Array 1 2343-469 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUHO01000008.1 Coprobacillus sp. AF13-15 AF13-15.Scaf8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================= ================== 2342 36 100.0 30 .................................... TAAAGAAATTGTTTGTGTTGAACCTATGGA 2276 36 100.0 30 .................................... AGGGTCCCGATGTTTCTCTTCCACTTGTCA 2210 36 100.0 30 .................................... ACGTTTAAATGTTAATCCGCCTGTTTTTCG 2144 36 100.0 30 .................................... AAAACTCCGCTGCTGGCGTTCTGTCAGTAG 2078 36 100.0 30 .................................... TTCTAACCCCGGAAAAGATGAAACGATTGA 2012 36 100.0 30 .................................... ATACGCTTCTGACAGACATTGTCAGAGAAC 1946 36 100.0 30 .................................... TCCTTGAAAATAAACTGCTGTGCGAAGAAT 1880 36 100.0 30 .................................... GAGATGTCATAGTTCAAATAGATTACCTGA 1814 36 100.0 30 .................................... TCAAGGATTACTACAAAAAAGTATTATCAG 1748 36 100.0 30 .................................... AAATGGAGATGGAACTTACGAACCATATAC 1682 36 100.0 30 .................................... AAATGGAGATGGAACTTACGAACCATATAC 1616 36 100.0 30 .................................... CGGTCACATTTCAAGTCGTGCTTTGTATCG 1550 36 100.0 30 .................................... CGGTCACATTTCAAGTCGTGCTTTGTATCG 1484 36 100.0 30 .................................... TTCTTATTTACAGGATGAGAGAAAAAGAAG 1418 36 100.0 30 .................................... TATGTCGTCAAGTACATAAACTCTATAACA 1352 36 100.0 30 .................................... AGATTATAACAATGATAGAATTCAGGTTCA 1286 36 100.0 30 .................................... TATTAAAAATAGGGATATTTAAAACAATAC 1220 36 100.0 30 .................................... ATTTTTTTAGATTTAGATAAAGAGCCAACT 1154 36 100.0 30 .................................... TTAAAGATTGTCCAACAATCGAAAACTGTA 1088 36 100.0 30 .................................... TTGTGAAATTACTACAGCAATCCATGCTGA 1022 36 100.0 30 .................................... AATTGCTGATGGAACTATTAGTTTTAATTA 956 36 100.0 30 .................................... CTTTTTTTACATCTTCTATATCGCATATAA 890 36 100.0 30 .................................... TACAGTGATATGGTGTTAGATTCGATGCAA 824 36 100.0 30 .................................... TAAAAGTTCTTGTGGTATATCTTCTTCAGT 758 36 100.0 30 .................................... TAAAAGTTCTTGTGGTATATCTTCTTCAGT 692 36 100.0 30 .................................... AATTCAACTATGTAATGATATATTAAAAAC 626 36 97.2 81 ...................................T GGAACAATGTGATCAATACAAGGTGACAGTGTTTTAGAAATATGTTATTTTGGAATAAAAATATTCTAGCAAAAATCCATA 509 35 86.1 0 ......T.-..................A..A....T | T,A,TAT,T [479,481,491,499] ========== ====== ====== ====== ==================================== ================================================================================= ================== 28 36 99.4 32 GTTTTAGAAGTGTGTTATTTTGAATGATTACAAAAC # Left flank : TGATAAAACTATTATTACTAAATTATATAATAAGTTATCTAAAAGTATAATATCGAATGTAGAGATTGATAATGAATTAAAAAAATATTTTATGAAGATTTCAAATATTTTATATGATGAAATTGAATACTATAATGTTGATATTGATTTAAATGAAGAAATAGATTTAGTAAAATATTTTAAATTAGCTGGAATTGAATTTGATAATAAGCATAATAATCTAATCGGAAAATTTATTGATATATTAGAGATATATTCAGAATTGTATGATCAAACAATGATATTTATTAATGTACTAACATATTTTTCAAATGAAGAAATTAGAGAAATATTAAAGTATATAACTTATAAAAAAATAAGTGTTTTATTTTTAGAAAATAGTTATAATAGGAGTGTGTATTTTGAAAATAAATATGTCATAGATGATGATTTCTATGATTATATCATTCATGATGACAAAAGTTAGTGTTGGCTTTTATAACTTTAAAACCTGATTTGAG # Right flank : TCCAGAGATTTCTTCATCTCTGGATTAAGTGTATTTAAATATAAATTTATAATATATAACTTAATTGCCCATCTGAAACAGGTGGTGATTAGGTGTCAAGTTTTGTACATGTAAAAGCCATAATTTTACTTATAAAATTATGGTTTAAATTTTATGAATTCAAATCTTATTTAAAAAGATGTGTCATATGGTTTATTAAGATATATAATAAAAATATTTATATAAAATAAAAAACAACCCGAAGGTTGTTGCTTATTAAATGGCGTCCACGAAGGGATTCGAACCCCTGACCGCACGCTTAGAAGGCGTGTGCTCTATCCAGCTGAGCTACGTAGACATTACTTACTTTCAACTGCTCATATATATTAGCATGAATATGAAATGATTGCAATAAAAAATTACAATTTTTTTAAAATTCTAAAGTGAAAAGTTAAATTCCACTTTAGATATGACAAAGTGGATTTTAGTC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTGTGTTATTTTGAATGATTACAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //