Array 1 852448-851820 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LT992491.1 Vibrio cholerae strain 4295STDY6534200 chromosome 2, complete sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
    852447	    28	 100.0	    32	............................	AACGGGCCAGCCCCGCCCTTGGTGCTCTCGGG	
    852387	    28	 100.0	    32	............................	ATCCTCTAAATTTTCAACCGTTCCTTTATTAG	
    852327	    28	 100.0	    32	............................	TGCACGATACTATCACCAACGCCGATGATTGT	
    852267	    28	 100.0	    32	............................	TTTTAGGGCGATAGGGATAAAATTCTCGTATT	
    852207	    28	 100.0	    32	............................	TTTCAGGCCGATAGTGAAGTCGTACTCACCCT	
    852147	    28	 100.0	    32	............................	TAGCACGCTAGATGATGAGTTGTAATAGCTAA	
    852087	    28	 100.0	    32	............................	CGTAGATTTATTAAAAATGGTGATCTTGCTGG	
    852027	    28	 100.0	    32	............................	GTTAACTAAATACATAGAAGAGTGAGGGGGGA	
    851967	    28	 100.0	    32	............................	AATCCTCAGTGCGTAAAATTTCATCAATCTGC	
    851907	    28	 100.0	    32	............................	GTCAGAGTTTCGACATCACGATTGAGTATTTC	
    851847	    28	  96.4	     0	........................A...	|                               	
==========	======	======	======	============================	================================	==================
        11	    28	  99.7	    32	GTTCACTGCCGCACAGGCAGCTTAGAAA	                                	       

# Left flank :   TAACTAGAGTCTTATATACTCAAGCCCATGTCGGAACGGACTATTTAGTAAGGTTTTTGACCTTTGATATTGCCTTACATGAATTTTTTAAGTCTATCAAAATCAATAGGTTCTCTCCAATTTTCAATGGATATGAAAGCGGAGTGTTCACGGATCTCGGTTTTAGTAAAAAAATATTCTCTGAAATTGATGATCAGGAATTTGAAGAGCTATCACGTATTATTTTAAACACATAACAAACGCTTCAAGAGGGACAGCCAACGCGTGGCATTGTTACTATGCGTTGGTTTTTGTTGTTACGGTGTTATGCGGTAATTTGGTAGTAGCGTTGGCTGCCCCTTAAGCGGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAATTTTAAGTTATTGATTTATATTAATAATAAATCTAGCAAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTATTATTAACAATAGGTTACTGCTAAAGTTTCATA
# Right flank :  TATTTATAACTTAGGCATTTGGGATCGGCCAGTTAACAAACGCCTTAAAGGGACTGTCAACGCGTGGCGTTTCCAGTCCCATTGAGCCGCGGTGGTTATGGTTGTTGTGATTGAGTTTAGTGGTAATGCGTTGTCAGCCCCTTAGGCGGGCGTTATATTTCTTTTCAGTTCAACCATCAAAAGGATTCATCATGAACGTGGATAAGGCGAAAAAACGCATATTGAAACGAGTACAAAGAGGTTTCAGAGGTTATCCGCAAATATCATTAGAGTATTTCGGTGAAACGACCGATTTGGCGACCGAAGTAGTCATCACTTTTGTTCCTGAAGAAAATGCCGAACCACAAATTCAGAGATTTACGAGTGACAAAGATGTCCGTGAAGATGAAGCGATTCAATCGGTATTGCTAAAAATCATTGAACGAGCAGAAGCTGCGACTGTTTTAGAGAGCCGAGAAATATCGGTTATTTAATGATTTTTGGCAATGCTCAACGTTCTA

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGCACAGGCAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [60.0-78.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.92   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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