Array 1 28392-29458 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQXW01000009.1 Nissabacter archeti strain 2134, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 28392 29 100.0 32 ............................. CACCTGCTACCTGCTCCACTTTCGGCGGGTTC 28453 29 100.0 32 ............................. TCTGGGCTTACGCTGTCATCTTCAGTGACCGG 28514 29 100.0 32 ............................. CGATAACTGCGTTCGGGGCAATTGCATCATAT 28575 29 100.0 32 ............................. TCAACATTGGGTGGCATCAGCTTGTCAAAAAC 28636 29 100.0 33 ............................. GGGACGTGACGATCACCTGGCTGGATAGCGTTC 28698 29 100.0 32 ............................. TTTCCCGGATACTCCAGGGCGCTTGTGATTCT 28759 29 100.0 32 ............................. GTGAAACGCTGGTAACGGTAGTGCTCAGTGCC 28820 29 100.0 32 ............................. AATATGTTGGCTCCATTGTGCTGGAGATTGAC 28881 29 100.0 32 ............................. GTCGTCTTGACAGCCTTCTTCACTAGGCGCAA 28942 29 100.0 32 ............................. TTGACAACCATCACCTTGACGCGCTTCGAATC 29003 29 100.0 32 ............................. CGCCAGCGCCAGAGCGAGGGAATCAGGCTGGC 29064 29 100.0 32 ............................. CCGCCCAGGGTTTCCCCGCTGACTACGTTATT 29125 29 100.0 32 ............................. CGCTTGAAGTTCCAAGGGCGATCTCAAAAGCA 29186 29 100.0 32 ............................. TCTGCTGCGTTGTTTCCCCAGGCCGTTGGGCA 29247 29 100.0 32 ............................. ACGTCGCCCGGCTCGATCATCCCTTTCAATGT 29308 29 100.0 32 ............................. CTTTCTTTTGAATCCTCATCAAAAGAAAATTC 29369 29 100.0 32 ............................. GGTTGAGGCGTAGTGTCCACGTCTAACAGAGC 29430 29 72.4 0 A..........TTAT.......C....TA | ========== ====== ====== ====== ============================= ================================= ================== 18 29 98.5 32 GTGTTCCCCGCGAGAGCGGGGCTAAACCG # Left flank : AGTGCTTGCTGCCGGGGATATTCTGCCACCCCAACCGGCCCCGGATATGCTGCCGCCGGCAATTCCGGAGCCGGAGATACTCGCAGACAGTGGGCATCGGGGGCATTAATCGTGAGCATGTTAATTGTGGTCACAGAGAATGTTCCTCCACGTTTGCGCGGCCGGTTGGCTGTCTGGTTACTGGAGGTACGTGCAGGGGTTTATATCGGCGACACTTCACGGCGAATACGCGAAATGATCTGGCAGCAAATCGACATATTGGCAGAGGAGGGCAACGTCGTCATGGCGTGGGCGACTAACACAGAATCGGGTTTTGATTTTCAAACGTATGGCGTTAACCGACGGATTCCGGTGGAATATGACGGGCTAAGGCTGGTTTCATTTCTGCCCATTGAAAATCAATAAGTTAACGCTATCGCCAAGGGTTAAAATTTAAGCAAAAAATCGGTGGTTTTTTAGAGAGGTAAAAACTCCTTTTAGAACAATTATCTACTTTTAGA # Right flank : ACACCTGTCCCCGCTTTGTACATTTCGTTACGCAGCGACACCAATCACTCACGGAGCGCTGACCCTAAACTGCGTAGACTCTCCTCACCGGCCTACTTCAGGCTGACTCCAACACGCTGAGGAATGTTATGAAAAAGATCGTCGCTATGATTGTTGCCGCTACCCTGGGTATGTCCTCTGTAGCGTTTGCTGCGGAAACCGCTAACCCTGCACCGGCGGCTGCCGCTGCAACCACCACCACGGCACCGGCGGCCAGCGCACCGGCTGCGAAAACCGTGCACCATAAAAAACATAAGAAAGCCGTTGCCCAGAAAGCCCAGGCCGCGAAAAAAACACACAAGAAAGTGACCCACAAAGCGCCGGCTGCCCAGAAAGCCCAGGCCGCGAAAAAAACACACAAGAAAGTGACCCACAAAGCGCCGGTTGCCCAGAAAGCCCAGGCCGCGAAAAAAGCACACAAGAAAGTGACCCATAAAGCGCCGGTTGCCCAGAAAGCCCAG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGAGAGCGGGGCTAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGAGAGCGGGGATAAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.90,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 22216-23503 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQXW01000002.1 Nissabacter archeti strain 2134, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 22216 28 100.0 32 ............................ TGTGATTTAATCTGCGCCTGCGCATTGTTGCG 22276 28 100.0 32 ............................ TCACACGTGGGTGTATACCAACGATGACCCCA 22336 28 100.0 33 ............................ AGCTGCTTGTGCTGCTGCTGCCGCTTGTGTCGC 22397 28 96.4 32 ....................A....... AATATTGAGGCGATGACGCGAGAGGCCAGGGG 22457 28 100.0 32 ............................ CGCAGAGACCGCGCCAGCAGCAGCACCAGGAG 22517 28 100.0 32 ............................ TCAATCAGTCGGCGCGCCTCTTCGAGTGGAGA 22577 28 100.0 32 ............................ TTGAGCCTCGACGAACTTCGGGCTGCGGCCAA 22637 28 100.0 32 ............................ GCGAGACGCACCCAGGGCAGGAAAGTGCCGAA 22697 28 100.0 32 ............................ AAGTGCGGTAAGCCAGACGCGGCCAGGATAAC 22757 28 100.0 32 ............................ GGATGCGAAGACTGCTGACCAGGCAAGCAAAA 22817 28 100.0 32 ............................ AGCACAATGTTTCCGCCCCGGCTGGCGCGAAT 22877 28 100.0 32 ............................ GCAAAGCCCGGCGCGCCGGAAGCGGTGCTTTC 22937 28 100.0 32 ............................ AGGAGAACGCATTGCCGATTCTGTGGGACGAC 22997 28 100.0 32 ............................ CTAAGGACGTATACAGCTCAATCGTGATCGAA 23057 28 100.0 32 ............................ TCGTCGAGATTGAACCGCGCGTCTTTGTTGCG 23117 28 100.0 32 ............................ AGGTGCGGTCAAACACCACCACCACGCCCGCA 23177 28 100.0 32 ............................ CAGGAGCCGAGCGAAGCCAGCCAGGGCAGAAT 23237 28 96.4 32 ...........T................ GGAGCACTATACCGAGGGAACGCTGATTGCGG 23297 28 92.9 32 ...........T.G.............. AGCAAAAAAGGCGGTTTTGACCCGTCAGAATC 23357 28 96.4 32 ...........T................ CGAATCGCCTGCAGCTCCTCAATCGTCCAGTG 23417 28 96.4 32 ...........T................ GTTAAAGGAGCCAGCACCTACGGCGGCCCGGT 23477 27 96.4 0 ........................-... | ========== ====== ====== ====== ============================ ================================= ================== 22 28 98.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CGCATTGCATACGCTGGAGTCTTTGCACTGGCGTACCGGCCTTAGCGATTACTGCGCTGTTTCAGCGATCACACAGGTCAGCGGGATCAAAGGGTGGCGCACAGTAAGCCGGGTGCAGGTGAAAAGCAGTGCCGGGCGCTTATTGCGGCGCTCAGTGAAGAAAGGCTGGATCAGTGAAGCAGAAGCGGTACAGCGGCTTGAAAATAGTCAGGAACAGCGAAGCGACTTGCCCTGGCTGGCCGTAAAAAGCCTTTCCAGCGGTCACCACTTCCGGCTGTTTATCCGCCACGGTGAACTCCAGCCCGCCGCTACCGCAGGGGAGTTTAGCTGTTATGGCCTGAGTAACACCGCCACCATCCCCTGGTTCTGACCCTTTTATTTCCGTCAAGGATAAGTTGTTGATTTATTAGGGTCTAAACATGAGGTAAGAAAAAAAGGGTAAGGAAGAGAATTAAAAGTATTTTTATGTAATAACAAAACGTTACGAAGCTGGCCGATCA # Right flank : AGGCTGGAGACAGTTTGATGGAGAGTCCAGACGCAGAAAAGCAAAAACCCGCCATAAGGCGGGTTTTCTGAATAAGTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCATTGCCGGAAAGTTAAATTTTTTGCCTTTGTGTTACAGAGATGTGAATAATCGCTAACGCATACATCCAAACCATTGTTTTGGATGTGCAAAATGACAATACTTCCCGTTATCTCTCCCAAAGGTGGAGAAGGCAAATCCACGTTTGCTGCTTACCTTGCCGGTTTTCTTGCCGATGCTGGCCTGAATACCCTTCTTGTGGATGCAGACTATTCCCAGCCCACAGCCAGCAGTATCTTCGCGCTGGAGCATGAATCCCCATTCGGTCTCTATGAATTGTTGATGCAGATGGTCAGTGACCATACGCAATGCATTTCGCAGACCGCCATAAAAAATCTCGATGTCATCTACTCAAACGACCCGGACGAACTGTTGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 364677-367150 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQXW01000002.1 Nissabacter archeti strain 2134, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 364677 29 100.0 32 ............................. TGCAGTGCTGCAATCACCGCAAACGCCTATCT 364738 29 100.0 32 ............................. GACGCTTTCCGGTCTATGCCCGGCGTACTCGA 364799 29 100.0 32 ............................. AAGGTGGTCACATACCAATTTCCGCCCCCGCA 364860 29 100.0 32 ............................. GCTCTACTAACATTAAGCTGGCATGGAAAGAA 364921 29 100.0 32 ............................. TCGGCCCTCAAAATAGCAATCCCCATATTAGG 364982 29 100.0 32 ............................. CCGAACGTCAAACTGTCTGGGATGTCGGCGAT 365043 29 100.0 32 ............................. TCAGCGATGAACCCTAATTTTCCGATCTACAT 365104 29 96.6 33 ............................T GTCGGATGTTTTTCAGGCATATCCGGGATACCT 365166 29 100.0 32 ............................. TTCGCGCGCGTGCTGTCACCGTCTGAACCAGT 365227 29 100.0 32 ............................. ACGCACGAAAAATATAACGGCGAGGTGAACCG 365288 29 100.0 32 ............................. ATTATAAAAAGACCTGTCACAATGTCCGGCCC 365349 29 100.0 32 ............................. ACAGGGAGGGCCAAGGGTTTCAGCCGGGGTAT 365410 29 100.0 32 ............................. TAGCTGATCGCTTCCAAAACACGCTCGGGATA 365471 29 100.0 32 ............................. GTTGGTGGCGTGGCAACTTCTAATCAGTTCGC 365532 29 100.0 32 ............................. CCGAAGTGTTTTTGCGCTATTTCGACGATATA 365593 29 100.0 32 ............................. CCTGCTAACAGGAGAAAGAGATGAGCAAGTTC 365654 29 100.0 33 ............................. AAATCGCGGCTTTAATTCAGGCTGTAGGATTGC 365716 29 100.0 32 ............................. GAAGTATACGACATTCGTAAATCAGAATTGGA 365777 29 100.0 33 ............................. CCGGTCAGGGGTGGTTCGCTTACGTGTGCCCGC 365839 29 100.0 32 ............................. GACGAGCAAGTCCGTCGCCTGAACGATTCGAC 365900 29 100.0 32 ............................. TGTTGTCGGCCAGGCGGATGCGCATCGGATGA 365961 29 100.0 32 ............................. GGAATACCTACGAGGACTACGGCAGCGGAATT 366022 29 100.0 32 ............................. ATGTAAGAGTCGGGGTTTGCGTGATCAGCCTC 366083 29 100.0 32 ............................. TGTGTAATATCAACAGGAATGCCGCTGGCCAG 366144 29 100.0 32 ............................. GGAAATTACGTTTCCCCAGTTTCGTGCGTCAA 366205 29 100.0 32 ............................. CAGAAATTAATCCCCAACGTACAGCCTATGAT 366266 29 100.0 32 ............................. GGGTGGATAGGTGCCGGTCTCAAGGCAGACGA 366327 29 100.0 32 ............................. CAGGCCAACATCTACGTGTGGGGCTGGCAGCC 366388 29 100.0 32 ............................. AAACCGGTTGGCCATCGCACCGCATCACCATG 366449 29 96.6 32 .....T....................... GTGCCGCAGTCAGTGATGACATTCTTGTGTTG 366510 29 100.0 32 ............................. GGTTATTGTTTTCACACATATAGAATTCTCCA 366571 29 100.0 32 ............................. CGGATAGCCCGGCGGCAGGAGGTGCCGTATCT 366632 29 100.0 32 ............................. CTCCCGCGGTATTCAATTCCTCTCTTTGACTC 366693 29 100.0 32 ............................. GCCGCATTGTCATGATTAATCCCAAACAGCAG 366754 29 100.0 33 ............................. ACTTTGGGCTTGGTGCAGAGCCTGCGGCCGGGC 366816 29 100.0 32 ............................. TTGGTCCAGAACTGTGAGGTGCTTTTCAGCGT 366877 29 100.0 33 ............................. CCCGAGCCGATGATGATCTTGCCGTTCGCCAGC 366939 29 100.0 32 ............................. CCGAATTGGTATATACAGATACAAACTGGTGG 367000 29 100.0 32 ............................. GTGACTGAGTTTTGTCACGCCCGGACACGCAC 367061 29 100.0 32 ............................. CGCGCGGCTCATCGGCAAAGGCGCGGCTTGGC 367122 29 82.8 0 .....................A..T.GAC | ========== ====== ====== ====== ============================= ================================= ================== 41 29 99.4 32 GTGTTCCCCGCGAGAGCGGGGCTAAACCG # Left flank : CAGCGTTCCGGCGGTGATCGCCGTGAGCCGTGAGCCGCTGATTGTCTACTCCGCGATGATGTTCGCCATCCTCGGCCTGCGCGCGCTCTACTTTGTGCTGGAAGCGTTGCGCCGCTATCTGTCGCACCTGGAGAAAGCGGTAGTGGTGTTACTGTTCTTTATCGCCTTCAAACTCGGCCTGAACGCCAGCGACCACCTCTGGCACCACGGTTACGAGATCGGCATCAACACCAGCCTCTATATCGTACTGATTGTGCTGGGCCTCGGCATCCTCGCCAGCGTGCTGTTCCCTGCCAAAGAGAAGTAATTCTCTCAGCAATCCTGAAAAACCCCGGCTTGCCGGGGTTTTTCTTTTTCCGGCTGGTGAATACCATAAAACGTATTCTGAATTTTATAACGTTCTGAAGAATCAATGATTTATATCGCATAATCATCGTAAAAAAATCGGTAGAATCTTAGCTTTCTAAAAAAGTTTTTATAATCAACGAAATACGGTAAGA # Right flank : CTATGACTGATCCTGTAATATTGTAGTAATCCAATATGAGAACGCTGTCTAAACGCCTGATATACACATTATATAATGTGACTATTATTTTAATTCAATGTTATTGATTTAATCATTCCCTGTTTTATTTATTTTTCATGACTATGTTTATCCTCATGTTTATTGATTTTTAGTATTTGTTATTGGCTTTTATCAGGCGCAAACTATGCAAGCTTTTCTAATCAATTAGGAGTTTAATAATGGCTATCCCTCCCTATTTATGGTTAAAAGATGAGGGTGGTGCACTGATTAAAGGGTTGGTTGACGTGCGTGGCCGGGAAAACAGTATTGAAGTGCTAAGCTTTATGCATGGAGTGGACATTCCTACCGATGGGCACACAGGTCAAATAACCGGGCCGCGAATTCATGATGCATTAGAATTTGAAAAAGAAATTGATAGTTCAAGCCCATTGCTTTATAAAGCATCAACCACCGGTCAAACACTAAAAAGTGCTGAGTTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGAGAGCGGGGCTAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGAGAGCGGGGATAAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.90,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //