Array 1 541-6 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QTVA01000031.1 Ruminococcus sp. AF43-11 AF43-11.Scaf31, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
       540	    36	 100.0	    30	....................................	GTACATATATCGTTCTTGCATCATTTTGTT	
       474	    36	 100.0	    30	....................................	AACTAATAGAAACAGTAAAATTTGGTTACA	
       408	    36	  97.2	    30	A...................................	GACACACTCAAAGACTTTGCAAAATGGCTT	
       342	    36	 100.0	    29	....................................	ATCCCGTCAACGGCTTTAATATGACGCTT 	
       277	    36	  97.2	    30	....................C...............	CGTTAATCGTGCCATCATCAGAAACATTGG	
       211	    36	 100.0	    30	....................................	TGGGGCCTCCGTAAACCACATATGCAAAGG	
       145	    36	 100.0	    30	....................................	GGCTGTTTCTTTTTGCGTTTCCACAAAGGC	
        79	    36	  97.2	     2	...................................G	GC                            	Deletion [42]
        41	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
         9	    36	  99.1	    26	GTTTTACTACCTTATAGATTTACACTATTCTCAAAC	                              	       

# Left flank :   ACCTTAATTATAAACAATTACTACGGTAATGGCAAGAAAAAATGCACTCATTTTCTGTTACAGAAAAAACAACCCCACGATTATTTTACCGTGGGGTTGTTTTCATAGGGTTGCTTTTCAATTATTTTTAGAGATTAAACATCTTTGCAATATTTTTCAGCAAGGGCAAAGAACGCTTTTTCGAGCGAATCCAAGGTTTGTTCCGTCATACTGACTGACATACTGTTTTTGTCGGAAAATATGATTTCAACGATTGTAACCGTGGCGTCATCGACTGTCAGTTCTTTGTTTTTGGGATTGTATTTTTTCAGAATTTCCAATGCGTCTTCGGCGGTATCACACAGCAGTCTCATATCCGTTTCGTCGATCAAAACATTTTCAAAAGCGATATAACCGCATTTGCAGATAGCGTCAAAAAGGAAATTTACACCTTTTTTTCGCACATAAAAAGAACAGCAGTATTCTCAAACAAATAATCGGAAACATAAACAATCGTGTTG
# Right flank :  CAATAT

# Questionable array : NO	 Score: 5.84
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.36, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTACTACCTTATAGATTTACACTATTCTCAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.22%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-0.60,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [1-1] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [8.3-68.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.27   Confidence: MEDIUM] 

# Array family : NA
//