Array 1 514298-512606 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031054.1 Moorella thermoacetica strain 39073-HH chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 514297 37 100.0 35 ..................................... CGTATAGCCGAAAGGCTTGCACAGCCTGGCGTATC 514225 37 100.0 35 ..................................... CTGTCCTGATTAGACCTTTGGTAAGACCGTCTAAT 514153 37 100.0 35 ..................................... CGAAAAATTTTTTGAGGATTTTTTTCGGGCGAGAG 514081 37 100.0 34 ..................................... ACTCGTTCGCCACTCTTTCAAATGGCGAACAAAT 514010 37 100.0 35 ..................................... TGGAAATGTGGTATAATTTAAGCAGGTGAAGGTGC 513938 37 100.0 35 ..................................... AACATATTCTTGGACTTGATCGGATATGGATCTAC 513866 37 100.0 35 ..................................... TGGATGGCAAGGAATATAAGGCCCCGAAGCCGAAA 513794 37 100.0 34 ..................................... TGACGGTGCTTTTAACCCTTCGTCTGATACGCAA 513723 37 100.0 35 ..................................... TGCAGGGCCGGAAGCTAGAGGACCACCGGAAGGTC 513651 37 100.0 35 ..................................... ATCTTGTATCATCTCAATCGTTTTGCCAAATAGCC 513579 37 100.0 36 ..................................... CGAATCCGAATACGGGGGCATATGCTGCCTATTGTC 513506 37 100.0 34 ..................................... TTTCTATAGTCCGCAGCGGAGCCGAAATTCGGTC 513435 37 100.0 36 ..................................... AATGTCTACATATACCTGTCCTGACTCGCCAATGAC 513362 37 100.0 35 ..................................... ATCGATCACGGCCATATGGGGGTTCAGGCCGTCAA 513290 37 100.0 35 ..................................... AGCACAAAATAATCATTTTCATAAACCTCGTGGGC 513218 37 100.0 35 ..................................... TCTGCGCTGCCATTAACGGCTACCTGGAGGGCCTA 513146 37 100.0 34 ..................................... AACCACTAAGTAAGCTTTGCCATCCAACAGAATC 513075 37 100.0 36 ..................................... CCTGGTCGCGCAGGAAACGCAAAACAAAAATCTCAT 513002 37 100.0 35 ..................................... CACAAGGGCCTTGATAGCGACATCAGCGCTAATAC 512930 37 100.0 35 ..................................... CTTTTGTGTCTCTTCCAAGGGCACAGGATAAATCA 512858 37 100.0 35 ..................................... CGTTTAAGCCCCATCTCTGCCGCTTTGTTGTGCAC 512786 37 100.0 35 ..................................... CTGCGAAGTGCCGGAGGGGTTTACTTTGACCAGCC 512714 37 100.0 35 ..................................... CTAACATCAGCCATGGCAGACTCAAAATCCATAGC 512642 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 24 37 100.0 35 GTCGCGCCCGGCTTCCATGCCGGGCGAGGGTTGAAAC # Left flank : CGGTAAATATATCGCTTTTCTTAAGTGGTGTAGATAACATGTATATTTTAATTACTTATGATGTTTCTACAGAAACAGAGGCAGGTAAAAAACGCCTGCGTAAAGTTGCCCAGGTATGTAAAGATTTTGGTCAGAGGGTGCAAAAGTCCGTCTTTGAGTGTTCGGTCAACGAAGCCCAGTTTGAACAGTTAAAGCACCGGCTCTTGCAGTGTATCGATGAAAAAAGCGATAGCCTGCGGATTTATCGACTGCGCGAACCCGCGAAAAAATACATCCAGGAGTATGGCGTCAACCTTACGATTGATTTTGACGCCCCCCTGGTTTTGTAAACCCGCGAACATATAGCAAGGGGCAAAAGGCCGAAAGGTTCGCGTTCTTTGGCGAATCAAGACCTGAAGCTAATTTTAGAGGTGAAGCATAATGAAGTATTCTAATTTAGTCATCAGGTTCGCGCAGAGTAGTAATATAGGGGTTGTCCGCCAAGGGTTTTAGCGCGAAGT # Right flank : AGGACGGCATCAACGGCGTAGCTTGGGTAGATGAGTTATGCCCGGCTATTACGCCCAGCTTACATTGATCGCAATGCTCTCCTGCTCCACCCATTTGCGGTGCTTCAGCATGGCCTGCAGGAGGGGGTGCCAGGGGGCGTAAGCCGGGTCCTCAGCCAAGTGCCGGAGCCTGGCGGCATACTCGTCGCCGAAGGGTATTCCGGCCGGCAAATACCTGGTATAAGTAGTGACATCCATAAGGTAGGGCTGCAAATCGGGAATTAAGTTGCGGCGGATATATTCGCAAATGCGGATGCCGCCGTAGTCCATATCGCCCCAGTGGTAGACCGGGGGCCTGGCGGTGGCTCCAGGGGATTCCCGGTAATCCTGGAGCCGGCGTAAAAAAAGCTGCACGCCGCGGTGGGGGAAGCCGCCGGTATATACTACTAAGCCAGCAGGGCCCTCAACCGCTAAACCCCGGCCCCCTCCCCCTTCCCGGCAAGGTACAGCCAGCTCACTTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCGGCTTCCATGCCGGGCGAGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCGGCTTCCATGCCGGGCGAGGGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-16.30,-17.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [43.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 1792111-1789091 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031054.1 Moorella thermoacetica strain 39073-HH chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 1792110 29 100.0 36 ............................. CTGCGGTAAAAGTAGTACTATAATCAACAGCAGATT 1792045 29 100.0 35 ............................. ATAATCTACAATTATTCCTTCCTTTTCGGCCAGCC 1791981 29 100.0 36 ............................. GGGAGATTTTCAAAGTCTCGACGTTATGCTCTACGT 1791916 29 100.0 35 ............................. AAACTCCACCGTCCCCTCCTGCGGGTCTAGCACCC 1791852 29 100.0 36 ............................. TTTGCCCTTGCGCCCTTGAGTTTTCTGCCCGTCGAA 1791787 29 100.0 37 ............................. TTTAAGCTTATCAACAGCCCCGCAGGCAATGGCGACC 1791721 29 100.0 37 ............................. TACTTACCCGAAGGTCATTGGCCGCGGTGGTATCAGG 1791655 29 100.0 36 ............................. TCGACCGCCTGAAGTCAATTCTCTACGCCAGTAGCG 1791590 29 100.0 36 ............................. CCCGCTCTCCCGAAACCCTGACCATCCCCACGGCAG 1791525 29 100.0 36 ............................. TCGGAGATTGCTGTATTTGTAAATGGGGCAAAAGAG 1791460 29 100.0 34 ............................. GGGTCGTCTTTACCGGTCCGTTAGCCTGCTCCGG 1791397 29 100.0 36 ............................. ATCCCCAGGAAGAACGGCTGCTGGCCGATCCTGTTT 1791332 29 100.0 37 ............................. AGCTTTTCAATGGATGGATTGCATCGACCGTGTTCAA 1791266 29 100.0 35 ............................. TTCTTTTATAGCGGATATTGAAGCTGGACGTAGCA 1791202 29 100.0 36 ............................. TAGCGATGACGGAATAGCCCCGTAAACCGTCGAAGC 1791137 29 100.0 35 ............................. CCCGATAACGCGGAATGAGTGCCGCGAGTGTGCCA 1791073 29 100.0 34 ............................. TGTTAAGGGGCACAAAGTGTTTGTCCCCTTCCGG 1791010 29 100.0 37 ............................. GGTTTATAAGCATAAGTTTCCGTGCCGTGGGCCGAAG 1790944 29 100.0 36 ............................. AATGGATCGTCTGGCATGGTGAAGAAGAGTACGGCA 1790879 29 100.0 37 ............................. TGCGGCATATCAAGCAAAAGAAGTCGATTTACGAAGA 1790813 29 100.0 37 ............................. AAGAAACCGGCGACAAATAAGCCGGTTTTCTTTTTGC 1790747 29 100.0 35 ............................. TATAAACATCAATTAAATCCGCATCAAGCATTTTA 1790683 29 100.0 37 ............................. TCCGGCTCGGAGCCAGGTGGTTTCTTCCGTGACAGGG 1790617 29 100.0 35 ............................. TCCTTTTACTGATGACCCTGAAGGCAATATGAAGA 1790553 29 100.0 35 ............................. TTACTCACCGAGGTTTCCAGTCGGGGCGACAACCG 1790489 29 100.0 36 ............................. TTACGGGGCGTAGGCGGAGAGCCGAAATTCATAAAG 1790424 29 100.0 36 ............................. CAAGCTCTCGGAGCTCTTCTCTCAACATTCCCACCC 1790359 29 100.0 36 ............................. CTACCAGATCGCTTGAATTCGGAGAAGGTCTTTATT 1790294 29 100.0 37 ............................. CTTTTCGTCCAGGTGGTCCAGGCGGCAGGCGTCTTCG 1790228 29 100.0 38 ............................. TTCGGGCAGGGAATAAAATATTTCTGCCGGCAAATCTC 1790161 29 100.0 35 ............................. CGCTCATGTAGAGGTACTTTTCAAACCCGTTGAGT 1790097 29 100.0 35 ............................. CGTCCCAAGCCGCTCCATACGCCACCGGGGTACCC 1790033 29 100.0 37 ............................. TACATTGAGCCACCCAGGCATCACGTTCCCTGGGTGA 1789967 29 100.0 36 ............................. TCATAACAGTAACCTTCCCTGTAGAGGAATTAAACT 1789902 29 100.0 37 ............................. CTTTTCGTCCAGGTGGTCCAGGCGGCAGGCGTCTTCG 1789836 29 100.0 38 ............................. TTCGGGCAGGGAATAAAATATTTCTGCCGGCAAATCTC 1789769 29 100.0 35 ............................. CGCTCATGTAGAGGTACTTTTCAAACCCGTTGAGT 1789705 29 100.0 35 ............................. CGTCCCAAGCCGCTCCATACGCCACCGGGGTACCC 1789641 29 100.0 37 ............................. TACATTGAGCCACCCAGGCATCACGTTCCCTGGGTGA 1789575 29 100.0 36 ............................. TCATAACAGTAACCTTCCCTGTAGAGGAATTAAACT 1789510 29 100.0 36 ............................. CTGGCTCACCGTAATGCGGTATTTGGGTAACTGCAC 1789445 29 100.0 36 ............................. TTAGATATAATAGGTTAAAAAGCACTGGAATATTAG 1789380 29 100.0 35 ............................. TTTTAATCCCGCCTCTTTCAGTTTTACGGCCATTT 1789316 29 100.0 36 ............................. CTGAAGCAATCCCAGGTCCTCATCGGCAAAAACTGG 1789251 29 96.6 37 ........T.................... TACCGGGGGCCTTGCTGCGCATAAAAGTCCAACTACG 1789185 29 100.0 37 ............................. GGCAGTTGATCAAAACTATCCACGGCCACCTGGCAGA 1789119 29 96.6 0 ....T........................ | ========== ====== ====== ====== ============================= ====================================== ================== 47 29 99.9 36 GTGACCATCGACCATAGAGGAATTTGAAC # Left flank : CTGGAAAAGACGATTTTGCACCGCAAGCTAAAAAGGAATATTCGCTATAAAAGTCTTGTCCGGTTAGACTTATATAAGCTTATAAAGCACCTCCTTGGTGAAGAAAAATATTCCCCCATGAAGGTGTGGTGGTAAATATAAGAGTGATCCTGATCTATGATATTAATACTGAAGACAACGACGGCAAACGGCGCCTGGTAAAGATCATGAAGACCAGCCGTAAATATTTATCTCATGTGCAAAAATCCGTTTTTGAAGGAGATATTACCGAAGGGCAAATATCCTTACTTAAGAAGGAAATAATGGCCATAGTTAACATGAAAAAAGACTTTGTCATCATTTATAGCCTCAGGGATGGAGTAAAGCTAAACCGTGAAATCTTGACTGACACCCCCGACCCTACAGATAATTTCCTGTAGTGTAAGTGCAAACTGGCGGTTTGACGCAGGGGCTTTTAAAAAATTGCTAAAATCCCTGTCGGGACAAGCCTTTCATCTGCG # Right flank : AGGGTGGAGATAAAAATCTGGTGATAACGTCAAAGGTGGAGTAGTAATCGGGCTGGGTACCCGGTTGCAAGTTTTTCAGCAAGAAATGGTGCGACGTATAACTGGTGATAGCGATATAGACTTAACGTTACCAGGTAAGGGAAAGTGTGCTTACTTCATCATCACTCCAGATACCCATGGCGCCTTTGATTTTCTGGCTTCATTGCTGTTCACCTTTTTATTCGTTCGGTTGGTAGAGGTTGCTGATACCTCTCCCAATGGCCGTTTACCGGTGCAGGTTAGTTTTCTTCTGGATGAGTTCGCCAATATCGTAAGTATTCCGGAGTTTGAAAAGAAAATCGCCACCGTCCAGAGCCTAAGACTGAAGACGAACTTAACGATGGCGGAAATCAGGATTACCATGATACTAAGGACCAGAAACCTCTAGAAGAAGGGGCAGAAGAGGTGACGGAAGAAAATATAAAAGAGGGAGATAGGGTTATAGAGATAGAAAACAAAAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGACCATCGACCATAGAGGAATTTGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //