Array 1 44681-43432 **** Predicted by CRISPRDetect 2.4 *** >NZ_NKUD01000009.1 Komagataeibacter hansenii strain LMG 23726 NODE_9_length_126982_cov_81.3527_ID_4253, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 44680 29 100.0 32 ............................. GTTTCTACGGACCAAGTGGGCTTTTGGCATTC 44619 29 100.0 32 ............................. ATGGCGTGATGCGGAATATCCGCCCCAATCAC 44558 29 100.0 32 ............................. ATTTCCGCCTGGATTTCTCCGAGCGCATAAGG 44497 29 100.0 32 ............................. GGCGCAACCGCGATGGACGCGGCCACGCTGAC 44436 29 100.0 32 ............................. ACGGCGCTGGAGATTTACGGCGACTTCCTCGC 44375 29 100.0 32 ............................. GGGCAGATTCCCTACAACACGCAGGGTGATAG 44314 29 100.0 32 ............................. GCTGTCGTAAACTCGGACGGCACTGTCACTGA 44253 29 100.0 32 ............................. GATTTCCTTATCACGGAAATGGATGCCTTTTC 44192 29 100.0 32 ............................. AGGATATCCACACCCATCATCTTCATAAGTGT 44131 29 100.0 32 ............................. CTATCGGTGGCGATAATCTTCCAGTCTGTTTC 44070 29 100.0 32 ............................. AAATACCCACGACCGCTATAATCAACGTCGCA 44009 29 100.0 32 ............................. GTGCCCGTTATGGTTAGTCCATGTCTTAACCC 43948 29 96.6 32 ............................T TGGTCATGTCGCCGCCCTGCACCGCCCAGACA 43887 29 100.0 32 ............................. ACGAGATCGTTTAGTAGGTTTGAGGGTAGGAA 43826 29 100.0 32 ............................. ACCAGGCCAAGATCGTGTTCAACAAGGCCACG 43765 29 100.0 32 ............................. GCTGCTGCCGCCGCTGCTGCGTTCACCAGTGA 43704 29 100.0 32 ............................. ATGCTCGCCGCCAAGGAATACCTTGAGGTGAA 43643 29 96.6 32 .......T..................... AATTCCAGCGCACCCTGAATGCGATTGTCACA 43582 29 100.0 32 ............................. CGCAAGTCCGCCAGCAGTCATAGCCGGTTCCA 43521 29 100.0 32 ............................. GCGCCTGCCAACATCTGCAATATATCCCGGCA 43460 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 21 29 99.7 32 GTGTTCCCCGCATACGCGGGGATGAACCG # Left flank : ATGTGCTGGCTGCGGGCGGGATGGAGGTTCCGTCAGCACAGGAAGAAGCCATGCCAATTGCGTTCATGGATCGTAAAGGGCTGGGTGATGCTGGTCATCGTGGTTGAAAATGCCCCGCCACGTCTGCGTGGGCGTCTGGCTGTATGGCTGCTGGAGGTACGTGCAGGTGTCTATATCGGCAGTTACGGGCGACGCGTGCGTGAAATGATATGGGGACAGGTATGTGCCTATATAGATACGGGAAATGCCGTGATCGCTTGGGCCACGCCCAATGATGCTGGTTTCGAATTCGACACCTGTGGGAAAAACCGTCGTATCCCGGTCGATCTGGATGGACTGCGTCTGGTGTCTTTTGGCCCAGAAGCCGCGTTGCCGGCGCATCCCGGCCCGACTGTCAGGTCACTTTCATCCCGATCTGGAAAGGGATAAATACAGAGGTTAAAGTTGGTAGATTCTTTGACAATAAAATAACCGTTTAAAATCAAGTGGTTCCACGAAGA # Right flank : TCGAACACGAGATCCCCCAACCCGACCTCGCGGTGTTCCCCGCATGCCCTGTGCCATCGCCTGTGTTTGCGCAGCATGGCAGGAGGCTGATGTTTTCCGACTCTGCGATCATCGGATGTTACAAAAAAACTGTTTCATGAGTCGCGCGGCGAAAGTCCTGCCCTTCGTGGGGGTATTCACACGCTCTGGATAAAATTTCTCCGTGCATGACACCATATCTGGTGTCATGATTACCTTCTTTCCACTAAATGCGCGAACCGGTGTCCTCGCATGGCCCTCGTTCGCCTGCACGAGGGAGCCAGTGCATGGACGGAGGTTTTTCGCTGTTTGGCGGCGCGCGTGCGCAGATACGTGATCCCTTCGAAGGGGCATTCGGCCTATCCCCGCTGCCTGCCCGTTCGCTGGATCGTGGGATGGGGGCGGCTGTGGGGCGGCGGACCGTGTTCCGCCCCACCGATCACGAGGATTTCGGCCATGTGGCCGCGCGTGTGGCGCGGGGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCATACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCATGCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 54182-53970 **** Predicted by CRISPRDetect 2.4 *** >NZ_NKUD01000009.1 Komagataeibacter hansenii strain LMG 23726 NODE_9_length_126982_cov_81.3527_ID_4253, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 54181 29 100.0 32 ............................. GATTGCGCCGGTCATCTGCCGTGATGAGGTCA 54120 29 100.0 32 ............................. ACGCCAAGAAGTATGGAGGCAAGTATGGCGCT 54059 29 100.0 32 ............................. GCCTGCTGACCAGCCGATAGCTGCTCCTGCCG 53998 29 79.3 0 .............A..........TCAGC | ========== ====== ====== ====== ============================= ================================ ================== 4 29 94.8 32 GTGTTCCCCGCACGCGCGGGGATGAACCG # Left flank : TATGCTGCAGATCATAGGGTTGCGTTTTGCCCCTTGGGCGAACTCTCCCAATCAGAGGTTTCCAGATCGCACATGTCTCGTCCACAAAAGCGTCTGTTCTGTTCACTTCTCCCAATCAAATAAAATATAAATAATTCAATATATAACATGGTGAAATAAATGATATTTTATTGTTTGTTATGAAATTTATTAATTTTATTAAAATAATTACTATATTTATATTGTATTAATATGCATGATTTCACTTTTAATATTTATAGATCGGATTTTGTTGTTGGGGCGCGCTTTGCTCGGCATGTTTTTATGGAGTGTGCAGACTATCATTCAATGGCTTTGAGGCAGCATCATCAATGACCGCTTGTTTTCTCAGAATATGACCGTTTGAACCGCGGCCTTGTAGCTTTCGCAGAGGAAGAAAAAAAGCTAATAATTTAGGGTGTTTCACACGGTGGAATTTTGACAATAAAATAAATATTTAAAATCAATGGGTTCCAGGAAGA # Right flank : AGATGATATTGTAAATAGATATTTGATGCGTTGGTTGAAAGGCTGTTCTGCTTTTTTCTAAACTTACAAATCCAAGTATGTTGGGTATGGTTTTTTTGCAAAACCTGTCGAGTGCATAAAAAGGCGGTGTCATGCTGGATGCAGGCGACGATATGCTGAAGTTTTTTTGGGGTAAGGCTCAATCAGGCGATGGAAAAAAGCCGGGAGAGCCTGATTATCATCCGCTTGTCGCCCACATGCTGGATGTCGCCGCCGTAGCTGTTCTCTTGCCGGGGAACGTGCATACGGGGCTGGATCGTCGGCAGCTTGGTTTACTGGTGGCGTTACATGATATTGGTAAAATAATGCCTGCGTTTCAGGCAAAGGTGCCGGCGTGTTGGCCGCACCAGGCACTTGGCCCGTATGCTGATGCGGTAACGCTCTCGTGCCATGATGTCGATGGCCTGCTGCTTCTTGATTATGTCTGCGAAGATGTGCTGGCGCCGCTCTTTGGTGTGGAT # Questionable array : NO Score: 5.60 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCTCGCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //