Array 1 1205613-1205965 **** Predicted by CRISPRDetect 2.4 *** >NZ_PYGD01000001.1 Taibaiella chishuiensis strain CGMCC 1.12700 Ga0171613_101, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== =========================================== ================== 1205613 38 100.0 43 ...................................... GGCTTACTTTTGGTGCTTGATGCTTTGCACGCTAATACGGCCG 1205694 38 100.0 36 ...................................... GGGCTCCCTTTGGTACGTACCACGCTGATGAAGCCA 1205768 38 92.1 43 ......C.G....C........................ GGCTTACTTTTGGTGCTTAATGCTTTGCACGCTAATACGGCCA 1205849 36 92.1 43 .....................A.--............. ATACTCCTTCTGATACTTGATACTTTTCACGCTATTAAAGCCA 1205928 38 100.0 0 ...................................... | ========== ====== ====== ====== ====================================== =========================================== ================== 5 38 96.8 42 GCTAACGGATGAGATCCTTCGCTGCGCTCAGGATGACA # Left flank : AGGAGAACGCAGCGTGGAGCGGAAGCTGGTTGATTTTATCGAACACGGCACCATCGACGAGCAGAACAAAAGCGCCAATTGGATATCCTTCGACCACCTGCAGTTCGAAACCGGTAAGTCCGACCTGAAACCCTCTTCAGAAGCGCAGTTGGGTAATGTGGTCGCTATCCTGAAAGCCTATCCTGCAGTAGCCCTTAAACTGGGCGGCTATACCGATAATACCGGCGATGCCGCTGCCAACCTCAAATTAAGCAAAGAGCGTGCAGAACATGTAAAAAGCCGGCTCACAGCAATGGGTGTCGATGCTGCACGTCTTGAAGCCGATGGTTATGGACAGGAGTTCCCGGTAGGCGATAACACGACTGCTACCGGCCGTGCACAGAACCGCCGGATCGATGTGAAAGTAGGAAAGAAATAGGCATGTATTGCCGGCAAGAGCCCCGTCCTGCTAAGCTTAGCAGGACGGGGCTCTTGCTTATGTGGTCCCTCCATTAAAGCCA # Right flank : ATCTAACATCTAACATCTAACATCTAAAACCTAACCGCTATCTTTGCTGCCGACAGATCGTACATGAAACTACTTCTTATCCGTTTTTCTTCTATCGGCGATATCGTGCTGACCACGCCCGTACTGCGTTGCATACGCCGGCAATATCCCGACGCCGAAATTCATTTCCTGGTCAAACAATCGTTCAAGGCAGTAGTGGCGCACAATCCCCATATCGATGTGATCCATACCCTGGATAAAGACCTTAATGCCAATATAGAAACGCTGAAGAAGATTGGGTTTGATTACGTGATCGACCTGCACCGCAACCTGCGTACCATGCGGGTAAAACGCGCCATCGATGCGCCTGCGCTTACTTTCGACAAGCTCAACTTCCGGAAATGGCTTTACGTAAATTTCAAATGGAACGTAATGCCCGATAAAAGCATTGTAGACCGCTATTTCGAAGGCATGCGGCCACTCAAACTGCAAAACGACGGACAAGGCCTGGATTATTTTAT # Questionable array : NO Score: 2.70 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTAACGGATGAGATCCTTCGCTGCGCTCAGGATGACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA // Array 1 238010-237670 **** Predicted by CRISPRDetect 2.4 *** >NZ_PYGD01000006.1 Taibaiella chishuiensis strain CGMCC 1.12700 Ga0171613_106, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================================= ================== 238009 32 100.0 48 ................................ CCCTAGCTGGCTTTACCAACGTGCCAAGCACAAGTACCCAAGGGTTCA 237929 32 93.8 41 ....................G..........T TTTTAGTATCAGGTATCAAGTAATAAGTATCAAGAGGACGA 237856 32 100.0 42 ................................ AGTAAGCCGGCTTTACCAGCGTGTCAATCATCAAGAGGACGA 237782 32 93.8 49 ..............AT................ CCCTAGCCGGCTTCACCAGGCATGTCAAGCACAAGCACCTAAGGGCTCG 237701 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ================================================= ================== 5 32 97.5 45 TTGTCATCCTGAGCGCAGCGAAGGATCTCATC # Left flank : CTGAAATTCGTGGAGCAGCCGTTCCATGTCCCTTTCCAGTATCCTGCATTGTTGCAACAGCGCGTCTCCGGCCTGTGCCGGTGCGGCGAGCCTGGGGATCAGGGTATTGATCTCATGCCGCAACAGGTCTATAACCTGGTCCTTTTCGACGAAGTGTTGTTGGAAGCGTTCTGCCAGGTCTATAAATTCAGGGCTTACAGGGCCGCTGATCCTTAGTGAAAGCTGATCCTTCAAACGGATATTCTCCGTCTTCAGCTCATGAAGGGTTGCCAGCCATTTTTTGCTTTCCGCTGTGTAAGCGCCGCTGCCCGGTAGGAGTTCTTGTTTCATGTTGCGTAATCTTCAAAAGTAGCTGTTGTTGGCCGCGGCAACAATAACGCCGGTCATGGGCAGCTATGACAGGGATCATTATTGGCAGGCGGTATTGGGTATTGGGTATTGGGTATTGGGTATTGGGTATTGAGATGTTAGGTATGAGATATTAGATAATTAAAGGGTTG # Right flank : GGTAAGCCGGCTTTATCGGCGTTACCGCACCTCCCGGTACAATTTCCCGAAACGCTCGTGGTACGCCTGTTCCAGGGCCTCGCGATGATCGGGATGGGCAATGCTGATCAGCAGCCGCGCCCGTTGGTCCATATTACGGCCATACAGGTTGACCACACCATATTCAGTAACCACATAATGCACATGCCCCCTGGTGGTAACCACCCCGGCGCCTTGTTTCAGGAAAGGGACGATACGGGATATGCCTTTCTTCGTGGTAGAAGGCATGGCGATAATCGGTTTACCACCTTCCGACAGCGAAGCGCCCCGCATAAAGTCCATCTGCCCGCCGATGCCCGAATATTGATAAATGCCGATCGAATCGGCGCAAATCTGCCCGGTAAGGTCGATCTCGATCGCGCTGTTGATCGCAATTACCTTTGGATTCCTGCGGATAATATCGCTGTCGTTGACAAAAGCCACATCCATACAGCTTACATAAGGGTTGTCGTGTACGAAGT # Questionable array : NO Score: 2.71 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:-0.02, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGTCATCCTGAGCGCAGCGAAGGATCTCATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.00,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [2-2] Score: 0/0.41 # AT richness analysis in flanks prediction: R [41.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA //