Array 1 492135-492366 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV880637.1 Thalassospira sp. TSL5-1 scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 492135 36 100.0 29 .................................... TCGGCTGGCGCGGATTTCGTCGGCCACAT 492200 36 100.0 30 .................................... AACAACGCGCTTGATAACGAAACTTCACGC 492266 36 100.0 30 .................................... AACTATTGGAGGACGAGGAAGAATGATCAT 492332 35 77.8 0 ...................G.CG..C..-T.G...T | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 94.5 30 ATTGTAGCAGGTTCGATTTTAGAGGGTAGCTACAAC # Left flank : TCAAACAGGCCGATCCGGTTTTTCAGGCGGCAAATGCGCTTGATATTGAATACCCTGCCGATGACAGCATTTTCATGGCAAACAGCCTTGGCTTGCGTGGCCTTGTTTTGCGCGCCCGCAATGGTGAACGACCCCTGGTCTGGATGGTCAATGGCGTGCCGTTACCCTCCGACCCGTGGCAGCGCCATGTGCGCTGGCAACCCGACGGGCCGGGTTTTTATGACATTACGGTGCTCGATAAAAACGGCGTCGCCCGCCACCGCCATGTCACCATCCGGGCTAACGCTCCCCTGCTGTCCCCAATCCATCCCGTTTCACTTTCCACCTCACGGTAAAACTGACGGCCATGTGTCGTAAGTCGGCATGAAAATTGCCGGTTTCCACCGATCAAAAATGAGTCATTTTTGCAAAAAATCAGCGAAAAATCGGGCGAAAATGCTGGTTTTTGACTCAAAAAAATCCCGCAACATACTGAATATGCTGCGGGATTTGGTGTTCCT # Right flank : TCACCATCAATAAATGGATGGTTTCTGGCAATACCTTCCGCATAGCCAGCAGCGAGTTAAAAAGTATCACTCTCGCCATAGGCATATTGATTTTTGGGGCGCGCCAACGCCGATTCCAGCAGGGACGCATCACGTAAACCTTGTGAGCCACCCGCCAGATTTACCACCGTTTCATGAATATGTTCGACGTTCTGGCGCGACAACCATTTGGGATGACTCACCGTTTGGCCAATTCGACCAGAGTGTCTTTGTGGTGGTTTGCACGACGATGGACAAGATCCTGGAAATCATCATCCCGATGCTGATCCTTGCCTGTCAGCCGGTGGTATTCTTCCGCCGAGATCAGAACCAGATGGTCACGGTTTTGATTGGTGATAATGACGGGTTCACTGATCGCCGTATTGCTGAATGTGCTGATGTCTTTTTCAAATTCGGTGGCTGTAATCCGTGTCATGGCCGTGTCCCATTTCTTTAAATGCCGCAGAATGTCGAGAAATCCT # Questionable array : NO Score: 2.58 # Score Detail : 1:0, 2:0, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGTAGCAGGTTCGATTTTAGAGGGTAGCTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,-0.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 555342-555708 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV880638.1 Thalassospira sp. TSL5-1 scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 555342 36 100.0 30 .................................... AGACCTTTTGAATGTAATAGACGGTGCAAA 555408 36 100.0 30 .................................... ACCGCGCCGATGTTTATTACCCTTACGATG 555474 36 100.0 30 .................................... CAAAATGTTTTTCGCCACGATCCTTGGCAT 555540 36 100.0 30 .................................... CAAGGACATTCGCTTGAGGACTGAGATCGT 555606 36 100.0 30 .................................... TTCGTCATCGAACATGTGTATCCCCTAAAG 555672 36 86.1 0 ............................TGA..GG. | G [555704] ========== ====== ====== ====== ==================================== ============================== ================== 6 36 97.7 30 GTCGACGTTCATCCCCAAATTGAGGGGAACTACACC # Left flank : TCGCCCATGACCGGAAACTGAAAAACGCTGTGGCAAAATCGGTGATCGAAATGCTGGCCCGCGAGGGGTTTGACTTGGATTGGGGCATTCAAACCGATCGCGGCCAGCATATTTTAAGCCACGGTAAAATCCGCACGCGGCAGGCACAGCATTTTCAAAAATCCCGCCTTCATATCGTAAAGAAATCGGCCAAGCCGGACAAAAATGATACAGTCAAAATTCGCGAAAACCTGCATGGTGATGCGATGGTCGAACGGGTTGTGCAGTTGTTTGCGGCTCAGGTGCAAAAGCGATATGATATTACGGTGGAAAAACGGCTGGATCATTTGTTCCTGAAACCACAGGATCAGAAGGGGAAAAACGGAATACACACGCATAACGGGTGGTCAAAAACGGAGAAAAAACGACGCCCAAGCCGTGAAAACAGGAAGGGAAATCATGAAAACTGACTCAAAATTTTCCGATAAAGCATTGAGATATATCTGGAATTAGGGGTTCCT # Right flank : CGGTTGCCGGTTTGAATTTAACAGTTCGGTAAGTGTGTTTTGGTTTTGTCAGGTTGCATGATATAGTGTTGCCTGCAATCCGGGATCGGATTACCGTTTTATCGTGGCAGGGGATTGGGCTGCTACATCACCCGTCTGGCACGCGGGCATTCAGGGAGCGGGGGATCAGCATGGTCTCTGGCGTTTATGGTGCAGGCACTGTTCGACACGCATTTGCCCTGATGGTCGGGGCAGTGTCGCTATTGCTGTTGCTGTTAGGGACAGTCGGGCTGGTTTTTGTGCCCGCACGGGCCCATGCGGATGAATGCAGCACCCTTTTGGTCTCGGGAAACCCGGATTACCCGCCTTATTTATGGCCTGATCCCGCCAATCCGGCGGAATTGATTGGCGCGAATGCCGAATTTATCAAAATGGTGGGTCGGGAAATTGGCGTTAAGATGCAGGTGCGCCATGAAGGGCCGTGGGGCCGGGTGCAGGAGGAGGTGCGCCGGGGTAATATC # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGACGTTCATCCCCAAATTGAGGGGAACTACACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.10,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 1386269-1386636 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV880638.1 Thalassospira sp. TSL5-1 scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1386269 36 100.0 30 .................................... CTGTCGTCCCTGATCAAACATGTCGCGTTC 1386335 36 100.0 30 .................................... AGCCTGAAACCGTGTAAGTAAATTGGTTAC 1386401 36 100.0 31 .................................... CGCTCTGTCGCATTTGTGCCGGTTTACCGGT 1386468 36 100.0 30 .................................... AAGCTGCTATTGAATGGTGGCATTTCATCA 1386534 36 97.2 30 ..........................G......... CAAATGCTTCGAAAGTGTTCCCTGTTACGA 1386600 35 88.9 0 ..........................G..-.T...T | GG [1386631] ========== ====== ====== ====== ==================================== =============================== ================== 6 36 97.7 30 ATTGTAGCAGGTTCGATTTTAGAGGGTAGCTACAAC # Left flank : TACGGAGCTTAGCATTGCCGGGCTGCATGCCTGGCGGCTGGATGTGAAACAGATGCGCTATGCCTGCGATTTCTTTTATGAAATTTACAGTGGCAAATCGGTGCGCAAGTTCCGCAACAATCTGGCCGAATTGCAGGATATTTTGGGCCAGCTTAACGATGCTGCCGTTGCCGAAAACAGACTGGCGGTTTTGCAGTCTACCCTAAGCAAGCAGGGTATGGTTGGGGTGGGTCGCCTTGCCGGCTGGTATGGCGCGCGCGCCGATTACCGCCTTCAGGGCATTGCAGAGGCCTGGAAGGCTTTCGACAAGCAAAAACCGTTCTGGCGCTAACACCCGGCAGCCTCCAAAGTACGTCAGAATGGCGGGCCTTTGGATGGTTTTAGCAGGCGAAAAATGACTCGTTTTTGCGAAAAACACACGATTTTTCGGGAGAAAATGCCGGTTTTTGACTCAAAAAATCCCGCAACATATTGAATATGCTGCGGGATTCGCAGTTCCT # Right flank : TTAGCCCGTTGATCACAAATGCGGGTTATGACGCTCCCTCATTCCCGGCTTTCATCTGCTGATAGGCTTCCAGGGCGCGTTCGCGTCCGCCTTTTAAATCGACGATTGGTTCGGGGTAGGTTTCGCCAAGGGTGATGCCAGCCCCTTTTAACATCAGGGTCGGGGCTTCCCACGGTTTATGGATGTGGGAATCGGGCAGGTTGCGCAGTTCGGGCACCCATTGGCGGACATAATCGCCGTTTTCATCAAATTTTTCGCCCTGAAGAACCGGGTTGAAAATGCGGAAATAAGGTGCTGCATCGGCACCGCAGCCGCCAATCCATTGCCAGGAAAACGGGTCGGCTGCCGGGCAGGCGTCAACCAGCGTATCGTCAAACCATTCAAGCCCGTGCTGCCAATGCAAAAGCAGATGTTTGACCAGCAAAGACCCGACAATCATGCGCACCCGGTTGTGCATATAGCCGGTATGCCAAAGTTCGCGCATCCCGGCATCAACAATC # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGTAGCAGGTTCGATTTTAGAGGGTAGCTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,-0.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //