Array 1 12454-13415 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDEB01000007.1 Enterococcus cecorum strain CB-32 32-CB_1_contig_4.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 12454 32 100.0 34 ................................ AAGTATACGCTACGGTAATGAAAAAAGATCAGTA 12520 32 100.0 35 ................................ GCAAAGATGTTCCGAAAGAAGAATACAAGCGTGTA 12587 32 100.0 34 ................................ CATGATTTGTTAAAAGCTATTAACTCAAAACCGT 12653 32 100.0 34 ................................ GGAATGAACGGAAACAATCTAATGGTCGGCGGAG 12719 32 100.0 34 ................................ GTTCATATCTTTAGTTTCAACTCGTGGGAAAAAG 12785 32 100.0 34 ................................ AGCACTTTTGGACGATATAAGAAAAGTTTTAGGA 12851 32 100.0 34 ................................ ATCAAGAGTCACATAGCGTTCAATATCAAAACCA 12917 32 100.0 34 ................................ TATGAAAGCATGCAAAATAAATTACAAGAAAAAT 12983 32 100.0 38 ................................ TTCGTAAGTATTCATTAAGACATAATTAGGTTCTACGA 13053 32 100.0 34 ................................ ATCCCTAACAGCTGCTTGAATACCGCCCTTACTT 13119 32 100.0 33 ................................ TGTTGTAACATCTTTGACTAGTCGTTTATCACT 13184 32 100.0 36 ................................ AACGTAGTAAATCAAATAAGGCAGCGGAGTGGTCAC 13252 32 100.0 35 ................................ TTCAACATATTCTAATTCCATTCGTCGCTTAGCAA 13319 32 96.9 33 .............C.................. TAGTGAAATACATACCAAAAAGTGCATTAAAGT 13384 32 93.8 0 A............C.................. | ========== ====== ====== ====== ================================ ====================================== ================== 15 32 99.4 34 GTCTCACCTTACATAGGTGAGTGGATTGAAAT # Left flank : CAATTACTTGCAAAATCAATTCGTGGTGATATTTCAGATTATCCCCCTTTTCTCATATAATTTGGTGATAACAATGATGGTATTAATAACATATGACGTAAATACAGAAGATAGATATGGAAGAAAGAGGTTGAGGAAAGTTGCAGAATTATGTGTTGATTATGGACAAAGAGTTCAAAATTCTGTTTTTGAGTGTTCTTTAGCCCCTGCTGAGTATGTTGAAATTAAAGAAAGACTATTAAAAATAATTGATGAAACAACGGATAGTATCAGATTTTATAATCTCGGGAAAAACTGGCAACATAGAGTTGAAAAAATAGGATTTGATAATTCGTATGATCCAGATAAAGATTTGTTAATTTTTTGAGTTGAGCGAACCTATAGTGAACAGAAAATCATATATAGGTTTGCCTTAAATAAATGATATTTATCTAGATTTTTATCAATTATCAAAATGGTTATCACTTATAATTATGTTATAAACTGCGCTATTTCGCGCA # Right flank : TAGTTTTACTGATACCACATCATTAAGAGTACAATTTGAGAATTATGTAGACCAACCTCCCCAAGCTAAGTGACTTTGGGGAGGTTGGTTTGGTTGGGTTATTCTGCTAGTTTTACGATTTTGGTGCCGTGGAGTTCGTGGATGCCAAGTTGGCGGGCGATTTCTTCGGCGTTTTCGTAAGTGATTTGTCCGCCTGGTAAGATGGTGATGCGTCCAGCTGCGTAGTCAATCAATTCTTTTAAGCGTGGGAGAGTGTCTGAGATGGATTCACTCATTGGACCACCATGGGTAAGGATACGATGGACACCGTGCTCTGCTAACCAGTCAATGGCTTCAAATTGGCGTTCGGTAGGGATTTCGTCAAAGGCCATGTGGAAGGTAATCTGCAAACCTTCTGCGACTTCAATCAGTTCTTCCATCGCCTCTTCGTCAATCCAGTTACTTGGAGTCAGGCAACCAAAGACCACGCCATCGACACCGAGTTTTTTTGCTTCAATCAG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACCTTACATAGGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.38%AT] # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //