCGGCGGGCTGATAGATAGCAAATAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTGCCCACGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTGCCCACGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.70,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 44591-54380 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHUTT010000022.1 Shewanella sp. NIFS-20-20 22, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 44591 29 100.0 32 ............................. CTTGTCTTCGTGATACTGGCTTTACTGGTAAA 44652 29 100.0 32 ............................. CAACGGGGTCGTTTGACCACGATCAATTTTGG 44713 29 100.0 32 ............................. ATCGAAGCGGTCGAGTAACGTCGACACAATTT 44774 29 100.0 32 ............................. GATCACCTGTTAAAATATCTGCAAGTGGTGAG 44835 29 100.0 32 ............................. TCAAATTACCGCAGGTGACAATATGATGACGC 44896 29 100.0 32 ............................. TTGGTTTACCGCTATCGATTTTATACGTGACG 44957 29 100.0 32 ............................. GTTTCGGCGCGCTAACAGGCCGGTGCTATTCG 45018 29 100.0 32 ............................. AATGGGTGTGAAAATAATGACCGATATCGTAC 45079 29 100.0 32 ............................. TTAATGTTAATTGGCCTCGGTCGTCGCCTAAC 45140 29 100.0 32 ............................. TCACTGCGTGCTCACCTAGTCGAGCCCCGTCA 45201 29 100.0 32 ............................. TCGCGCCAATAATTCGATTATCGTAACGAATG 45262 29 100.0 32 ............................. GGTTCGTCAAATCCGTTGATTGACTCGGGCGC 45323 29 100.0 32 ............................. AACTTCGACCGTTCGACAGTTAATTATGACTA 45384 29 100.0 32 ............................. GTGTCGTGACGGATGGCGAGGACGGTGCGAAA 45445 29 100.0 32 ............................. CTCCTCTGTTGTCTGCAATAATAGTATCCATG 45506 29 100.0 32 ............................. CGTTACGAAATGTTTAGCTTGATGAAATCTAG 45567 29 100.0 32 ............................. TGACGTATTCCTCTGGTGATACGTTCAATCTA 45628 29 100.0 32 ............................. AATGCCTAGCGTGTGGTCACGTACCAAACGTC 45689 29 100.0 32 ............................. CGTATTCCTCTTTTAGAATGTAGTCGCCTAGC 45750 29 100.0 32 ............................. CGACTAAATTACCTTATTTACCTGACTTTCCA 45811 29 100.0 32 ............................. CTGATAGTAACGCGAACAGTATCGCACAACAC 45872 29 100.0 32 ............................. CTGGCGATTGGAAATACAAGGGTGATTCGCAC 45933 29 100.0 32 ............................. TTTGGATTGACTCAGCTAACACACATTTACCG 45994 29 100.0 32 ............................. TAGATATCCCTCAAGCGCCCACACTTTATCGC 46055 29 100.0 32 ............................. TTTACCGAAGGTTACGAGATTTTGACGCAACC 46116 29 100.0 32 ............................. TCTGGGTCTTATACGGTACCCGTGGGTCAAAA 46177 29 100.0 32 ............................. GGTTGCGCGACTACCAGTTAAAACTTTACAAC 46238 29 100.0 32 ............................. TTTAACGCCTGGTTATTTAACACGTTATTTAT 46299 29 100.0 32 ............................. TCAAATTACCGCAGGTGACAATATGACGCAGA 46360 29 100.0 32 ............................. ATGGCAGTCGCAGCCGTTGCCGCGCTTATTGA 46421 29 100.0 32 ............................. GGCCAACCCGTGGCGCGATTAGTCGAGGGGGC 46482 29 100.0 32 ............................. CTGCAAGAACTGCGGCGGGACGATGATCGGTG 46543 29 100.0 32 ............................. TGATACGGCTTTTTGTAGTTGCTGGTAGCCCG 46604 29 100.0 32 ............................. CATCAACTCCACGGTGGCCAAACTTAGCGTCC 46665 29 100.0 32 ............................. GGGCTGTAAAATGGCTAAATGTAATCTTTATG 46726 29 100.0 32 ............................. CACGTCGCGATCAAATCCTAGCAGCAGCGTTA 46787 29 100.0 32 ............................. CGAGTACGCCCCGTTCGGTGAATCGGCGGGCA 46848 29 100.0 32 ............................. GTTCTGAATGTCGAACTTTTCAGGCGTCACAA 46909 29 100.0 32 ............................. AATATGAACGTTACGCTAAATTAGCAGGTTAA 46970 29 100.0 32 ............................. CTATGTATCGCCGAAATTTCTGCACCTCAGAA 47031 29 100.0 32 ............................. TCCGACACTTACGTTATCCCTGTTGGTCAGAA 47092 29 100.0 32 ............................. ATCGCGGCATTAAACCTTGTGTAGCGTCTCAC 47153 29 100.0 32 ............................. TACATCAAATTGGTCTATATCTGGATCTGGTA 47214 29 100.0 32 ............................. TAAGATTTCGGATAGAGAAAGAGATTACAGAG 47275 29 100.0 32 ............................. CGTTTAAACGCGGCACTAGGTTAACACTTAAA 47336 29 100.0 32 ............................. CTTCTCCTCGAATACGCCGCCATCAAGGTCGG 47397 29 100.0 32 ............................. TCGGCGCGATACTCTGCGACCGCTTCATCCAT 47458 29 100.0 32 ............................. TTGATTACCATGTTTTTAGTGGTTCGTGTTTG 47519 29 100.0 32 ............................. CCGCATCGGATCGTAACGAGGTCAGATTTTTA 47580 29 100.0 32 ............................. CGTTGAGCTACATCACGTCCTCGTCACCGATC 47641 29 100.0 32 ............................. ATGCTGCGACACTTGTAACTGTTGCTGACGTT 47702 29 100.0 32 ............................. CTTAACCGATTGGTTCATGATGGTACCCTGTG 47763 29 100.0 32 ............................. CACATGTTGTACCTTGATGCGTCAGTGGTTCA 47824 29 100.0 32 ............................. TTTCCTGTAGCTAAAGCTCCTCTGTTGTCTGC 47885 29 100.0 32 ............................. TCATATATGGAACGCACTATCACTGGTGCGTG 47946 29 100.0 32 ............................. GTTCATTATGACACACCACCTAACGATTTTTC 48007 29 100.0 32 ............................. GATCACCTGTTAAAATATCTGCAAGTGGTGAA 48068 29 100.0 32 ............................. GTTAAAAATAATGACCGATATCGTACCAATCC 48129 29 100.0 32 ............................. ACGGCCGCGTTAATAACGTTATCGCTATCGAA 48190 29 100.0 32 ............................. TACGTGTCGGCTATTTGGCAGGCGTTGACGGG 48251 29 100.0 32 ............................. TCTGGATTGACTCAGCTAACACGCATTTACCG 48312 29 100.0 32 ............................. CCGTTCCGTGTATTCAGTGGATTGGTGCGAGG 48373 29 96.6 32 ............................T ATGTTTAGGTATGAATTAATATGGGATAAAAC 48434 29 100.0 32 ............................. TGAGTCATAAACGGTGTAACGTCACCTTCAAC 48495 29 100.0 32 ............................. CGTTACCCACGGCAAACGTTACGTCCGTCAAT 48556 29 100.0 32 ............................. TGGGAAACATCAAACGACGAGAGGGTTCGAGA 48617 29 100.0 32 ............................. GCGATGGAATACCCAATTGTGATGAACGACGA 48678 29 100.0 32 ............................. TGTGTCGGTTGTACGGATTCGTTTCACCTTTC 48739 29 100.0 32 ............................. GTTATTGGGCGCACTTGTGCGTTGCCAACCGA 48800 29 100.0 32 ............................. TTTTTACAACTAGTAAGGTCTAAAATACCCCA 48861 29 100.0 32 ............................. CGTAGGATAACTATGACAAATTCAAAACGGAA 48922 29 100.0 32 ............................. GTTTGATTGATAGGTTTGGCGAAGAAGAAGGT 48983 29 100.0 32 ............................. AATGAATGATTATTTTAAATAAGTGACTAATC 49044 29 100.0 32 ............................. ATAATCTGACGAAAAGCGACAAAATATAAAAA 49105 29 100.0 32 ............................. CGTGTTGGTGTCGTTTTTCTCAATCGTCACCA 49166 29 100.0 32 ............................. ATTGTTACGATTGATCGGCTATCTACCGTGAC 49227 29 100.0 32 ............................. TTCACGCATCACTTGGGACTTTTGAACGATAC 49288 29 100.0 32 ............................. TAAGATAAACTCGTGGTTTAACGATGACCGGT 49349 29 100.0 32 ............................. TACAGTGCCAACGGGGAATGGTAGATCCTCGA 49410 29 100.0 32 ............................. CGGACTGGCACGTGATAAATGGGATTACCACA 49471 29 100.0 32 ............................. GGTTATAAAATACAATGGGCACCGCTGTTACA 49532 29 100.0 32 ............................. ATGCTGGAACAGCACCCGCCGCACCGGTTAAC 49593 29 100.0 32 ............................. TACGAACTGAACCGTGCGCGCACAGCAACCGA 49654 29 100.0 32 ............................. CAACGTGGTACTATTGGCTCAAACCCTAACAA 49715 29 100.0 32 ............................. GTAGATATTTACAGTACGTCCCGGATTCTTAC 49776 29 100.0 32 ............................. AACGCCACGGTAGGGATGGACGGTTCAGTATG 49837 29 100.0 32 ............................. ACGACCGACGCTGCAATCGCTGAACGTGTCGA 49898 29 100.0 32 ............................. TCGAGTTATCGTGTCGGGACCGATACGCTCGC 49959 29 100.0 32 ............................. AACGAGTAAAACCACCAGAACGCATTGCGCGC 50020 29 100.0 32 ............................. TGGATTTGACGAACCTTTCTTTTTAATCGTGC 50081 29 100.0 32 ............................. CGATCAAGGATGTGGAGTCGGGCAAGTCTCAA 50142 29 100.0 32 ............................. CGACCGTTCGATTAATAAATTGTTTCGATGTT 50203 29 96.6 32 ............................A CTGGTTTACCGTCTTGGTTATTCACAACTGAC 50264 29 100.0 32 ............................. CCGACGAGACCGAGGAAGAGCTCGAAAAGGAA 50325 29 100.0 32 ............................. GTGGCCGACATTGGGCGGCTGGTGACCAGAGC 50386 29 100.0 32 ............................. TTCATCGGCTCCAGCGCCGACGACCTGCCAAA 50447 29 100.0 32 ............................. CAGAAATGGCGCGGTGAAGCCGGTGAAATCGC 50508 29 100.0 32 ............................. ACTGCCGTGTCTCAGTTGGACAATGAGCTTGA 50569 29 100.0 32 ............................. GAATTTAAAATGAGATACACATTAGACGAAAA 50630 29 100.0 32 ............................. GCGTTCAAGGTGCATTCAAGTCTCAGTTCGTC 50691 29 100.0 32 ............................. TTTGATCATATTATGGAGTTACCACAAATGGG 50752 29 100.0 32 ............................. CAGGGTTATGTCACGCATCGTTCCGCCAAAAT 50813 29 100.0 32 ............................. GTGTAATTAAACAGCCTGGTGGTGTCATCAAG 50874 29 100.0 32 ............................. AATGAAGCGCGTGAATAGTTACCAGTCCAGCG 50935 29 100.0 32 ............................. CGCGCTGGCTGAGTTGCAATCCATGCTACACC 50996 29 100.0 32 ............................. TTAGTTGAAAAAGGCTTGGAGAATGGCGAGCG 51057 29 100.0 32 ............................. CAATGGGATTAGCTTTGTTGTATCAGACGCCA 51118 29 100.0 32 ............................. TTTGTCATATTGCTCTGGTGTAACTAGGTCTG 51179 29 100.0 32 ............................. TTTTGAGCTATCGGCCAGCAAGGTAGCTTCAG 51240 29 100.0 32 ............................. TCACATCAGGATTCTTGCTGGCGCTGCACTCA 51301 29 100.0 32 ............................. CCCTTTAGTTACAGATGTCTCGCGGCTACTGA 51362 29 100.0 32 ............................. CGTAACCCCCTTGGGTACGTTAGGCAGCACAA 51423 29 100.0 32 ............................. AAACTGACAAACACCGCGACAAAGAGGTTGAC 51484 29 100.0 32 ............................. TCTAAAAATCCATGTAACAAAAGGAATAGAAA 51545 29 96.6 32 ..........C.................. ATCGCTTCAAAATTATCAGGCGTAACTGTCGA 51606 29 100.0 32 ............................. CGGTTTTTTTTATGCGGCATTCAGCGGTATTC 51667 29 100.0 32 ............................. TCGTCTAATTTATTGAAACGGTTTTTGAACCA 51728 29 100.0 32 ............................. CTAGTTGGATTAGATAAACAGATTGTTGAGAC 51789 29 100.0 32 ............................. CAGGACGTCACGCTGGATAAGAAACAAGAGAT 51850 29 100.0 32 ............................. TTATTAATTTTCATTGCTCTGGCGATCTTTTG 51911 29 100.0 32 ............................. AAAAAAACCAACCCACGGTATTACAATATCTA 51972 29 100.0 32 ............................. CGCTGCCAATAAGGCGGAGTCAATCTCGCCAA 52033 29 100.0 32 ............................. CGCTGCCAATAAGGCGGAGTCAATCTCGCCAA 52094 29 100.0 32 ............................. AGTGGAGTAATTCGAAATGATAAATCTAAACG 52155 29 100.0 32 ............................. ATTTTGTTCATCGTTGGCAGTGATGATGAGAT 52216 29 100.0 32 ............................. ATTATTTTCGCAAAGGTTCGGCAGGGGAAAAA 52277 29 100.0 32 ............................. CCGGTATCCCAGCCGACAGCCACCCCAGCTCC 52338 29 100.0 32 ............................. CTTGTAGCGCGAAACGTGTCTTTGTGTTCTCA 52399 29 100.0 32 ............................. AGCTTGCGTAATACCGATTGCGAATATCCAAT 52460 29 100.0 32 ............................. CACGTTGAGGCCCTGCTCAAAACGAATACCCG 52521 29 100.0 32 ............................. TATCAGTTTAAGCGGAGGTCGGCAAATGCCAA 52582 29 100.0 32 ............................. TTGACCGCAGCAAACTCAACCGATGCCAACGT 52643 29 100.0 32 ............................. AATACAAAACGGTTATGCAGAACAAGAAAAAA 52704 29 100.0 32 ............................. GGAAACCACGGCATCAGATGCATGCGCCTCAA 52765 29 100.0 32 ............................. GGAAACCACGGCATCAGATGCATGCGCCTCAA 52826 29 100.0 32 ............................. GTTAGGCAGGGGAAAAAAGGCGATATCGCTAT 52887 29 100.0 32 ............................. ATTGGCGCTTGTTCTCAAATCATGTTTACAGG 52948 29 100.0 32 ............................. TACTGGGTCATGAGATATGGTGACGCGCTGCT 53009 29 100.0 32 ............................. TCACAGGCGTATTTGACGCCATTTCGCAAAAG 53070 29 100.0 32 ............................. CACGTTGAGGCCCTGCTCAAAACGAATACCCG 53131 29 100.0 32 ............................. TATCAGTTTAAGCGGAGGTCGGCAAATGCCAA 53192 29 100.0 32 ............................. GCGAGGTGATGACGATATTGGGTGAGTGGTTG 53253 29 96.6 32 ............................A CTTGTCAAACGCCTGAGTGGATATCCCCAGGC 53314 29 100.0 32 ............................. CAGTTGTGGGTGCGGGGGGGTAAGGCTGCAAA 53375 29 100.0 32 ............................. TTCACGCAAACGCTTGGGTTAAACATTGTTGA 53436 29 100.0 33 ............................. CTGGGCTGGCAGGAGCTGGGCCGTCGCCGGGAA 53498 29 100.0 32 ............................. ATGTTGGCATGATTGAGTCAAACAGGCCCAAT 53559 29 100.0 32 ............................. CGCAACGTCATTTTATGGCAACCCACAGACGG 53620 29 100.0 32 ............................. GGTGAAGCGCACATGTATACCGACGGGGGGGA 53681 29 100.0 32 ............................. TCACAGGCGTATTTGACGCCATTTCGCAAAAG 53742 29 100.0 32 ............................. CGGGCACAGAGTCCAACATCAACGACATTGAC 53803 29 100.0 32 ............................. TCAGCAATACCCGGGATGGGTAATGCAGCATA 53864 29 100.0 32 ............................. CAATAGGGCATTGTCGGGGGTGGGTGTTGTTA 53925 29 100.0 32 ............................. GTTCATGTACTCCGCTGATCCCTCGGCCTCCA 53986 29 100.0 32 ............................. CCGCGATACATCTTGGACTCAAAGCCCTGTGT 54047 29 100.0 32 ............................. GCTCAACTTTGTTTGTGTGGCGCTGATTTTAT 54108 29 100.0 32 ............................. GACATCTCATCCGATGCCAACGTGTCGGACAG 54169 29 100.0 32 ............................. TTATTCTGCATTAGATTCACCTAGTAGTAGAT 54230 29 100.0 32 ............................. CGCAGGCTCTAGCGGAGATAATGAATCAGGGG 54291 29 96.6 32 ............................T CTGGCGTTCGCTCCCACATACGCATTCGGCAA 54352 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 161 29 99.9 32 GTGTTCCCCGTGCCCACGGGGATGAACCG # Left flank : CCTCTGATAGAAGAAATATTGGCCGCAGGTGAAATACAGCCGCCATTGCCGCCAGATTATATTCAGCCGCCAGCGATACCAGAGCCTGAATCCATAGGTGATTTTGGTCATAGGAGCAAATAGCGATGAGCATGTTGATGGTAGTCACTGAATCTGTCCCACCGAGACTAAGAGGTCGTTTAGCGGTTTGGTTATTAGAAGTGAGAGCTGGAGTATACGTCGGGGATGTTTCTCGACGTATACGCGAGATGATTTGGTTTCAAATTAGTGAGTTGGCAGCTGACGGTAATGTGGTGATGGCATGGGCAACGAATACTGAGTCAGGTTTTGAGTTTCAGACATATGGTCATAATCGTCGGGAGCCCATAGATGTAGACGGGCTAAGATTAGTTCGTTTTAAACCGACAAACTCACCGACTTAACATCGACAAGCTCTTTAAAAATCTGGTACAATTTCAATCTCTATAAATTATCAATTAAAACAATTGATTAGTTTTAGA # Right flank : ATAAGGTTAGCGGAGTATTTGACGCCATTTCGGTGTTCCCCGCAGGGCGGGATCGCACTTTGTTAACAAATATGATCTAATTGTGCCAAACCCTCAGCAGCACAGTCATTTTGAACCTTATTGAACACTTATCTGTTGTAGAAGATACTCGCTCGGACATCAACCAAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTGCCCACGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTGCCCACGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.30,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //