Array 1 56569-55601 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNPK010000011.1 Bacteroides faecis strain D59t2_181005_E8 NODE_11_length_165540_cov_21.8001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 56568 47 100.0 30 ............................................... TTGAGCTTAGATTGAAAGAAGCCGAAATAA 56491 47 100.0 30 ............................................... TCCTGTTTTATTAAAAGCATCCCTATTCTC 56414 47 100.0 29 ............................................... CTTGCAAGTTTACCCCGAAGCTCATCAAC 56338 47 100.0 30 ............................................... CAAGTCCAACTCGATAAGTTACTTTGATTG 56261 47 100.0 29 ............................................... AAATAGCCAAAGCTACATACGAAAAGGTG 56185 47 100.0 30 ............................................... AATGCATTCAAGAAGAAGACGCAAAAGACA 56108 47 100.0 30 ............................................... GGCATTTTGTTAGAAATATATGTAACAGGC 56031 47 100.0 30 ............................................... CTCTGGCTGATAATGGTCAAGAAGACCTCT 55954 47 100.0 29 ............................................... CATAAGCTTCATCAAAAGTGTAAGGTAAC 55878 47 100.0 30 ............................................... CATTAAGGATCTGATAGTCATCAATAGTTT 55801 47 100.0 30 ............................................... TAAATAAAAAGTATTATATTTGCAACAAAT 55724 47 100.0 30 ............................................... TCGTCCTCGAAGAGACTGCGTGAACGCAGA 55647 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 13 47 100.0 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGC # Left flank : AAACGATTTCTTTATTTAAGTAAAATATACGACGGTTATATTGCCGCATACGCTGAACAATAGTGCCGGAAACAAAACTTCCACGGATCAAATCCTTCATGGTACATTCCGCAATCCAAGCCGCATCACGGACATCACTCTTCCTACCAGGCAACTACTTGATGAAATAAGAGTTCACTAACTTGATGTAACTCTTCCAACTCAGGCGTCAAAACACCATATTTGAATTCTAGTTTGTCGCCATTATCATTCAAGATACAGGCAAATACACTATCTTTGTGAACGTCAAGACCACATACTATTCTCATTGGAGATAACATTTTTGAGACTATGAGCTCGTCAAACATTTATTTTGAGGCTCGTCCATCGATACCTCTCACGCCATAAAGATAGGGGTGGGCTTGACTTTTTCTTATTACACTGGCATATAAATCGCAATTTATATCTAAATTTGAGCCATTGAATACAGCTGATTCCGTATTTCTCGCACGCTTTCGCTA # Right flank : AGAATCTACATATCTAACTGTAGCACAACATACTAAAGCCTAATATAGGAAATAAAAAAGAAGCTGTATTTAACAAAAAATCCCGTTTTTTCTACGGGATTTTTTATTTTAAAATAGTTCTAACTGTTGTCCTGGCGTATTCACCATCTGTATCTTTTTCCCATAAAAAAGTTCAATATCCCCAAATTGTTTATCAGTTATGCACATAATTCCAATCTGCCCATATTCAGGAAGAAAGGATTTAACCCTTTTTATATGTACTGCTGCATTTTCACTACTAGCACAATGTCGTACATAAATAGAAAATTGAAACATAGTAAAGCCGTCTTTCTGTAAATTCTTTCTAAAATCAGCATAGGCTCTTTTATCTTTCTTCGTCTCCGTTGGTAAATCAAAAAGAACAAGTACCCACATAATACGATATTCACTAAAACGATCCATTAACGTTCGGGATAACTTATACGACGTAATTCTCCATCAAAACACTTATACAATGATGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //