Array 1 22124-21064 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LKFS01000067.1 Lacticaseibacillus paracasei strain FAM18157 FAM18157_scaffold_0067, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     22123	    36	 100.0	    30	....................................	TCAGCCGGCCGAGTGAATCTGGCAACACCA	
     22057	    36	 100.0	    30	....................................	TGCATCAGCATTTCACGACACATCGAACCG	
     21991	    36	 100.0	    30	....................................	CCGTCATATGATGGTATTGTGCCAAAGGTG	
     21925	    36	 100.0	    30	....................................	GCCAGCGCTTAGCGGGCATTGAGCGCGCAA	
     21859	    36	 100.0	    30	....................................	ACGCAAGCGTGAATATGCTGACGACTCTCC	
     21793	    36	 100.0	    30	....................................	CATCATCTAACGACGAATTAACTAACAAGT	
     21727	    36	  97.2	    29	.........................G..........	CACATCAAACACGACACTTTACCACTCGC 	
     21662	    36	 100.0	    30	....................................	AGAGCCATGAGACAAGTCACGTTTATTCAA	
     21596	    36	 100.0	    30	....................................	GCTTACAACACAGCGGAGAAGTTTACACGC	
     21530	    36	 100.0	    30	....................................	TCGCGATGTGGTTGGGGAACCTGGCTTCCT	
     21464	    36	 100.0	    30	....................................	CCGCCGAACGTTCACGCCCACATCACTCAA	
     21398	    36	 100.0	    30	....................................	AGAATTGCAAGAAATGGGATTAATGCAATA	
     21332	    36	 100.0	    30	....................................	ACGAGAAGAAGGAGCGGGAGGACAATGGCA	
     21266	    36	  97.2	    30	............C.......................	ATACATACATGCCATGACGATGCTCATTTT	
     21200	    36	  97.2	     0	.........G..........................	-                             	Deletion [21165]
     21164	    35	  75.0	    30	-CAAA.....AT....A.G.................	AGGAAATTCGAGTTCTTCCCGCAATTGATG	
     21099	    36	  83.3	     0	C......................C.....A..TTC.	|                             	
==========	======	======	======	====================================	==============================	==================
        17	    36	  97.1	    28	GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	                              	       

# Left flank :   AGCTTGATCTAGATAAACTTTTTCAACGTCTAATCTATAAGAAGATGGGGTTGTTGATTGAGAATCAGCGGCTTGTCGAACTGATCGATCAATCGCAACAAATGGCGATTGATTTACTCCAAGATCCATTCTTGAGCGACTTGCCAGTCACGGTTGAACCAGGCGGTAAGCTCGAACAAATCATGAAATACTGCAACGTTCATTTCGATGAGGCTGTCACGACAGAGTCAACCTCGAAGATTGAGGCGCTTATTCAAACGTTAACTAAACTAGGGGAAAAGAAACTTGTCATTCTTACAAATGTCAGTCATTATTTAAGTGCTAGAGATTTCTTTGCGGTGACTGAACAGATCGGTGATACAGAACTTCAGGTCATTCTCATCGAGTTCTCAAAAGTGAACCGAAAGAAGTACTTTGAGAAATGCCAGTATATCTATATTGACGAGGACTTCGTTGATAGTCGCGAACTAGATTGATTAGGAGATTGTGTGAAAACACCG
# Right flank :  AAACAGCAGTGATATTAATATTGAAGCTAAACTTGTCAAAAAGTGCCTCATTTTGTGACAAAATAAGATGTTTCACTATTTATTGTGTGAAACAAGCCTCAATATTTACAAAGCTGAACCTTTCAACGTTCAGCTTAAAAGCCGCCGTCTAAAGCAATATCGTAGTAACCACATACACTCATGCGGTGATATATCAATCAAAAACTAAGTGCTATCGACCTCCTCTTGTGATAGAATTCATTATATATGAAATCGTTTACACAACGAGGAGGAAGAACGACATGAAAAAACTAATAGTGCTCAGTGCCACACTTTTGGTCAGCATGGGGTTGGCCGCATGTAGTAGTGGATCGAGCTCTAGTTCGAGCAAGAGCAGCAGTAGTACGACCAGTCAGACGAGTAACGCTAAGGTGAAGATCAATACCGGCGCTGATGCGAGTGCCAAGGTGCCGGCAGCCGGTACCTTAGTGATGCGTCAGCTTTATGCTGCACCGCACGGC

# Questionable array : NO	 Score: 5.93
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.17, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 95% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-2.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [17-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [68.3-55.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,5.28   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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