Array 1 58463-53939 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOLR01000012.1 Lacticaseibacillus mingshuiensis strain 61-2 contig12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 58462 36 100.0 30 .................................... CCAGTCCGCTGACATTGCGAGTTTAACTTC 58396 36 100.0 30 .................................... AAACCCAGTCAATCAGTGAGACGAGACTAG 58330 36 100.0 30 .................................... ACGAAACGTGGGCATCCTCAGCAGATTCAG 58264 36 100.0 30 .................................... CCACCGCCGGAAAAACCACCCGAGGCGAGA 58198 36 100.0 30 .................................... CATGAACAGATTGACAAGCTGTGGGCGGCT 58132 36 100.0 30 .................................... CTGACGGCTCCGTCCCAATTGCGTACTCGT 58066 36 100.0 30 .................................... TCATGTAACACGGGGGTAGATAATACAACG 58000 36 100.0 30 .................................... AGAAAATGGAACGCAAGTCTAGAGTAAAAA 57934 36 100.0 30 .................................... AAAACGCAATTTGAAAGGAGCGTTCGGCTT 57868 36 100.0 30 .................................... AGCCGCCCACAGCTTGTCAATCTGCTCATG 57802 36 100.0 30 .................................... ACCAAGCTGCGAGATCAAGCAGATATGATT 57736 36 100.0 30 .................................... CACTAACGATGGCATTAAGTTTATGAACAA 57670 36 100.0 30 .................................... ATCAGTCTGAACAAAATTTCGGCGCCACAG 57604 36 100.0 30 .................................... AACACCCCAGAGGCACCAGAAGGCAAGGAA 57538 36 100.0 30 .................................... CTCAGAGATTGAAACAGGCAGAGCTAAGTT 57472 36 100.0 30 .................................... TACTTCTCACGCTTGCTACCCAACCCTGAA 57406 36 100.0 30 .................................... AAAAAAGTTGGCCGAAAACTGTACTTCTCA 57340 36 100.0 30 .................................... TTAGGTGGTGTTAATTGTGTCGATTGAAGT 57274 36 100.0 30 .................................... GTCTTGAGCCAAAGAGGCCAAAGAAACGAA 57208 36 100.0 30 .................................... CACATTTCCGTTCTGCTCGTGATTTACAGT 57142 36 100.0 30 .................................... ACAATGAGAGAAGCAGCAGCACAAAGGGCA 57076 36 100.0 30 .................................... ATCAAAGCACTGTTCACGAAGAGGCTTAGT 57010 36 100.0 30 .................................... GTGCATTATGCTGACTGCTAATTTGGATAA 56944 36 100.0 30 .................................... GAATTCAAGACGCTGAACCATTGAGATGGT 56878 36 100.0 30 .................................... GAGATAAAAGATTGTTTTTAACAAAAACAG 56812 36 100.0 30 .................................... CAACAGGCGAGTACAACAAGCCTTTCGTTA 56746 36 100.0 30 .................................... GCTTTTAAGGACACAGTTGTTGGAATCGCG 56680 36 100.0 30 .................................... AGCATAGTACAAGGTTTGAAGCATCTCATT 56614 36 100.0 30 .................................... CGAACAAGACCCAACTTGACCAGCAGCGAG 56548 36 100.0 30 .................................... ATTAGCCAGCCTTGTGAAGAAGACGCTTCA 56482 36 100.0 30 .................................... ATTAGCCAGCCTTGTGAAGAAGACGCTTCA 56416 36 100.0 30 .................................... AAAACGTTTGACACGGTACGCCGGCGGCAG 56350 36 100.0 30 .................................... CTTCTGCCTGAAAGAAAGATTGTTCTTAAA 56284 36 100.0 30 .................................... CAGATTGATCGCCTTTGGGCCGCCGATTCG 56218 36 100.0 30 .................................... AACATAGTGAACAGGGACGATGACCGTTGT 56152 36 100.0 30 .................................... CCTTCGCAGCTTGAATTTTGTAATTTTCTT 56086 36 100.0 30 .................................... GCACTGACTAAGCTTTCTTCTCAATTTTAT 56020 36 100.0 30 .................................... GCACTGACTAAGCTTTTTTCTCAATTTCAT 55954 36 100.0 30 .................................... CACTGACTAAGCTTTTCTTCTCAATTTCAT 55888 36 100.0 30 .................................... ATGAATTCGATGAAAATATCGTGAATATAT 55822 36 100.0 30 .................................... CGTGAACAGTGCTTTGATGTGATTGAGTGC 55756 36 100.0 30 .................................... CTGATTTTTTTTTGTCCGAAATTCAAGAGC 55690 36 100.0 30 .................................... AGGCAACTGGACAGTCTATAACTGCCATTC 55624 36 100.0 30 .................................... CCACCACCGCCACTATAATCAGATGCAAAT 55558 36 100.0 30 .................................... AACAAAAACGGCAAACCGCCATAGAACGAA 55492 36 100.0 30 .................................... TTTGATGGCTTCTTTCAAGGTTTTGTTGTT 55426 36 100.0 30 .................................... GGACGTTTCAACGCGCTTTCGATGCCTTTG 55360 36 100.0 30 .................................... TCTGGTGTCAATAAAATATTTACATCAATA 55294 36 100.0 30 .................................... GGGATTAGAGGTGGATACGAGCGGTTGCCC 55228 36 100.0 30 .................................... ACGTTTTCGGGGACAGTTTCCCCTTATGCT 55162 36 100.0 30 .................................... TATATTCCTTGATATACTCTAGGGTATCAA 55096 36 100.0 30 .................................... TGTACGCTTTTTTATGGCACTCCGTCGGGT 55030 36 100.0 30 .................................... TGCGTTACCGTCATCATCTGTTTCAGAGGT 54964 36 100.0 30 .................................... CACCCCCTATAGCTAGTATAGTAACAGGAC 54898 36 100.0 30 .................................... AAAAGGACGGCGATGAATACCGGATTGAAC 54832 36 100.0 30 .................................... CTGATCGTGCAGGAGGTGGGGCAATGACGT 54766 36 100.0 30 .................................... GTAATCAACTGGATCAATCGCAAGGCATAT 54700 36 100.0 30 .................................... CCTGTTATTTCATCCTGGGCGCCTACAATA 54634 36 100.0 30 .................................... TCACCGAAGCGGCTGACGGCATGAGCACGC 54568 36 100.0 30 .................................... TACAACGTCTATCTCGGCACTGGCGGGGTA 54502 36 100.0 30 .................................... CATCGACACCAGGCAATGGCGCGGTGACAG 54436 36 100.0 30 .................................... CCGCGCCATTCTTGCCGCCGTACCGCGTCA 54370 36 100.0 30 .................................... CGATGCATGGACTTCGACACAGCCACGTCT 54304 36 100.0 30 .................................... TTTATCGATTGCTGCATATAGTTCTCGAGT 54238 36 100.0 30 .................................... CGCTTGTGCCACCGGTGAATGAGGCGGTCG 54172 36 100.0 30 .................................... CGTTGCGAGAGTACTCGGAGCGGATGGAAG 54106 36 97.2 30 ..................................G. CGTTGATGACGAGCTCGTCGATCGAGTAGA 54040 36 77.8 30 .T........A..C.......C......C...AT.T ATGATCAGACTATGTATTTACTACCCCCGT 53974 36 91.7 0 A..........................T......T. | ========== ====== ====== ====== ==================================== ============================== ================== 69 36 99.5 30 GCCTTAGATAGATGTCAGTTCAATCAGGGTCAGCAC # Left flank : AGGTGGATCTAGACAAACTCTTTCAACGGCTGATTATCAAACAACTTCTTGCTGTTATCTCAGATGAATCAACAGTCAAGTTGATCGATGAGGCAAAGGAAATGCTTCGTCTCGTACTTGAAAGCTCATTCAATTTAGACATTCCGCTCGACGTCTCGCTGACACCGACATTGGAGAATATTGTTAAATTTTCAGGATTAAGTTTCAGCCCCGAAACAAAAGCAGACCCATATGCTACACTTGAGATACTTCTAAGGACACTTGTTGAACTGGAAAATGTCAAAATTCCGGTTCTAACAAACCTGAGCCACTATCTTGATGTCAACCAGTTGAATCAACTAGCAGGATTAGTGGCAGGAACTGGCATGGCCGTTCTTGACATTGAATTTTCATCTATCTCTCGACATAGCTTATTCGAAGAATGCCAGTATATCTGGATTGATTCGGAGTTTAACGATTCTCGAGGAGAACGAGAATGAGATTTTCATGTCAGAACATCG # Right flank : CATAGGCGAGGACAACTCAAGATGCGGCGTACTTCAGCAAGCATTCAATGCAACAGGGGAGAAATTCAACCTTGCTCATGATTGCTCTTTTTTAAATGTCATATTTGGGTGGGTGCGCTTTTACATCGCAGTGATCAGTCCCCATGTTATAATTGTAGTTGTTGGGATAGCTCCTTTCGCAAACGCGAAGGCTGGTTAAAAGGGGTGATACGAAGTGTGGCTTGTAATCAAACTTGCATTCTATCTCTACATGATCTTGCTCACTCTATAGAAAATGGTGGTCGCCTCTAGGGGCGGCTATTTTAGTATTTGACTTAAGCACTCAGGGTGTCAGCACAGACCATTCTTGTCTGAAAAATCAACATAGATCGATTGACATGCGCTACACTGTTCATAAATGGTGTCACCAAGGGGCTCAACAAATAGAGTTGAGCATCAAAATAGTCGTTTATCCCTATTAAAAGGAGAACTGCACAGTCAATGACAAAACACTTTGAGCT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTTAGATAGATGTCAGTTCAATCAGGGTCAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //