Array 1 601611-602495 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP022464.2 Enterocloster bolteae strain ATCC BAA-613 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 601611 33 100.0 35 ................................. ACTATCTGTCCAATCAAGCAGACACCGGTCATCCA 601679 33 100.0 33 ................................. CCCTCATAGCTCCCATTGAATAAGGGTCACATT 601745 33 100.0 34 ................................. CTTGAAATGCTCCAGCGCACGTCCTGCCAGGTCA 601812 33 100.0 36 ................................. CTTTTTAGGGAAAGTGAGAGGCAAAGGCGCTATATA 601881 33 100.0 35 ................................. AACAAAACTTGCACTGCAGGCAATGGTGGACCGTG 601949 33 100.0 34 ................................. AGCGCAGAGGCCGGAAAATCGTGAATGTGGAGTC 602016 33 100.0 35 ................................. TTCCAATATCTCATTACTTGCTGCCTCGGCCCCCG 602084 33 100.0 34 ................................. CCTATATTATCTGATGTATCAGGGGATAACAGTA 602151 33 100.0 33 ................................. TTACCGGATGTCTGGATTCTGGTAAACCGGTAT 602217 33 100.0 34 ................................. GTCAATGCCGGAACCAATAGGAACCCCGTCACCT 602284 33 100.0 35 ................................. CGTCACATCGTACGTCTGGCAGAATGCGCCTACCA 602352 33 100.0 36 ................................. CCGTGGAGGGCGGCCGTATAAGTCTGAGCCCAGTCA 602421 33 84.8 9 .........................C..TTCC. TTCCGGTCA Deletion [602463] 602463 32 75.8 0 ............A.-A...A..CAA.C...... | G [602493] ========== ====== ====== ====== ================================= ==================================== ================== 14 33 97.2 33 GTCTCCGTCCTCGCGGGCGGAGTGGGTTGAAAT # Left flank : TGCTGATACTGATTACATATGATGTGAATACGGAAACCACTGCAGGCAGGACCAGGCTGAGAAAGGTTGCAAAGCAATGCGTTAATTACGGCACCCGCGTCCAGAATTCTGTATTTGAATGTATTTTGGATAATACCCAGATGATAAAGCTAAAAGCCATACTGACAGATATCATTGATGAGCAGACTGACAGCCTTAGATTTTACAACCTGGGAAATAAACACACTACAAAGGTGGACCATGTTGGGGTGAGTAAAGGGATTAAAGTGGAAGAGCCGCTGATATTCTGACCTGGCTGCGGGCGGTAAGGAGGTTTCAAATAGTTTGGTGCGAACCAGAAGCAAACATGAATTTACGGGGGGATTCGCACCGGAAAAACTGCACAGTGAGAACGGTTTTGGATGTGTGCAGGGCAGGTTGGCGGTGATTTGAGGGAGTATGATGTGATTTGATTGTGGAAATGTGATGAAGAATTGTTGGTTTTTTTGTGTAGTATTGCT # Right flank : TCCGCCAAATTCAGGATTACGTTTAGTCAAAACATCATTCCCCTTTTTCTAAGAAAACAGTATAGTTTGAATCATAAACATTAGCTATAACTAACAACACGCAACAAGAAAGGTGGGCGAACACCCACCTTTGCCATAAAACTGTTATAGGGTATAAAGAACGCGGGCCTCCCTCACCCTTTCCATGCCCGAATCTCTCTAAGCCCCGGCACCAGCACTTTGGCGCTGGTTTCCAGAATAATCCGTCCTTTTTCAGCCGTGGCGCCTGACGGGTCTCCGCCGATTCCTATGGGTTTGCCGTCTGCTGTTTTCCAGTCCTCGGACACCCAGCCAATGGATACGTTTCCATAAGGCCTCAGTGCCTGATTGTCTTTAAATGCAATTGGAATTCCTGCCTCTGAGGTATCTAACTTTACCAGGGACGGGTCCACGGCCATGACCATGGAGGTTTCCATCTCGCCTCCATGGAAGTCCCAGATATTTCCCTCTGAAATGGTGGC # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:-0.15, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGTCCTCGCGGGCGGAGTGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTCCGTCCTCGCGGGCGGAGTGGGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.90,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 4785391-4783951 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP022464.2 Enterocloster bolteae strain ATCC BAA-613 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 4785390 33 100.0 35 ................................. ATAAAGCTGTGCCTGGGCGTTCTTTTCGGCCTCTG 4785322 33 100.0 33 ................................. CTATATCCCTGCTTTATTTTGGGCGGCTCCGTC 4785256 33 100.0 33 ................................. TCCCCGAACCGGATTACCTGGCTGTTAATCCCG 4785190 33 100.0 35 ................................. ACTAAAGGAAATATGTTTAAGGTTGGGTACCATAT 4785122 33 100.0 33 ................................. AAATACTCCACTGTGCGGTCCACATCCACGGAA 4785056 33 100.0 32 ................................. TCAGTCCGGCACCCGGTTCATATGGCTGCAAA 4784991 33 100.0 34 ................................. TCCGTTATTAGGTTATTTGTAGGTGTGTAACCGT 4784924 33 100.0 33 ................................. ATTTGTAAGATAATCAACCAAATTTTGCGCAGA 4784858 33 100.0 35 ................................. ACCGATAGCAGAGCCAGCCACATCAATATGTATAC 4784790 33 100.0 33 ................................. AACGGTCTGTGTGCCAGCAGTTACAAAATCTGC 4784724 33 100.0 33 ................................. ATCAGATGCTGCTTATCATTTTAAATCCATCAA 4784658 33 100.0 36 ................................. GTCAATGTAATTTATCAATCCTGCTTCCCGCATATC 4784589 33 100.0 33 ................................. CATGTTGATTATCAGATTATGAATCAACTGTAT 4784523 33 100.0 35 ................................. GCCTATAGCAGAGCCAGCCACGTCCACATGAATAC 4784455 33 100.0 33 ................................. ACGAAAACCACAATCATCACAACCGTGAATATA 4784389 33 100.0 33 ................................. GTAAGGCCCGTGCTCTATGAGAAAATCAAAGAG 4784323 33 100.0 35 ................................. ACCTTCCACCTGCGCATCCTTAAAAGCTGAATGCA 4784255 33 100.0 36 ................................. GTAATGTCCTCCCCTAAAAGGGGTAACTGAATCAGC 4784186 33 100.0 36 ................................. AACATAAGCATTTACGGCTGCGAGTATGTCTGCCCC 4784117 33 100.0 34 ................................. CTATATGTCACGTTATCTCACCTCCGCTCATAGT 4784050 33 100.0 34 ................................. GATATATAGTATAACAGACTAAAATGTATAAATC 4783983 33 81.8 0 ......................CA..CCA...G | ========== ====== ====== ====== ================================= ==================================== ================== 22 33 99.2 34 GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT # Left flank : AAGTTCTGGAACTACCTGAAAAATGTGGATTTCTGGCAGTGGCCGGAACAGCGGTGGCCCTGAAGGCGGGAAAGCTGGCTGCTGTAATGGAACGTCAGGGCAGAGTACTGCGTATTTGCGATGCCGAAGATATGAAGGAAGTGATGGCGGAATTTGTCCGTGCGTTCAAGCAGGGAGCCATATATCCGGAACAAAAGAGGCTTGTATTGAAAGAGTATCCGGCGGAGGCGGCAGAGGCTTTGCAGCATGCAGGATATATGCGGGAAATGAAGGATTATGTAATATATAAGTAGAGTTGGTTTCTGTGAGTTGGGAGCCCTTCAAACCAGGTGCGAATGCCAAGCTGACATGAAATGCCAGGGAGATTCGCACCTGAAAAACAGAGGAAAAGGCCGTGAAAGCGGGCTGGGTGAATGGACTGAATTGGTTGAACTGGGGAGAGAAGAGCATAATGCATAAAATGTTAGGGGGGATGTGGAGTAGGTTTGGATAATTTTGCT # Right flank : ATACCTGTAAGCCCCTAAATTAATGCAAAAGGAAAATTGCTCCCCGCGTACCTAATGCATTGAAAGCAGCCATAATTATATATTGAGAATTCGCAAAACATCAGTTAAAAGAACATATTAACAGTATCCCGATCAACAGGGAATCCGTTAAGCGCATACCCCCCTCCGTAAAAAACATCCGCCCCAAAAAACACCAACATAAACAAAGGAGTAACACATATATGATTGAAATAATCTATAGAGACAAACGCTTTCTTGTTAAGGGCAGCTTTTCCATAGGAATAGCAGGAAACTATGTAAATGAGGATTTTGGGGATGAGAATATCATGATTAACGATACGTTAGAGGAAATCATGAAAGAATTGCAGGATGAGGACTCCTTTTGGTACAAGCCGCTGTTTCCCTATCTTAAATCTGAGACAGCAGACAGTGGCGGAATAGCCAGAGGTCTTACTGCGTACTACAATCAAAAGGAAAAGGAAATCAGGGAGAATGAAAAG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.00,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //