Array 1 10920-7076 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAGF010000024.1 Clostridium cochlearium strain Med78_4-601-WT-1 Contig_24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 10919 30 100.0 39 .............................. TACGATTAAAACAGATTAGCGGACTAAAAGACGCTTTCC 10850 30 100.0 38 .............................. TTATCTTCTTTTATAACCTTATATGTAGCAATGCCTAT 10782 30 100.0 36 .............................. CCCATACAAATATGTGATAGAAAAATTCTCCCTAGG 10716 30 100.0 36 .............................. AATTATGCTAATGTGGGGAAATTCGAAATTCGGATA 10650 30 100.0 36 .............................. TATTCTCCATAATTATATCGTGTCCTATAGTGTAGC 10584 30 100.0 37 .............................. TATCTCCTCCTATTCAAAAATTTTTAGTTCATTCCAA 10517 30 100.0 36 .............................. TTTACATCTTTGTTTGCTAATAAGTGGGACTATTTA 10451 30 100.0 37 .............................. TGCTTGTATCCCAAGATATGCTAGACCTAGGTCCTGT 10384 30 100.0 37 .............................. CTGCATTTCCTGTTCTATAGATGTAATTCCCTATAGT 10317 30 100.0 36 .............................. TTTCTTCAAATTGTACTCCATAAAGTGCAATTCTTT 10251 30 100.0 38 .............................. TTAGCCAATCTATCCAAAACAGAGAAAGGCAACCCTAG 10183 30 100.0 39 .............................. TCAGCATAAACTTTTCTTATATCTGTATACATTAAATCC 10114 30 100.0 37 .............................. TTGCATCATATACAGTTTTTTGCGCTATAAGTCTATT 10047 30 100.0 37 .............................. TGATGATGTACAAATTAAACCTGAACAATATGAAAAA 9980 30 100.0 38 .............................. CCAGGATTTAATACTCCTTCTTGTTCTAAGTTTTTAAA 9912 30 100.0 36 .............................. ATAGTAACACAAAGAAAATATTTTGAAAAGATACAT 9846 30 100.0 37 .............................. TAAGATACAGAGGAGGAATGGAAATGGCTTGGTATTA 9779 30 100.0 37 .............................. AAACATATGGAAGAAGTTTTCAAAACAGATGAAGAAA 9712 30 100.0 36 .............................. TAGAAAAGATGGAGAAGATTGACAAGGAAGAATTAA 9646 30 100.0 37 .............................. TTGCAAAATGGTGGAAGTTTAAGCGGGGTATTTATTA 9579 30 100.0 39 .............................. ATAAAACCACTCATTAGATTACTTCCCCCAGTTTTCCAC 9510 30 100.0 35 .............................. ATATAGAAATATGCGGAACTTGGATCTGGGTTTCT 9445 30 100.0 36 .............................. TCCTTCCAAGTGCTCTGTCAAGGAGCATGTCTACTC 9379 30 100.0 37 .............................. GACGTAAATGTTGAATTATTTTTTAAAAAAGATTTAG 9312 30 100.0 38 .............................. ATTATTGATGATTTGTTTAAAGATAAGCTAAGAAATGG 9244 30 100.0 36 .............................. CTTGGGTATTTTTCTACGTTTCTTAATGTAAGCATT 9178 30 100.0 37 .............................. ATATCTTTTGCAATATCCATGAATTTGTTTGGTTTAA 9111 30 100.0 38 .............................. CCAGAAGTTTTAAGTGTAAAACCATATGAGGATCCTGA 9043 30 100.0 37 .............................. TACAATGTCTGTAATGCACTTATCTCCGCCTGTAAAG 8976 30 100.0 38 .............................. TTTCCTCCCTTGTTTTATTCTCTTCTGGTATAGCTTGT 8908 30 100.0 37 .............................. TTACATCATCTTTTGTAATTTCCTTTACTTCTGTATA 8841 30 100.0 38 .............................. AAAGAAGCTGATATTAAACATCTTTATCCTATATTGAA 8773 30 100.0 37 .............................. TCTATAACAGTAAAGTATTTATTATCCATGATAACTT 8706 30 100.0 38 .............................. AAGAGTTAGGATATAAATGGAGTGGAACGGTGTGGGAA 8638 30 100.0 36 .............................. TTATAGTAATGATTGGAATTATGCTACAAGAGCACA 8572 30 100.0 35 .............................. GAAAAAGAATTATTTGGGGAAGAATAGAAATATTC 8507 30 100.0 38 .............................. TAAAATATTGCTTTGAGATATTTTAAGTGTTATAATAT 8439 30 100.0 37 .............................. ATTCAGAAGGTAAAAAAATAAAGGTAAACAATCCAGA 8372 30 100.0 34 .............................. ACAATAATAGACAAACCTATTGATGAACGTATAG 8308 30 100.0 39 .............................. TACGATTAAAACAGATTAGCGGACTAAAAGACGCTTTCC 8239 30 100.0 38 .............................. TTATCTTCTTTTATAACCTTATATGTAGCAATGCCTAT 8171 30 100.0 35 .............................. CTAATTTTTTTAATAATTTATCCGTAGGCTTAACT 8106 30 100.0 38 .............................. ACTTTAGATGAAGAATATAAAAATCAACTACTGGAAGT 8038 30 100.0 37 .............................. AAGTGTTTAAATTCCAAACTCATTTCATCACCTGCCT 7971 30 100.0 36 .............................. TTAGGTGGTACAACAGACGATAAGAAGGACAATAAC 7905 30 100.0 35 .............................. GAAAAACTAAAGGGAAAATCGAGGTGCAAAAATGA 7840 30 100.0 38 .............................. GCGGAGGCTAGATGTAAAAATAAATTTAAGAAACTAAA 7772 30 100.0 36 .............................. ATCAAAGAGGATTTGGTGTGCTTAGCTAAAGGAATT 7706 30 100.0 35 .............................. AAAAGTAAAGTTTTAAAAATTGGTGTATTCGGTAA 7641 30 100.0 39 .............................. AAAGTAAAGTTAATATAGCAAATATAATATATTTGTATT 7572 30 100.0 36 .............................. TATAGTGTAAATCCATCATTAAATGCTTTTGCAATA 7506 30 100.0 35 .............................. CATTGAACATACTAATATATTACAAAACCCATTGT 7441 30 100.0 37 .............................. ATGGCAAATAAATTTGAAAAGGCTGTAAAAAATAGAA 7374 30 100.0 37 .............................. GATTACAATGGTGACGACGATCAGTGGTTCATGCCTG 7307 30 100.0 38 .............................. TATGTTACCCATGTAGTTAAATTTGTAGATGTTACAAA 7239 30 100.0 38 .............................. ACGGTACAGAAACAACTATAACTAAAGATGATAGTGGT 7171 30 100.0 36 .............................. TTTTTAAAGGTGCTATACTACCGCTAAGCGAGAAGG 7105 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 58 30 100.0 37 GTTTTTAGAATAACTATGAGGGATTGAAAC # Left flank : GACGCATATGTTTGCTATATTAGTTTACGATTTTGGTGAAAAAAGAGTGGGCAGAGCTTTAAAAACTTGTAGAAAATATTTAACTTGGGTTCAAAATTCTGTGTTTGAAGGTGAAATAAGTGATGCTAATTTAAAAAAGTTAGAAATGGAATTAGATAGAATTATGCATGGTGATGAGGATTCGGTAATTATATATAAGTTTAGAAGTATTAGATATACTACAAGAGAGGTTATAGGTCTTTCAAAAAATGAGCAAGATATATTTTTATAGAAAATTTCGGAAACCATCGTTACTTGTTTTAATAATGATTATTGGATAAGAATTATTTACAAAGTCGTCGACCCCCAATCCTGTAAAAAACCCGGGAGGTCGACGACAATTTTTAATTGGCTCATAAGTATTGATGTTATTGATGTAAAGCAATATTTGTATATTTTTGTTTACACTTTGTTAATAATGGATAGTTTTAACAAAGTGTGTTATAATGCAGATGTAATTG # Right flank : TAAGAGATAAGATGAATCTATATTATAATAAGTAGTGTTGACAATCCAAATTGTAGCCTTTATAGGAATAATCTTTGAATACGCAAAAAGCTTGGTGTTTGGATGGATGTAATATCTGTTTTAAAAAAGTTATATTTACAGGTTTTAAGTTTTTATGTATAATTAGGTTTAAAAATCGAGTATTTAATAATGTAAATGCCCAAAATGGTAAAAGGTAAGTTAGTGAGATTTTAACACAATTCCATTACTGTAATAGGTAGTTAATTACAAAATATCACTAAAGGACGCATTTATTTTACTTTCAATAAACATATATTCACTTATTTTGAGGAGGAATTTATAATAATGAATAAAAAAAATCATAAAGCATTAGTAAGTGCTATAATAATGAACTTAGTATTAACTTCAACACTAGTTTCGACAAATGTACAAGCAGCATCAGAAATAACAAGAATGCCAGGTTCTGATAGATTTACAACAGCACAAACAGTTGCCAAAGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGAATAACTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA //