Array 1 44153-43466 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JMHW01000099.1 Bacillus thuringiensis serovar kurstaki str. HD-1 btkhd1_26, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	================================	===================================	==================
     44152	    32	 100.0	    34	................................	ACAAGATACGAGAATTTAATGACGTCACCCACAT 	
     44086	    32	 100.0	    34	................................	TATTGTTACACCTTTAGAGTATCCGAGTAAAAAA 	
     44020	    32	 100.0	    35	................................	ACAATGGGAAAGTGTTAGGTTATGCACGTTTTAAA	
     43953	    32	  96.9	    32	.......................A........	GAAGATAGTAGAAGAAATCAAAAAAAGTGTAT   	
     43889	    32	  87.5	    33	.........T.A.......T...A........	TTTGTTGCTCCAGTCGTTATGATCGTCTTTGCA  	
     43824	    32	  93.8	    33	.......T.T......................	TAGGAGTTATTAATGGCTTTAGATGTTAGACCA  	
     43759	    32	  90.6	    34	.........T.........T.A..........	TACCTCGGGTTTATATTTATCTGGAATGCCCATA 	
     43693	    32	  93.8	    33	........CT......................	TTTGCAACTAGCTCAATTGTTTTTCCGTTTTCA  	
     43628	    32	  96.9	    34	....................A...........	TACCTCGGGTTTATATTTATCTGGAACGCTCATA 	
     43562	    32	  90.6	    33	.........T.A.......T............	ATAATATCACAATTTTGACAAAATTCAGTCATG  	
     43497	    32	  90.6	     0	A.T.................T...........	|                                  	
==========	======	======	======	================================	===================================	==================
        11	    32	  94.6	    34	GTCGCACCTCATATAGGTGCGTGGATTGAAAT	                                   	       

# Left flank :   ATTGAAAATGGAGAAACAGAGAATTTATATCCAGGGATTAATAAACAAGGAATAAGAACATTTTACACGAAACATTCTACAGATGTTGAGAATGAGGTTGCTACTGCGATTCATGTGTACGTTGATGTATTAAAACAAATGAAGCGTGAAGGTGCTGAATTAGCAAGGAAGAAGTAGAACGATGTGATTAGAAGATTTAATAAATAAAATTCTTCATCATATTATAAAACTATACATTCTTGTTTATTAGTTAGCTAATAGCTATGAAAATAAAATTAAATATATCGGTGTACAAGAATGAATTGATTTAGAAAGTCCTTTGATTTTTTAGGTGCGAATGTATAGCAAACATGAAATTCCTAGTACATTCGCACCTAGAATTCTCATAATGTATGATGGGGATTTATGATTTTTATACAAAATACTTTAATAAATAAAAATATTTTTATATTTTTGAATAGAATTAACGTATTTGTGATTGATTTTGAGCACAAATCGGT
# Right flank :  AGTTTAGTAGATACTCAACTAGAAGTATCTATATCTGCAGTATCTAATACAAAAGTAAACAGTATAAAATGGAGGGAGATTGAATGACCTACATTGCTCATATACGCGAGAGTGACAGTCAAGTACAAACAGTCGAAGAGCATTTATTAAGAGTAAAAGAACTAGCTGAAACCTATGGAGAAAAAATTGGTATAAAACATTTAGCTGGTTTAGCCGGTATGCTCCATGATATGGGGAAATACACCAATGAGTTTAAAGAATATATATTGGAAGCAGTAAATAATCCTAATTCTCCACCTAAAAAGGGGAGTGTTGACCATTCAACTGCAGGGGGGAAATTGTTATATCAATTATTCCATACAGAAAATATGATTCCTTACAAAGGGATAATATCTGAGATAGTGGGAAATGCTATTATTTCTCACCACGGATACCTTCAAGATTTTTTAAATCCAGATTTAGAATCGCCCTATTTAAATAGAGTGCGAGATAAGCAATTA

# Questionable array : NO	 Score: 8.44
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.73, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.45,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCACCTCATATAGGTGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.12%AT]
# 	Reference repeat match prediction:         R [matched GTCGCACCTCATATAGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-2.50,-2.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [9-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [71.7-76.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,9.41   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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