Array 1 14379-13511 **** Predicted by CRISPRDetect 2.4 *** >NZ_SRHR01000100.1 Pseudomonas aeruginosa strain F815101 contig00099, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 14378 28 100.0 32 ............................ AGGTTCGTGGCGGACCGGAAAGACCTCAACCG 14318 28 100.0 32 ............................ CTGGACGCAAGCAAGATCGTAGGGCGCTGCCC 14258 28 100.0 32 ............................ ACCACCAAGATGGTCCAGGCCGTGCGTTCGAT 14198 28 100.0 32 ............................ GGCCAACCAGATCGTCTACACCGCCAACGTGA 14138 28 100.0 32 ............................ TTGATGGGTTCGTACTCAGGCCCGGAAAACTC 14078 28 100.0 32 ............................ TTCCACCCCGAGCAGTTCGATGTGCTCGAGGC 14018 28 100.0 32 ............................ ATCAAGGTCAACCTGGGCTCCGGCGCCGGCGG 13958 28 100.0 32 ............................ AGGTCTTCGAACTCGAACAGCTTCGCGAACTG 13898 28 100.0 32 ............................ TCCAATGCGGCGCGTACTGCCCGCGCCTGCTT 13838 28 100.0 32 ............................ AATGCGTGTCGAGCGTTGGTGCTGGGATGCCG 13778 28 100.0 32 ............................ AACCAGCGTGTCGACGCCGAGGCCCAGGCACG 13718 28 100.0 32 ............................ CTCGATGACGCATATCGCGAGGCGCTGGCCAA 13658 28 100.0 32 ............................ TGTGTACCCCTGCGCGTGGAGCGCGGGGCGAC 13598 28 100.0 32 ............................ GTCATGGGCGAGCTCTACGCCAACCCGCAAGC 13538 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 15 28 100.0 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : GGCCAACCCGCAAGTCAGCAAGGGCAT # Right flank : CTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATGCACGAAGTGAGGTTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGACCAAGGCAGGCACAGAAAACAGCTTGAGCAGCAAACATGAAGCCCGCTCGAACGTCCCGTAGGGCGAATACCGCCACAGGCGGTATCCGCCGATGCCCTGGAGAGCCGGCGGATAACCGCAAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [38.3-16.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //