Array 1 64526-60938 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXHN01000017.1 Moraxella catarrhalis strain N12 B617ctg8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================================ ================== 64525 28 100.0 35 ............................ CATATCTAAATGGCTGATAACCATTAAAAATTTAC 64462 28 100.0 32 ............................ CAAAAAACCAACATAGTAGAGCAAATGCAAAA 64402 28 100.0 32 ............................ TTAGAATCCATCGGCATACCCAAAGACACGCA 64342 28 100.0 33 ............................ GTTGTGTTTGTGAACAAATATGGGTGTTTACAT 64281 28 100.0 32 ............................ ATGGTACTCTCCTTTATTTGGTTAAATTTAAT 64221 28 100.0 32 ............................ ATGCTGTTTGGTCGCTTCTGCTACAACACAAA 64161 28 100.0 32 ............................ AAAACAGAACGCTACTTGAAGCGTTGTATGAC 64101 28 100.0 32 ............................ TCAACGCCCCTAAGGGTAGGGGTAGGCAAGAC 64041 28 100.0 32 ............................ GTACCGCTTTCCCCCCTGAATTCTACTACTCT 63981 28 100.0 32 ............................ AATGTGGGGAATATGATAAACGCTTAGCAGAT 63921 28 100.0 32 ............................ TATCAACGCCCCTAAGGGTAGGGGTAGGCAAG 63861 28 100.0 31 ............................ AAATCTTTCTCAATTTTTTCAATATCTAACA 63802 28 100.0 32 ............................ TATCAACAAGTTTTTAAAAGCATTGATAAAGT 63742 28 100.0 33 ............................ TTTCATTATCGTACTCTTTCCCAAAATCTTTCT 63681 28 100.0 33 ............................ AAGGGTAAATTAAACACCATCAAAAAGCCAATC 63620 28 100.0 30 ............................ TATATAAGCACAAAAAATCTGCGGGCGGAT 63562 28 100.0 32 ............................ ATGCAACACGCATCTCTGCTTGATATGCCAAC 63502 28 100.0 32 ............................ TAGAACAAACCCTTGAACAAAGGAAAAATACC 63442 28 100.0 33 ............................ AAGCAATGTATCGCCTACCTGTGTGTTGCTCAA 63381 28 100.0 31 ............................ GTCTATGCCGTGAATTCCACCTAAAAAAACG 63322 28 100.0 32 ............................ GTGTGAAAGATTTGGCAGAATTTTTAACTACT 63262 28 100.0 32 ............................ ATACGCAATACTAGAAAACTATAGCGAGGTAT 63202 28 100.0 32 ............................ TATTTTGTTTGGTTTTGTTTGTAGGCATGGCA 63142 28 100.0 31 ............................ AACCGAAAGAAAAAGTTTATCGACTTTATGA 63083 28 100.0 33 ............................ ATATGTAAATCAAGGAAAATTCTACTATTACCC 63022 28 100.0 33 ............................ TTGCAGGGCAAGGCGTTAAAGTACTATCAACAA 62961 28 100.0 33 ............................ AAGCCGTGAGCTTGCTCAAAGCCACGCTGTTGT 62900 28 100.0 32 ............................ TGATAACGGTTTAAAATTAGCAGTAATGAAAC 62840 28 100.0 33 ............................ ATAACAGCGTATATAATAATCTTTGTTGTTTTC 62779 28 100.0 32 ............................ TAAATTGTGGTCGCCATAACATCTCACATAAT 62719 28 100.0 32 ............................ GACCAAAAGATCAAAGGGCTTAAAGCTAAAGA 62659 28 100.0 32 ............................ GTTTAGAAGCTTACTTAACATACAAGGGCTAT 62599 28 100.0 33 ............................ TAATTAAATTCCCAAAGCCTTGCACAATTACAC 62538 28 100.0 32 ............................ TCTGTATAAATGAACATATTCCCCTACATTTT 62478 28 100.0 32 ............................ TAGCCGACCAAGTGAGTTTGATAGAACTTTTA 62418 28 100.0 32 ............................ GTGAGCTTGCTCAAATCCCCTGCTTTGTAACT 62358 28 100.0 33 ............................ ATTAGGGAATGAGTCGCAGGGCGTAATCAAAAA 62297 28 100.0 31 ............................ AAAACCCTGTGATGATTGGCGTTGAACAAAT 62238 28 100.0 32 ............................ GTATTTTGTAGTTGAATATAAACGCCATCATC 62178 28 100.0 32 ............................ AATGGCTCAAGCCTGCATGGTCATAATATACG 62118 28 100.0 31 ............................ AGAGCAACACGCCATTTTTAAGTGGCTTACA 62059 28 100.0 32 ............................ ATAGCAGTATATCCGAATCAATAACAGTATAT 61999 28 100.0 33 ............................ AGTAAATCAAGAAAAGTAGTCGAGAAAATACTT 61938 28 100.0 31 ............................ ACTCAGGCAAGGCTCAAATGCACAAGCTTGG 61879 28 100.0 32 ............................ AACAAATATCATTGCCCCAAGCCGTGAAAAAC 61819 28 100.0 31 ............................ CCACACTTCCCACCCTGATTATAAAAAGCCC 61760 28 100.0 32 ............................ ATGACAGAGAACGGTTAAGTACAACGGCAATC 61700 28 100.0 32 ............................ TTGATACACAAAACATGTCTATTGTACTTTCT 61640 28 100.0 32 ............................ TTTCGCAATAAGTTTGGCGAATATATCTCACT 61580 28 100.0 31 ............................ AATCAAGCCGGTGGTGTTGATTTAGTGAGCA 61521 28 100.0 32 ............................ AGCGATTGAAAGTAATATTAATAGCTTTAATA 61461 28 100.0 48 ............................ ACAATCAACGCCTAGCATTGGTTGATGAGTTTACCAAATTGGTTGCAA 61385 28 96.4 32 .............T.............. TTTGGTGATTACAAGCTACCGTCCGAATTTCG 61325 28 96.4 32 .............T.............. AACTCGGCAGCAATACCGCCAAGACATGTAGG 61265 28 96.4 32 .............T.............. AGCCTGAGCTTGTCGCTGATGTGCTTAATCAC 61205 28 96.4 32 .............T.............. GACGCAAAGATTGCAATCAGATAAAACAAAAA 61145 28 92.9 32 ...........TG............... TAATCTTGAACCTATTTCATAAATAAACGGCT 61085 28 100.0 33 ............................ AACTGTGTTAATCCGCTCAGACAAGCTTTGATT 61024 28 96.4 31 .............T.............. CTTACAATTTTTTTGTCAAAATGCTGCATAA 60965 28 92.9 0 .............T....T......... | ========== ====== ====== ====== ============================ ================================================ ================== 60 28 99.5 32 CTTCACGACCGCACAGGTCGCTTAGAAA # Left flank : GTGCCTGTGCCAAGTAAAATTACTGTGGTATTGGCGATGGGGATATTATAATAGTGGTTTTGGTATTTCGTTTCGGTCAGATATAAGATACGCCCGTCTTTTTGCATGACTCGGCAATGCTCAAGATAAAATAAATTCGCCCGTTTGGAATGTAAAATTGCTTTCAAATCGGTCGGTTTGAGCGTATTCATAATGATACAAATCCATGTTTAATGATTCAATTTTATCCTAACAATTTTCAACATCATTTAATATGATTTTATTGGATTATAAACTAAAAATAAATTTATACCAATCATTTTTTAATTGTATTTAGCGATTAAAATGTTTTAAGATAACCCAACCAGAAGATGGCAAAATAACGGATTGACCCTTTATTTTTTACTATTTAAAAACTTGAATATTTTCAATAAGTTATAACATTCAGATTTTTGATTGGGTTTTTGACAAATTTTATCATAATGGCTTGTTATTTCTTATTATTTTGGTTTATAATAACT # Right flank : TTTCGTTCTACAACTACGCTGATTATTTAAAATTTTTGTACCAATCCCTTGAAAATTTTATCCTTAACCATTATGAAGATGGGGAATTTATATTAACTTTTTTGGGGTAATTTATGACCGAGCAAACCACCGAACAAACCACCATGGAAGAGATTACGGCTGAGACGACAACCGAGCAAGTCGAAGCACTTCACAGCCAAATCCAAGCACTAGAAAGTGAAGTCAAAGAAGCCAAAGAGACTGCTGCGCGTGCCAATGCCGAAAGCTATAACGCCCAACGCCGCATGGAACAAGAAACCGACAAAGCCAAAAAATTTGCACTACAAAAGTTTGCCAAAGAGCTTTTGGAGGTGGTTGACAACCTAGAGCGTGCCATTAAAGATGCTGAAGAGACAGGTGCAGATGACGCATCACTTGAAGGCATTCGCCTAACACATAAAGTACTGCTTAGCGTCCTTGAAAAAAATGGCGTCGTGGCCGTGGGTAATGTCGGTGATACA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACGACCGCACAGGTCGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.10,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //