Array 1 20573-20999 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_ARXZ02000045.1 Bacillus thuringiensis T01-328 contig000045, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	================================	===================================	==================
     20573	    32	  84.4	    35	....T....CT.G.....A.............	CATTGGCGGTAGTTCATAAGTAACAACAAATGGAT	
     20640	    32	  87.5	    34	.........CTAG...................	ATGATATTCAAAGAGCCTGAACAAGTGGAATCGA 	
     20706	    32	 100.0	    35	................................	ATAATTGAATATGAGCTGCCGCCGATGGAAGGGAC	
     20773	    32	  93.8	    33	...................T..A.........	ATGGAAATGGAACGTTCTTACGGATCAAAAGAA  	
     20838	    32	  96.9	    33	..............G.................	ATGTAGCTGGTATTAATGCTTTGTGAAAAACAA  	
     20903	    32	  96.9	    33	....................A...........	TAAATTACTTGCTGCCTTATCTAGATTACTTTC  	
     20968	    32	  68.8	     0	......T..CT.G......TA....G.A.G.C	|                                  	
==========	======	======	======	================================	===================================	==================
         7	    32	  89.8	    34	GTCGCACCTTATATAGGTGCGTGGATTGAAAT	                                   	       

# Left flank :   ATCCGATTGACATTACTAGTATGCAGATTACGAAAAGTGTAATGTCTGAGCCTGGGAAAGATAAAGGTTCAGATACGATGGGGATGAAGCATGGTGTTGATCTTGGAGCTTATATATTTTATGGAAGTATTCATATGCAATGAGCAAGGAAGACAGATTTTACCAAAGGTGATGCGGAAAAGATTAAAAATGAACTGGTTACATTGTTTGGAAATGATGGGTCAGCAGCACGCCCTGAAGGAAGTATAGAAGTACATAAAGTTTGTTGGTGGAAACATAATTCAAAACTTGGCCAGTACTCTTCCGCAAAAGTACACCGTTTACTGGATATTAAGCGGAACATTGACGAACCAAAAATAATTGATGACTATAACATTTTGGTAAAAGAATTAGATATTTTAAAAGTGGCTATTATTGATGGACTGTAATGAAGAAAACGTTAGAATAATTGAAGGAAAGCGTATTTATTAAAAAGTTAATCAACCATTTATTAAAGAAAA
# Right flank :  CTGATAAGATAATTGATAGTAATTTAGTGTTTTTGTTGGAGTAAGGGGACCTACTTCAATTCATACGGCAACTAGTGTTGATCCGATTGATATTACTAGTATGCAGATTACGAAAAGTGTAAATTCTGATCTTGGTAAGGATAAAGGTGCTGATACGATGAGTATGAAGTATCGTGCTGATTTTGGAGTATATGTCTTTTATGGAAGTATTAATACATAGTTAGCAAAAAAGACAGGTTTTACTAACGAAGATGCGGAGAAGATTAAAAATGCACTGGTTACATTGTTTGAAAATGATGCATCAGCAGCACGCCCTGAAGGAAGTATAGAAGTGCATAAAGTTTGTTGGTGGGATCATAATTCAAAACTTGGTCAATACTCCTCTGCAAAAGTACACCGTTTATTAGAGGTTAAACGGAATATTGACGAACCAAAAACAATTGATGATTATACTGTATTGGTACATGAATTAGATGGTTTAAAAGTTGAGATTATTGATG

# Questionable array : NO	 Score: 6.59
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.49, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.34,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCACCTTATATAGGTGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:56.25%AT]
# 	Reference repeat match prediction:         F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-3.10,-2.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [9-14] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [80.0-70.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [10.05,0   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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