Array 1 120995-121952 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_OBML01000008.1 Stappia indica strain USBA 352, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	================================	====================================	==================
    120995	    32	  90.6	    33	.G.......C...T..................	GAGCCCTATGTGATCGACCGGGACGCCAGCGAG   	
    121060	    32	  81.2	    35	....TTG....T.......G.C..........	GACGTGCAGATCCCCGAAGACGAGGTCGACAAGCG 	GG [121068]
    121129	    32	  90.6	    34	....T..............T.C..........	TATGCCGAGGCTACGATGGTTGGGATCTTCCATC  	
    121195	    32	  90.6	    36	.C....T.....A...................	CAGAACCGGGTGCCGGTGGGCTTCACGAAAGGCAGG	
    121263	    32	  96.9	    33	......T.........................	TTGACCAGCGTAAGGCGGTTGAGGGTGGTCTGC   	
    121328	    32	  78.1	    33	.C........CGAG.....T.C..........	ATCGTCAACGGAGGGCTGTCCCTTGCTGGTCAG   	
    121393	    32	  84.4	    36	..........CACG.......G..........	GACAAGGCCATGGCCGAGCTGAGTTCGCAGGAGGAC	
    121461	    32	  96.9	    34	........T.......................	CACGTTGCGTCTGTCCAGCTGATGGATGTGCGGT  	
    121527	    32	  93.8	    33	............A........C..........	GGCAACCCGATGCTGGAAGAGCCCCCGCAGCGC   	C [121536]
    121593	    32	  93.8	    33	......T..C......................	TGGGAGCTCAACCGCGTGATTTTGTGGCTGCAG   	
    121658	    32	  93.8	    33	........T.........A.............	ACAACACGTGGAGCGGCGCGCCGCGGATCGTCA   	
    121723	    32	 100.0	    34	................................	TGGCAGCACACCCGCTATCGTCATATCGTGCCGG  	G [121742]
    121790	    32	 100.0	    34	................................	GCCCTTTCTGAGGCCATTGCAGACGCGCCGCACC  	
    121856	    32	  96.9	    33	......T.........................	ACGATCACGGGCCTGCAGCCGCTCGACGGATCG   	G [121875]
    121922	    31	  75.0	     0	..............-......C..C.A.CGTT	|                                   	
==========	======	======	======	================================	====================================	==================
        15	    32	  90.8	    34	GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC	                                    	       

# Left flank :   GGATCGAGGCATCCCGGTCGCCCTCGGCTCGGACAATCTGCCCCCGTCCTTGCTGCATCCGGTGGCGGATCTGGAGCTGCGGCGCGACCATGGCACGGGCGAACATGTTGCCCCCGATCAGGCCCTGACCCGCCGCGAGGCGCTGGCCCTGGCGACCGCCGGCGGCGCCAACCTGTTGCAGCGGGGGGACGAACTCGGTCGGCTCAAGCCCGGCTATCTTGCCGACCTCGTCGGCTTCCCCGGCGACATCCTGACGATGGAGGCCGATGAGTTGAGGCATCTGGAGGCGCGCCTCGCCCTTGTCGGTGGCCAGATCGTCCTGCGGCAGGCCTAGCCCGATGCCGCCTTGCTCGCCTTGCCCCCGCCGCCTGCCTTGCCGAAAAGGGTCGCCTCCGGCAGGCTGTGCGAAAACTCTGGAGGCTCCGGTTTGACCAAGGGCTCTTTTGCCTTCAGGCCAAAGCGGCAATGATGTTGATGGCCCGCCGCGGATCGGTGGCCGG
# Right flank :  TCGTCTGCGCCGCCGCCTGCCTTGCTCGCCTTGCGGATGCGGCTGAAGCTCATGGCGATATGCGCGCGGCGCACATGGGCGGCGGCGGCAAGATCGCCATGCTCCACCGCCTCGGTGATATCCGTCACCTCGCGCTGGAAGGTGGTGAACTCGGTATGGATCAGCTCCTCGAAATTCTTCAGCCGTGAGGCGGTCTTCAGCCAGATACGCGCGGTCTGGTAATACAGCCGCTCGCTGATCTCGCGCAGCGGCGCGTTGGTCGTCAGCGCGTTGAACAGATGGAAGAATTCCATGTTGATCCGCGAGAAGGTGCGCGGGTCGCCCTCATGCACCATCTCGTCGCAGCGCGCGCGGATCTCGCGGAAGCGCGCGATCAGCGCCGCATCCACCGGGGTCGGCGACAGCTTGCCGACCAGTTCGGCCAGCTCCACCCGCAGCTCGTAGACCTGCGCCAGCGCGTCGACCTCGATGTCGGTGACGATGGTGCCGACCCCATGCAC

# Questionable array : NO	 Score: 5.10
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.24,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-7.00,-7.20] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [18-10] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [36.7-25.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.77,0.78   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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