Array 1 599-35 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWWU01000004.1 Aeriscardovia aeriphila strain LMG 21773 Contig_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 598 36 100.0 30 .................................... GGAGTTCAGTATTATTCTCAGGCTACTGGG 532 36 100.0 30 .................................... GCCCGCAAATGCACATGCCGCGCCGTCAAG 466 36 100.0 30 .................................... CTAGCTGGCTGTCCATGTCGACAATATACA 400 36 100.0 30 .................................... TGTCGCTTGCATCCTCGGCATCGTGTTTTT 334 36 100.0 30 .................................... CCGGTCGCGGGCATGGTACGCGATGCTTCT 268 36 100.0 30 .................................... CAGATGATAGAATAAAAAGCACTGCACACC 202 36 100.0 30 .................................... AATTGGGACTCAAAACAACCCGCAAGCGCA 136 36 100.0 30 .................................... TGAAGAGTGAGAAGGAAGCCAGGGCTAAGG 70 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 9 36 100.0 30 GTTTCGGAAGCCTGTCATTCCAGAGACTTGAGAAAC # Left flank : TGAACAGTCTTTTCAAGAAGGTAATGTTCTCTCAACTGATCTCGTTTCTTCAAGATGAACAATATCAGGAACTTCACGAGATCACCGAGCAGCTATATCAATTTATGGTCAATCTCGTCATGAGCAACGAGATGGATATTGAACTGGATAATGAATTTGACCCTAAACTACTTCTTGAATTGTTCCATCCGCGACTTGCAGAGTCAGATGCTAATTCGGCATTTGAAGTGCTGCAAGATATAATAAAAATTGCCGGAGCTCTGCAGGTTGAGCAGACACTCGTGTTGCTACATGTATTTGATTACTGCACGAATGAGCAGATTGAATACTTACAGCGTGAAACTTTAAGACAAGAATTACAGGTACTTTGCCTTGAGAGGTCTAACCAGCCTCTTGAGTTTGAGAAAGGGCGGAACTGGTATCTTGATGCAGATTGGACAGAACTTTACTGAATGTCTCACCAATGTTCAGCACTTGTTCAGCGAACATTAAGGCTATCG # Right flank : CGAGCCTGAAGGGTGGGGCGTGTGATGGTATGTTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCGGAAGCCTGTCATTCCAGAGACTTGAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.60,-3.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [25.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 1038427-1039254 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWWU01000002.1 Aeriscardovia aeriphila strain LMG 21773 Contig_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1038427 36 100.0 30 .................................... GGCATGCCGTTGACAACCTTGCGAACGAAT 1038493 36 100.0 30 .................................... ACCACTGCACATCAGCCGTATGATCAACGC 1038559 36 100.0 30 .................................... AAAGTCAAGGTTTACGAGGCTTCTGTGATC 1038625 36 100.0 30 .................................... TTAACGGTAGTACGATCAGCGCGCAAGTCA 1038691 36 100.0 30 .................................... CAGCCTGCATCGTCTCAAGTGCATAAAGCG 1038757 36 100.0 30 .................................... ATACCATCACACGCCCCACCCTTCAGGCTC 1038823 36 100.0 30 .................................... CCTTAGCCCTGGCTTCCTTCTCACTCTTCA 1038889 36 100.0 30 .................................... TGCGCTTGCGGGTTGTTTTGAGTCCCAATT 1038955 36 100.0 30 .................................... GGTGTGCAGTGCTTTTTATTCTATCATCTG 1039021 36 100.0 30 .................................... AGAAGCATCGCGTACCATGCCCGCGACCGG 1039087 36 100.0 30 .................................... AAAAACACGATGCCGAGGATGCAAGCGACA 1039153 36 100.0 30 .................................... TGTATATTGTCGACATGGACAGCCAGCTAG 1039219 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 13 36 100.0 30 GTTTCTCAAGTCTCTGGAATGACAGGCTTCCGAAAC # Left flank : GCACGGTTGTGCATGAATGTACATACTTGTACACGGCTGTATACGAATATATTCGCTTGCCCACATTTTTCTTCTATCCTTGATTCATCAAGGAGATTGCAATGGATGAAATTGACGAAAAACTGTTCGCCCTGCTCGAAGGCGTATGGACGGAAGAAGAGAAAGAAGCCCACGATCTTGAAGATTGCGGTGAATCTTTCATCGCGACATATTGTGCATATAAATCAATGCAAAAGCACCATATCTCCGTACCCGAAAAGATTAAACCGGCGGTACTTGGAATCGTCAAAGATTTTTTATAGGAGGCTGGCATACATTTCTCAATGACAATCTGTGGAACATGTCACCTCTCTCACTTGAGCATGCTTTCATGTATTGAAGCCAGTACATAAATAGGCGCTCCCGGACTCTCTTCCCAATACACAGCAACAGCGGGTAGCTTGCGCAGACTAACGCTCTCAACTATGGGCAGAAACTACCATACTGGCCATGATGTCCAT # Right flank : CTTGACGGCGCGGCATGTGCATTTGCGGGCGTTTCTCAAGTCTCTGGAAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCTCAAGTCTCTGGAATGACAGGCTTCCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.60,-3.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [51.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //