Array 1 15761-15600 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIUT010000027.1 Blautia massiliensis strain MSK.15.19 NODE_27_length_22621_cov_108.274, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 15760 30 96.7 35 .........................A.... CAGATCAGCCCATTTATCACAACCTTGATGCTTTC 15695 30 100.0 36 .............................. TAGTACGATTCCAGAATTTCTTTGTAGTGCATCCTT 15629 30 96.7 0 ......................G....... | ========== ====== ====== ====== ============================== ==================================== ================== 3 30 97.8 36 TTTATTTCTCTCCAACGCACAGAACGGACT # Left flank : CCCCGTTAACGATCCCCTTCACAACAACATCCAGCACCTCACCCGAATCCTGAAGCTCCTTCAGCCTGTCCCAGGCAAGCACATCCGCAGCATCCGCTCTGGAAAGAAGAATATTCCCCTGACCATCATCCCTGCGAAGAACCATCGCCTGAACCTCATCCCCCGGCTGAACAGCCTCTTTAATATTAAACCCCGGCACCCGGGAAAACTCCTCCACCGGAATAAAACCCTCAGCATAAAACTTAAGGTCAAGAACAACCCCCGACTCATCCACACTCACAACAGTCCCTGAGATAATATCACCCTCATCGATCCTCTTAAAAGAAGCCTCCAGCTCCCTCTCAAAATCCTTCATAGACTCCGCCATATCCAGACCTCCCATTCAAACAAAAAACCAACCACCGCCGCCCCAAACCAGACAACTGCACTATAATCCTAATCATTATAGCATGCACACCCCACCCGCGCTATATTTTTTGCACTGGAAATTTCTTACCCCC # Right flank : GCCGGAGGGGCGGCTGCATGGTCGGGACCCGGTGCGTCGGAGTAAGCCGCTGGTCATACTTAGCGCCTGAGGCTTCTGACGGGAAGGTACTCTGCGGCCACAAGCCGCAGAGTAAGCCCCATCTGTCTGAGCCAGGTACGCATCAGCGTACATGGCGAGTTATGGGGCGCCCTGCACGGCAGAAGACTCAGACGCTTAGTATGCCCCGGCGAAACGACCGCACCAGGCACGACCATGCAGCCGCCCCTCCGGCAGTCCGTCCGTCCCTCCCTCCATCCATCCCCACCCACAAAAAAAAAAGAGCCCAAAAAAGGCCCAAAAACGAGGAGTGCCCCGGTAGTGGCTTACCGGGGCGATTATTATGAAAAAAATTGTATGTGTAATGATACAGATACACACCATTACAGCGTCTTTCGTAACGTTCTTTCGAACTATCCCTATACTACCAAACAAATATGAACAAACAATGAACATCTCGTAAACAATTAGCGCATTTGCAC # Questionable array : NO Score: 2.56 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTATTTCTCTCCAACGCACAGAACGGACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: R [30.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 129890-129072 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIUT010000006.1 Blautia massiliensis strain MSK.15.19 NODE_6_length_170089_cov_70.4681, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 129889 32 100.0 34 ................................ TGCAGAAAGTTGGCATCCTATGATTGCTGCAACA 129823 32 100.0 34 ................................ AAGAATGTTAAAATAATTGCCCACCCCTATACCC 129757 32 100.0 33 ................................ CCTGTATTCCATCCACCTTCACGGCTGTGATTC 129692 32 100.0 33 ................................ ATAAAGAAGCAGCTGCCGACAGTCGGCATCGGA 129627 32 100.0 33 ................................ ATAAGAACTGCCGCCCCACTGTGCTTTTACACC 129562 32 100.0 33 ................................ CGCTTACTCCACGAGTTACAGTATACTGCCACC 129497 32 96.9 34 ...................A............ TCTGTCTTTGCGGTGATCTCGTGCGGATCCGGAA 129431 32 100.0 33 ................................ GGAAAAGAAGCAATGTCTGGGATGCTTGCTATC 129366 32 96.9 34 ...................A............ CTGGATATGACCTTAATTTTTTTTCGCATTTCGT 129300 32 87.5 34 .........T...CA....T............ CCCGATCACATATGCGATCACTGTAGCTCCAGCC 129234 32 93.8 34 .........T...C.................. GAGTGTAGAAGATAGTGATAGCCTGGTTGATGAT 129168 32 100.0 33 ................................ ATCAACGCAAAGAGATTCGTGGAGATTGAAAGG 129103 32 93.8 0 .............T.........A........ | ========== ====== ====== ====== ================================ ================================== ================== 13 32 97.6 34 GTCGTTCCCCACGAGGGAACGTGGATTGAAAT # Left flank : AGGAGATTTGGACAGTTATCCAGTGTTTTTGTGGAAATGAGGTGACAAAGTGTTGGTAGTGATTACTTATGATGTAAATACAGAGACAACTGCAGGAAGAACTCGTTTGCGTAAAGTGGCGAAGCAATGTACAAATTATGGAAGAAGGGTGCAAAATTCTGTATTTGAGTGTATTTTGGATAGCGCTCAAAGTGTTGCTTTGAAGGGGATATTGTCTGATATTATTGACAAAAATAAAGATAGCTTACGTTTTTATTACCTCGGAAATAATTATCAGACTAAAATAGAACATGTAGGTATAGAACGTGGAATTCCAGTAGATCAACCTTTAATTATGTAGGTGCGAATCAGAAGTACACATAAAATGCCGGCAGGATTCGCACTACAAAAATCAGAAAAGTAACATGAATAACACTAAAGAAAAGAGAGAAGGGATAATAAAAAGTAGAAAAATTATATTTATTGCATAAAAAAACAAAGAATATTTGTGAAAATTTGCC # Right flank : AACAAAGAGGAAATCAAACGGTGTGGTACATGGGACATTCCCTATGCGGGGACAAAAACCGGAAATCGCAATTAATACTTGCATTTAACAGACATTGGTGTTACAATGAACGAAACTAAGAACTTGTTGGCATAGGAGTGGGCGAGAGCCCGCTCCTATTTGCTGAGAAGGAATTTGTTCAGAAATAGGCAGAAATAGGAAAGGCAGGTGGGAAGCATGAGCAGACGGGAAGAATATGAACAGAAGACAGAGGCGATCCTTACACCAATCGTGGAGTCCAGGGGCTTTGAGCTGGTAGACGTGGAGTATGTCAAGGAAGCCGGAACCTGGTATCTCAGAGGCTATATCGACAAGCCGGGCGGAATCACAGTCAATGACTGCGAGGACGTAAGCCGTGCATTCAGCGATATACTGGATGAGCAGGATTTCATCGAGGACAGCTACATTATGGAGATCAGTTCTCCGGGACTTGACCGGCCTCTTAAAAAAGAAAAAGACTT # Questionable array : NO Score: 9.14 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTTCCCCACGAGGGAACGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : NA //