Array 1 467283-467881 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR732831.1 Bacillus sp. 348 isolate Bacillus sp. 348, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ========================================================================= ================== 467283 32 100.0 34 ................................ TTGTTCGTTACTTTGCGTTACTGTAACGTTACAT 467349 32 100.0 34 ................................ CACATATTCGGATTGTCCTTCTCCATCAGAACGG 467415 32 100.0 35 ................................ AAGTTGTTGACCTCCGTCACCTCTGACATCAGTAA 467482 32 96.9 34 ...........T.................... CGCTGGTTGCTGCATACATAATAATCCGCACGCG 467548 32 100.0 33 ................................ TTTTTGATCTGTTCTTTCTACATCTTCTCCATC 467613 32 100.0 73 ................................ CACAGCCATTTCATGGGGTTTTGATTGCGTGGATTGAAATTGTTTATCCGTGTATGCTTGTTGTTGCTTTTTA 467718 32 100.0 35 ................................ AACGCTGAGGATGCACCAGAAGGAAAGAAAGACGC 467785 32 96.9 33 ...................T............ ACAGTAGCCGTATTAATTACAGGTCTTATATTT 467850 32 81.2 0 ...........T....A..T.A...A.A.... | ========== ====== ====== ====== ================================ ========================================================================= ================== 9 32 97.2 39 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : ATGAAAGAAATAGCCGACCGGCTGGGCGAATCAAGACAAAACATCTCAAACATCCACAAAAAAGCGCTCAACAAACTAAAAGAAGAAACAGGGGGAGATGTCCGTGCAAGAAGACAAAATGACCAATGGAGAAATGGAAGAACTCATTGAAACCTTCACACCCATGATCAAAAAGAAACTACAAAACACGGCATATCAAGAAAGAGAAGACCTCGAACAAGAACTCTACATCAAACTCATCGAAAAAATAGACCGGCTGATTTACCAAGAAGGACCTGGCTTTTGGGAGTTTATTGTGGAATATATGACGAAGATGTAAGAGGAACTGATGGTGCGAATGTCAGGTGAACATCAAATCCCCGGGACATTCGCACCTTTTTATTCGACAAAATTGAGAAAAAATGTATATTTTATAAAGGGGAAAACAAAATTCTTTATTGAAAGTTGTGGATTGTGCCTATCATTTCCTAAAAAATGTTACAATTAGGGCAGAAATCGCA # Right flank : TTCTTGTCAGTAGGTAGCTTGAAAGATTTATTGACATTGCGCTTGAAATAGGTGTGAAAAACATAACTCTGTCTCAGCCATTTTATTAATGAATTCAAAGATGTTGATGAAGCAGCGAAATAAGTATGATTATCATCAGTAATAGTTTTTAATTAAATAGGATTAAGAGAGATTCGGTGCGAATGTGAGGTGAACATAAAATTCCTGAGGCATTCGCACCTTTTTATTCGACAAAAATGAGAAAAAATGTATATTATTTAGAGGTGAAAACAAAATTCCAAATAGAAATTGAGGGTTTTGGCTATCATTCCCTAAAAAATGTTATAATTAGGGCAGAAATCGCAGTCGCACTCTACATGAGTGCGTGAATTGAAATTAACCCATTATCCGTAATCATCCTATAAACACCATGTCGCACTCTACATGAGTGCGTGGATTGAAATCGCTCTCCAATCGACCGTTTTTGCACCTGCATAGGTCGCACTCTACATGAGTGCGTG # Questionable array : NO Score: 8.76 # Score Detail : 1:0, 2:3, 3:3, 4:0.86, 5:0, 6:0.25, 7:-0.35, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 468225-468458 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR732831.1 Bacillus sp. 348 isolate Bacillus sp. 348, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 468225 32 96.9 35 .......................A........ TAACCCATTATCCGTAATCATCCTATAAACACCAT 468292 32 100.0 34 ................................ CGCTCTCCAATCGACCGTTTTTGCACCTGCATAG 468358 32 100.0 33 ................................ GATTTCTTCGTCTGTTAAATCTTCATAGTATTT 468423 32 84.4 0 .......C...T............T..TC... | A,G,CA [468432,468440,468446] ========== ====== ====== ====== ================================ =================================== ================== 4 32 95.3 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : TCTACATGAGTGCGTGGATTGAAATAACGCTGAGGATGCACCAGAAGGAAAGAAAGACGCGTCGCACTCTACATGAGTGTGTGGATTGAAATACAGTAGCCGTATTAATTACAGGTCTTATATTTGTCGCACTCTATATGAATGTGAGGAATAAAATTCTTGTCAGTAGGTAGCTTGAAAGATTTATTGACATTGCGCTTGAAATAGGTGTGAAAAACATAACTCTGTCTCAGCCATTTTATTAATGAATTCAAAGATGTTGATGAAGCAGCGAAATAAGTATGATTATCATCAGTAATAGTTTTTAATTAAATAGGATTAAGAGAGATTCGGTGCGAATGTGAGGTGAACATAAAATTCCTGAGGCATTCGCACCTTTTTATTCGACAAAAATGAGAAAAAATGTATATTATTTAGAGGTGAAAACAAAATTCCAAATAGAAATTGAGGGTTTTGGCTATCATTCCCTAAAAAATGTTATAATTAGGGCAGAAATCGCA # Right flank : TGATTGTGTCTTAAACGGTTATGACTACCTTAAAGATCATCTTCTTACAACATCCTCTTTCAAATAGCCATCGAATATACTGTTCATTTGTACAGTGAAAACATGACTCCTTGCAGTCATGTTTTTTTCTTCTTCTTTTTCCTAAATAAACCTTAAAAAATCTCAAAATAAGTCGAAATGAAAAGTAGTCATTTAGATTCAAATTTTATCCATTCGTAATGTGGTGAAGGAGGAATTGGTTTGGGTGAAACGGAGCGAACCGGTAAAGTTGAGCAGCTGATCTTAGAGAATTATCAAAGATTAAACAGCATGATATCCGAAGAAGTCGACTTTGCTTCTAATCATGGTGGGCTGACAGGGGATTCTAGAGAAGTGATGTGGATGGAGTTTTTTCGGAAAATCATTCCTAAAAAATATTCATTAGCACAAGGTGTCATCATTATTGACTCAGAAGGAAATCATTCTAACGAAGTCGATATTGCCGTATTTGATGAACAGTA # Questionable array : NO Score: 8.62 # Score Detail : 1:0, 2:3, 3:3, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 476063-476228 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR732831.1 Bacillus sp. 348 isolate Bacillus sp. 348, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 476063 32 93.8 36 ......T........................C AATTCAAGGATTTTCTTTTCATGAGTGGTTAATTTC 476131 32 100.0 34 ................................ CATTTTGCATCCACAGTACGCGTAAAGAATTTTT 476197 32 90.6 0 ...................GA......A.... | ========== ====== ====== ====== ================================ ==================================== ================== 3 32 94.8 36 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : GCCTGAGACGGTAGGAGAAGCATTCAAAGTGGATGTGATGACACCACATCATTCAGACTACAACAGCGTCAAGCTAGATAAGATGAACAAAGGGGGAAGTGTTCCAGCCCCTCGAGACGATGACTCACCAACACCGATTCATTTCTTAACGGTGGTCAACGGCCGCTTTCAACTTCTATTGAAAACAAAAAAGAATCTACCAGAAGAAGCAGAATGGCTCGAACTCGCCAAAACCATCTTACTAGGCGCTTTAGAACACGAAGGAATCGGTGCTAAAACAAATGCAGGTTATGGAAGACTTAAAATGGACGACGTCATTTCATAAGACTAAGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCGTTTCATTCGACGAAAATGAGAAAAAATGTATATCTTTTAGGGGTGAAAACTTAATTCCTATATAGAAACTTAAGGGTTTTGACGATCATCCCATAAAAAATGTTATATTAGGGCGGAAATCGGA # Right flank : TTGCGAAAACATAACTCTGCCTCCTGCTTCAGTAGTCATGAATCTAATTGAATTCAATTGTTGCTGAAATATAAAGAAGTATGATTAACAAGTTTCAATAGATTTCATACTAAGAAAAAGTCGGTGCGAATGTGAGGTGAACAAAAAATCCCTGAAACATTCGCACCGTTTCATTCAATAAAATGAGAAAAAATGTATATTTTTTAGGTGTGAAAACAAATTTCTATATAGAAACTTGAGGGTTTTGACGATCATTCCCTAAAAAATGTTATAATTAGGGCGGAAATCGCAGTCGCACTCTACATGAGTGCGTGGATTGAAATTCTTCAGCATAATTTTCTAGCACCACCAATTTCGTCGCACTCTTCATGAATGGGTGGATTAATAATTGCGAAAACATAACTCTGCCTCCTGACTCAGTAGTCAAGTATCTAATTGAATTCAATTGTTGAAATATAAATAAGTATGATTAACAACTTTAAATAGATTTCATACTAAGA # Questionable array : NO Score: 6.91 # Score Detail : 1:0, 2:3, 3:3, 4:0.74, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.61%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 476906-477135 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR732831.1 Bacillus sp. 348 isolate Bacillus sp. 348, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 476906 32 100.0 35 ................................ ACTTCAAGCGATGAAAGGAAGCCAAACTTCAGCAT 476973 32 100.0 35 ................................ TTAAACACTTTCATCCATTCGTAAAACATTTCAGG 477040 32 96.9 33 ........................A....... CGACGTTAACGGCTTTTTGCCCTTTACAGCATA 477105 31 81.2 0 ...........T...G........A..-.T.G | ========== ====== ====== ====== ================================ =================================== ================== 4 32 94.5 35 GTCGCACTCTACATGAGTGCGTGGGTTGAAAT # Left flank : TAAAATGAGAAAAAATGTATATTTTTTAGGTGTGAAAACAAATTTCTATATAGAAACTTGAGGGTTTTGACGATCATTCCCTAAAAAATGTTATAATTAGGGCGGAAATCGCAGTCGCACTCTACATGAGTGCGTGGATTGAAATTCTTCAGCATAATTTTCTAGCACCACCAATTTCGTCGCACTCTTCATGAATGGGTGGATTAATAATTGCGAAAACATAACTCTGCCTCCTGACTCAGTAGTCAAGTATCTAATTGAATTCAATTGTTGAAATATAAATAAGTATGATTAACAACTTTAAATAGATTTCATACTAAGAAAAAGTCGGTGCGAATGTGAGGTGAACATAAAATCCCCGGGACATTCGCACCGTTTCATACGACAAAAATGAGAAAAGATGTATATTTTTTAGGGGTGAAAACTTAATTCCTATATAGAAACTCAAGGGTTTTGACGATCATTCCCTAAAAAATGTTATAATTAGGGCGAAAATCGCA # Right flank : GTATGAGGAATAAAATTCTTATCAGAAGGTAGCTTGAAAGATATATTGACAATTGCGCTTGATATAGGTGTGAAAAACATAACTCTGTCTCACCCATTTTATTAATGAATTCAAAGCTGTTGATGAAACAGCGAAATAAGTATGATTATCATCAATAATAGTTTTTAATTAAATAGGATTAAGAAAGATTCGGTGCGAATGTGAGGTGAACATAAAATCCCTGGGGCATTCGCACCTTTTTATTCGACAAAATTGAGAAAAAATGTATATTATTTAGAGGGGAAAATAAAATTCTATATAGAAACTTGAGGGTTTTGACGATTATTCCCTAAAAAATGTTATAATTAGGGCAGAAATCGCAGTCGCACTCTATATGAGTGCGTGGATTGAAATAGTTACGTGAATATAAAGATGGAAATTATACAGGTCGCACTCTATATGAGTGCGTGGATTGAAATGTTCACAAACTTAGTGAGTACGCTGTCTTTTGGGTCGCACTC # Questionable array : NO Score: 5.58 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 5 477496-477723 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR732831.1 Bacillus sp. 348 isolate Bacillus sp. 348, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 477496 32 100.0 33 ................................ AGTTACGTGAATATAAAGATGGAAATTATACAG 477561 32 100.0 33 ................................ GTTCACAAACTTAGTGAGTACGCTGTCTTTTGG 477626 32 100.0 34 ................................ ATCTTTACACCAATTGCTTTTAAAGAATCTTTAT 477692 32 78.1 0 ...........C........A.A...CAC.G. | ========== ====== ====== ====== ================================ ================================== ================== 4 32 94.5 34 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : GGTTGAAATTTAAACACTTTCATCCATTCGTAAAACATTTCAGGGTCGCACTCTACATGAGTGCGTGGATTGAAATCGACGTTAACGGCTTTTTGCCCTTTACAGCATAGTCGCACTCTATATGGGTGCGTGGATTATAGTATGAGGAATAAAATTCTTATCAGAAGGTAGCTTGAAAGATATATTGACAATTGCGCTTGATATAGGTGTGAAAAACATAACTCTGTCTCACCCATTTTATTAATGAATTCAAAGCTGTTGATGAAACAGCGAAATAAGTATGATTATCATCAATAATAGTTTTTAATTAAATAGGATTAAGAAAGATTCGGTGCGAATGTGAGGTGAACATAAAATCCCTGGGGCATTCGCACCTTTTTATTCGACAAAATTGAGAAAAAATGTATATTATTTAGAGGGGAAAATAAAATTCTATATAGAAACTTGAGGGTTTTGACGATTATTCCCTAAAAAATGTTATAATTAGGGCAGAAATCGCA # Right flank : TGTCTTTGTTTTATACAAATTCAACTACCTATCCAGTTCAAAATCTACACAAAATGAATAATCAATAATGTACTTCCCCCCCTAAATCCAAGCCCTACACAACAAAAAAAGACTCGCTCACACAGAGCCGAGTCTTAATTTTTTTTGCAGTTTTTCTTCACTGAAAATCCAGCCGGTATAGGAATTTTTGATTTGGTGGTCCATGTCGATATGGCAGATTGCAACAAAAGGATAGTGACCTTTGCTGCGGTAGCGCAAATCAATAAACCGTACCTCATAATGATCCTTGTATTTATCTACTTCCCACCGGTAGACAGGGGAGAAGGAGAGAAAGGCTGAAATGTTTTCATCCTGTTTGGCAATTTTCATAATCTCAGTATCAGGGACCGGCACACGGTTAAAGGTGTCTAAAATGATGATCTCACCATTCATACTGCGTCCAACATGGAAAGAGGATTTACATTTCACAGCAATACGCCATTGTCTAAACTTCATTGTAG # Questionable array : NO Score: 8.58 # Score Detail : 1:0, 2:3, 3:3, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //