Array 1 257964-254025 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG704573.1 Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 strain ATCC 19606 supercont1.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================== ================== 257963 29 96.6 31 ............................G TAACGCTGGTACTCTGTACGTTCTACGTTAA 257903 29 100.0 31 ............................. TCAAGAGAAGTTTTATAGTGTTCGTGTATCT 257843 29 100.0 31 ............................. TTCACTGGATTACGTTCTAAGCCTTCCTGAA 257783 29 100.0 31 ............................. ATAAGCCTTATGAGGTAGATACTTCAAAAAT 257723 29 100.0 31 ............................. ACTCGGTCACAAGGCGTAGTCTACGGTTTTT 257663 29 96.6 31 ............................G TATCGATACGCCAATGAAGCTATCAGAGTTC 257603 29 96.6 31 ............................T CAATTGGAACGATATCAGGCTAATAACTACG 257543 29 96.6 31 ............................G GTACAAGCCATCACATGTATCTGCTAGTTCA 257483 29 100.0 23 ............................. ACACATGCCAGATGGTTCAAATG Deletion [257432] 257431 29 96.6 31 ............................G TATCGATACGCCAATGAAGCTATCAGAGTTC 257371 29 100.0 31 ............................. GTAGGAAGCTCTACATCTAGTTTTAAATAGG 257311 29 96.6 31 ............................T ATGAGTGAGGGAGTAGCAAATGTCTGAACAA 257251 29 100.0 31 ............................. AGAAAGCTGAGCAATTGCCTGCTTTGCCTAT 257191 29 100.0 31 ............................. ATCCCATTAAAGAAATCATTTTGGTCTTGGA 257131 29 100.0 31 ............................. AGATCAGAGGCACCAAGCAATGCAGACTCCC 257071 29 96.6 31 ............................T TTACCCTTGCCATGCTTGCCAGAATTAGAAT 257011 29 96.6 31 ............................T ACCACCCATTGAACGTTAGCCATATGAGCAA 256951 29 96.6 31 ............................T TCCATGCTTCACATAGAAATTCATTGCAAGT 256891 29 96.6 31 ............................T ACTGCTTCCCAAGTCAGTAAAATGATTGTTA 256831 29 100.0 31 ............................. CAGTAGTATCATTTCAATCGAGTAACGTTGA 256771 29 100.0 31 ............................. AAAAGACCCAAAGAAATTCGCTCGTTTCTTT 256711 29 96.6 31 ............................T ACACGGCGATCTTGTTTAATAGTCTGAGTTT 256651 29 96.6 31 ............................C AATACAAACATTTGACTGCACATCTGGAACA 256591 29 96.6 31 ............................T AGAAAGCTTGGAAAACAAAGGTGACTGTAAT 256531 29 100.0 31 ............................. GAAACATCTGTTATTTTTATTGATGAGGTAC 256471 29 100.0 31 ............................. CCCTTTGGATTGAAGACTCTGCTTTTGCTGC 256411 29 100.0 31 ............................. TTCACCAGCCTCGGCTAGACTTGATGCTCCT 256351 29 100.0 31 ............................. AGCAAAATTCAAAAGAATTACCCCAGCCAAG 256291 29 96.6 31 ............................T TGGTGTGCCTGCGCCCACTCAAGCCATGATT 256231 29 96.6 31 ............................T TTAACCGAGATCAAGAAGTAATTGCTTGGGC 256171 29 96.6 31 ............................T ACAATACGACGTGATAATGCAACTAAAGCCC 256111 29 100.0 31 ............................. CGGTAAAATTAAGTTACCTGCTAAACTTGTG 256051 29 100.0 31 ............................. ATCAAAGCCTTAATCGCTAAATCAACTGCTA 255991 29 93.1 31 .............C..............T TTTGTTTATACGGTTAATAAATCAGTACAAT 255931 29 100.0 31 ............................. TTACACAGGCATGGCAATGAAAGTGTTCTTT 255871 29 96.6 31 ............................C CTCGTGGAAAAACTTAAAAGCCATCTTCGTA 255811 29 96.6 31 ............................T TCATCTAAATGTTTTTGACGTTCAGCTTCAG 255751 29 96.6 31 ............................T AGACAGCTCATTTAATCCGGGTGAGAAACAG 255691 29 96.6 31 ............................T AGATAATGTTGAATGGGTTGAAACTACCTAC 255631 29 100.0 31 ............................. GTTCAGCATTCCCCTTCGGGGTCAACGTCCA 255571 29 100.0 31 ............................. TTACCCCTCCTTACTTTCTGCTTTAACTTCT 255511 29 100.0 31 ............................. AAACACCAAGCCATAAAATTAATTACAGCAA 255451 29 96.6 31 ............................T GTTTTGCTAATTTATCAATATCGATTTTCAC 255391 29 93.1 31 ...AC........................ CAGGGGTCAAGTTCAGAAGATTTACGTTACA 255331 29 82.8 31 ...GC.......CC..............G GTATTAGTGCGAATTGGCTTTTAGCCCACGC 255271 29 89.7 31 ....C.......G...............T TAAATGCTCAACTATTTCTGTAGCTAATGGA 255211 28 82.8 31 ...GC....T...-..............T TCAAATGATTTAATGAGCTTGTAGCCATTTT 255152 29 89.7 31 ...GC.......T................ CGTCTTCTAATGATGGACTTTAATCCAATAT 255092 29 82.8 31 A..GA.......TC............... TCTCACTGAAGATATGACCATCACTTTCTTC 255032 29 82.8 31 ..CGC.......CC............... AGCCATTTACTTTGATAAAGCGTCACATAGC 254972 29 96.6 31 ............................T AGGAAATTCTATCGGCCCAGCATCTACAAAT 254912 29 100.0 31 ............................. AGAGACACATCGTTAATAATCTCTTGTGCGG 254852 29 100.0 31 ............................. TGAGCAAATTATCAATTGATCTATCTGCAAG 254792 29 89.7 31 ............CC..............T AGACGGTGTTACCTGTAGGCGGTGTCTACTG 254732 29 89.7 31 ...TC.......C................ TCGTTTGAATAATATGGACAATCCAGCCAAT 254672 29 86.2 31 ....G.......TC..............G CAGCATCAAACGAGATATTGGCTAACATATT 254612 29 79.3 31 ...G......A.CC...........C..C AAATAGTTTTAGCTATCTGAGCATTTAATTT 254552 29 89.7 31 ....G.......C...............T TCATCACGTAGCCTTTTACACGCATCTTGCG 254492 29 93.1 50 ....................C.......T GTACGCTGAGTATTGATATTGACATTCAGGGCATTCAGAATTTGGCGCTC 254413 29 89.7 30 ....G........C..............C CAGTTTGCTGAAAATCACCAATACGGTCTT G [254387] 254353 29 79.3 31 ...TC......TCC..............G ATTCTATGAGCGTGACCATGACTCTATTTAA 254293 29 89.7 31 ...GC.......C................ TTATCCAGATAAAACCATATCTACAAAGTGG 254233 29 93.1 31 ....G.......................G ATCATCTACAGTGATTGAATAAACGGTTTTT 254173 29 82.8 31 ...GC......TG...............C AACGACGACGCCGTGTGTTTGTTATCGGAAG 254113 29 79.3 31 ...GC....T..TC..............C AAGTAGGATTTGCAGCCCCAATAGTCTTTAT 254053 29 75.9 0 ....G....T...C.A........AT..T | ========== ====== ====== ====== ============================= ================================================== ================== 66 29 94.5 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCAAGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGAATTAGTTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCGGACCTAGTTAAAGATGCTTTTGTTATGCCAGTCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACATTTAACCCAAATACCTTATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTGAATCTTAAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGCTTTTTCGAATCTTGGTGGGATGGCGTCAATTGAACTGATAAAACAAATAATTGTTTTTTAAAGTTAATTTCAATTCAAAAAATAACAGTGTACACAATAGTGTACAAATTATTTGTTACTAGGGCATTTCTCTGAGTTTAGTTGTCATGCTGGGTGACGAACTCAGGAGTTAAAAACACTCCTTTTAGTGGATCGGATTATGAGGCTCGTTATTTGGCTTCAATAAATTTATTGAGCGCAAAACCATATTTGGTGATTGGATTTTAAATCTTGAATTAACTTAGCCGTTCAAGTGGCTGATTAAGTAGCTTGGTCGCGTTTTAAGTGTGAGCAAGTTATAAAAATCACGAAATACTTTCGATTGCAGATACGTGCATCCAGTCGCGTGTACATTGCCGAAGTTGAGGATTTAGATGGTGGGGGGTATCCCTATGTTCAGGTTATTTGCAGAAGTAA # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.00, 8:1, 9:0.52, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [50-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //