Array 1 1755632-1754938 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CH902578.1 Maritimibacter alkaliphilus HTCC2654 1099457000270, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   1755631	    36	  88.9	    29	..G....T.AC.........................	CAGACCCGCGCACATAACCGCCTTTCTGG 	A,A [1755618,1755626]
   1755564	    36	 100.0	    29	....................................	CTTGGGCATCGTGTCAGGTGTTCTCTGGT 	
   1755499	    36	 100.0	    30	....................................	CTGCTAACATGTCTCTCACTCCTGCTGTGG	
   1755433	    36	 100.0	    30	....................................	GTTGAACTGGCTATCCCTATCAACTGGCCG	
   1755367	    36	 100.0	    30	....................................	CGCAACTCAGGACGAGGTGCGGCAGCAACT	
   1755301	    36	 100.0	    30	....................................	TTTTATTCGTGGGGCTGGCTCGCCTCACCA	
   1755235	    36	 100.0	    30	....................................	CACCCATCGCTCGTCTCCTTCTCTGGTGTG	
   1755169	    36	 100.0	    29	....................................	GCCGTCAATGTCAATCGTTTGACCCGGCG 	
   1755104	    36	 100.0	    29	....................................	ACCACGACGCGAATGTGTGGCGAAGGTCA 	
   1755039	    36	 100.0	    30	....................................	GCCCCTCCTGATCCATGGGCGTAGCAAGTT	
   1754973	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        11	    36	  99.0	    30	GTTGCGGCTGGACCTCGAATTCTGAACTGCTACGCT	                              	       

# Left flank :   GTCCTCATTTTCACGCTTTTCCATGATGTCACTTCCCGAAGATAGTGCGGATGCTCGCCTGTGAGCGCGCGGTGAGCCTCGGGTCTGTATGTCCAGAGGCGGCACGGATTTCACGCAACCACGCCTGTTCGTTCGCCGTCACGGGGTCGCCGAACACCTCGATGAGCGTGGCCGCCGCCGTGCCGCCGATCGCCTGTTCGAGCGCGAGACGCATGAGGTAGGCCGCATCGCATTCGAGAGCCCCAGCGAGCGCCGGGATGCGATCAAGTGCGACCTTTGAGCGGCCCTGCTTGATCATCGTGATCATGTTCTGGTTCACGTATCCAGCCTGTGCCGCGATGTCGGCCTGCGTCTTCTTGGATTTCAGTTCGAGAACCCGGCGCTCGACAAATTTTGCAAGTTGGGTGTGCTCGTGCGGTTTCGTGGTCATGTTCTTCCTCGCTGATATCGCGCAGCGTGTGCTGCATGTCTTCTTTATAGCGAGGGGTCGTTGGGGAACT
# Right flank :  TGATACCCTCTCAAGATCCTGTAATCGCAGGGTTTTGGGAGGGTGCTAAGATACATTTTCCTTACCCTTCGGTCAAAACAACACCAACTGCTCAGGATTTTTGCGGGCACGTCTTCGACCCTGATCCGAAAAGTGAACTATGTCACGATACTGGCGGTCCGTGAAATTCAGGATTTGGACATCGCCATTATCGGGTAAGTTTCTTGCTATACGACTGACGCGTGTCTGGAACGCTTCCTTCCCATTTACGAACCGCGCGTAGACAGAGAACTGGCTTCGCTCGAACCCCTAGTCCAAGAGAAAATTTCGGAACCCCGTTGCTGCTTTTCGCTGCGGTTTTGTGTCCGTGGGGAGATCAAACATTACCAGTATCCACATGATCCTATACCCCGATAAATGAGTTTGTGTTTCGGTCACAATCCCGCGCTCCTTAAAGTGAGCGCATCCGGCGGCGCGGGTAACAACAAAGACAGCTTGCCCGCTTCAAAACTCTGGCCAAG

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGCGGCTGGACCTCGAATTCTGAACTGCTACGCT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [10,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTGCGGCTGGACCTCGAATTCTGAACAGCTAAACT with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.90,-0.80] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [55.0-46.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.78,4.5   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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