Array 1 874844-875274 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP053792.1 Streptococcus canis strain HL_77_1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 874844 36 100.0 30 .................................... AACTGAATTTTGAAAATAAGAACGCAAAAA 874910 36 100.0 29 .................................... CTTTACCATTCAAGACGTTACTACGAGAA 874975 36 100.0 30 .................................... CAATGCTTACGCCATGTCGACACATTGATA 875041 36 100.0 30 .................................... TAATGATAGCAATGACCAATTGGAGCTTTA 875107 36 100.0 30 .................................... CCAAATCTCGCAAGAGATACACGACAGGAC 875173 36 100.0 30 .................................... TTTATAGGAAAAATTTCTTATCCAGAAGTC 875239 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 100.0 30 GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC # Left flank : CACAGCCTGACGACGTCCACAGCGAGCCTAGTTCGCCTTATAGTAATGATAGCACTCAGTTGGCTGAATGCCCTTGTTTGAGGAAAGTCACTACCTTATGAATGGTTTGACGGCTTCGCTTAAGTGATTGCGCAATTTCGAGGACAGAAGTATCTTTCTCAACAGATGCCTCTATCATTACGAGCTCATTTGTGGTAAGAGGGGCATGGGTCATTTCTGTTACTTCCTTTCAGACAAATGTGATGTTTATCTGAGCCTAACATAGATGGCTTTTTCTGTCTAACTTAATTTTACAAATTGGGCACATAAAAAATTGTAATGCGACAGAACAAAGGCGAAAAGAAGGTTTCATGCGTTTGTCGTGCTGGGATAAGAAGGGAAGTTGATTCTATAGGTTTTTTGGCGTATAATATAGTTATGAAAAGGGCTGTTTAAGACTAAAGTCTCGCTAAGACAAATAGTGCGATTACGAAAAATTGTGGACGAAAATAGTCTACGAG # Right flank : CTGCTGGTAAAGAAGTTATGTACATTAGTCAGTTTTAGAGCTATGAAAATTTTTTATTTATGATATAATGATTTGTGTGTAAATATGCGCTTCTACGGCGTGTATTTTTTTGTTTCCAAAATATTTTCTGCGTATTTTACCGTGCTTTTTTGCCTTCTGTCGGGGAATTTAGTCGGGAAATATTATTGTCTAAAAAAGCTGAAAATGTGTCTGTAACTTGAACAGATAGTTCATCGTGTACCTGATTATATTTATCAGTCATATACATTTTTGTGTGACCCAATGCTTTACTGAGAGCTTCCATGGGAACTCCAGCAATTATGCTTTGAGTGGTAAAAAAGTGTCGCATCATGTGAGGGGTGACACGAAAACCAACACTCTCATTAACTTTCTCAAATTCATCATTGAGTTTGTTTGGATTAATGAGATTACCGTCTTCCTTAATGCTTATATAATCCCATTCTTTATCTTTGATGATGGAAAGTCGCTTTTTGATAGTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.00,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-A/B/C [Matched known repeat from this family], // Array 2 915678-916109 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP053792.1 Streptococcus canis strain HL_77_1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 915678 36 94.4 30 ....AC.............................. CTATCCTTTGAGCTACAGAGCTGTTTTAAC 915744 36 100.0 30 .................................... AGCCATCTCATTTGTCTTGGAAACAATACA 915810 36 100.0 30 .................................... AAAATTTTTTATAAGTTCATTAATGTTATT 915876 36 100.0 30 .................................... CAAGACCCGTTACAACAAAAACTTGCTCGC 915942 36 100.0 30 .................................... CCAACTTAATCAGATAATAAAAAGCCTCAT 916008 36 100.0 30 .................................... GACAGGCTGACATGATTGAGCTGCTGACCA 916074 36 94.4 0 .................................TT. | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 98.4 30 GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC # Left flank : TACGGAAAATATTTAATGTATCAGTAGATGATTTTTTACCAAAGGATTGACAATATCTAATTTTAAATTTACAATATAATTAATGACATAGCTTAGCTATGAGGGTTGAAAAATATGGTAGTAATCCATAAATTAAACAGACTGCAGTTTTTGCCAGTCTGTTTTTTTTAGTCCACTAAAACAGACTAAAACAAAAAAGTCCTTTTTACGAGACTTTTACGAATATATAAGTAGGAGGTGCTTATGCTAACATACGATGAGTTTAAACAAGCAATTGATGACGGATATATCACAGGAGACACAGTAATAATCGTGCGCAAAAACGGACAGATTTTTGATTATGTATTGTCGCATGAGGAAGTGAAACCGTGGGAAATTTTGACTGAAGTAATAGTAGAAGCAGTGCTAAGGGAATTAGACAAATAAAAAAAGACCTTGTCCAAAAGGTCGTGGTATAGTCGGGGACAGGCGATTCAATCTATTGATATAAAGCCTTTTTA # Right flank : CAATATCGTCCATGGTAACTTGAGAGAGGAATAAAGACAACATCCTTAAGCCTTTCTATTCTTTCTATTAAAATGTTTTCATGTTATAATAGTCAAAAGGAGAAAGAAAGTGGAGCGATGGAACAAACATTTTTTATGATTAAGCCTGATGGGGTGAAACGGGGATTAGTTGGGGATATTTTGCGACGTATTGAGCGGCGAGGGTTTACATTTGAACGCTTGGAGTTGCGGCAAGCTAGCTCGGAACTCTTGGCTAAGCACTACGAAGCCTTGGTAACTAAACCATTTTATCCTGAGTTGGAAGCTTACATGACCAGTGGTCCTGTTTTAATTGGGGTACTTTCTGGGAATCGGGTGGTTTCGTCTTGGCGAACCATGATGGGGGTAACCAATCCAAAAGATGCTCTTCCTGGCACTATTCGTGGTGATTTTGCTCAGGCTCCTGGTGATGATGGTGGCATTTTTAACGTGGTTCATGGGTCTGATTCTCTAGATTCTGC # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.00,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [2-2] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/B/C [Matched known repeat from this family], // Array 3 1247241-1247073 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP053792.1 Streptococcus canis strain HL_77_1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1247240 36 100.0 30 .................................... TGCTTGCCAACCTCTAGTAACAATATTAAG 1247174 36 100.0 30 .................................... TCATCTTTTGTGTACGCTCTGCGGATACCT 1247108 36 97.2 0 ............T....................... | ========== ====== ====== ====== ==================================== ============================== ================== 3 36 99.1 30 GTTTTAGAGCTACGCTGTTTTGAATGGTCCCAAAAC # Left flank : AGAAACCCGAAGTGAAATCGATGATTGACAAATTGGTTGCTACGATTACAGAACTGATTGTCTTTGAATGCTTAGAAAATGAATTAGATTTAGAGTATGATGAAATCACAATCCTGGAATTGATTAAGTCCTTAGGAGTAAAAGTAGAAACGCAAAGTGATACTATTTTTGAAAAATGTCTAGAGATACTTCAAATTTTCAAATATCTCACTAAGAAAAAGTTGCTTATTTTTGTCAATAGCGGAGCTTTTCTAACAAAAGATGAAGTGGCTAGTTTACAAGAGTATATATCATTGACAAATTTAACAGTTCTCTTTTTAGAACCACGTGAACTATATGATTTTCCGCAGTATATTTTAGATGAAGACTATTTCTTAATAACTAAAAATATGATATAATACTCTTAATAAACGCAGTAATAAAGGGGCTTTTCAAGACTGAAGTCTAGCTGAGACAAATAGTGCGATTACGAAATTTTTTAGACAAAAATAGTCTACGAG # Right flank : GTCCTTGACAAAATCACGGTTACCAATATGTTTGCCAAATTTCAAGTTCAAGTTAGCCAGTCTGTAAAAACTCTTTAGGAGATTTATAATTGAGTAGTTTCTTTGGATAGTGATTAATCCAGTTTTCAATAAAAGCGACTTGTTGTTGAGTCGCATTTTTACTTCCCTTTGGTAACCAACGCCGAATGAGTCTGTTGTGATTTTCACTAGTTCCTCTCTCCCAAGAGGAATACGGGTGAGCATAGTAGATATAATCAGGGTCAAAAACTTCTGCTAAACAACTCCGTTATCAGCTGTGATAGAGTTAATCTGATAATCTCTGAGGATAGTTTTCAGAGCTTTGTTCACTGAAGACGCAGATTTATCAGGAATGAGTCGAATGATTTGGTAGCGACTTCTTCTGTCAGTTAGAGTCAACAGACACTCGTTTTTTGCCCTCGTCTGAATAACCGTATCAATTTCAAAATCACCGATATTCTCACGGTTATTGATACTTGCAG # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTACGCTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/B/C [Matched known repeat from this family], //