Array 1 133411-137321 **** Predicted by CRISPRDetect 2.4 *** >NZ_PPUD01000006.1 Eggerthella lenta strain DSM 11767 NODE_6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 133411 33 100.0 34 ................................. ACGCGCACGGTGTCCCCGGCTTCGGTGTACAGAT 133478 33 100.0 34 ................................. CGAAACGATCGACGTAAGTACGGCTGTTGAGCGT 133545 33 100.0 34 ................................. TTCACCTGCCATTGCAAGTTGAAGCCCGACCACC 133612 33 100.0 32 ................................. ATTACCGCATGGGCTAGGTACAAGACCATCAA 133677 33 100.0 33 ................................. TCGAACATGACGTGCGGGATGCCGATCAACCGG 133743 33 100.0 34 ................................. ACCTTACCGCCGTGCTGCACGACGGGAACGCCGT 133810 33 100.0 33 ................................. ACGTCGAGCAGGTCTTTGGACGTGTCGCTGTAG 133876 33 100.0 33 ................................. ACGCCGATGGAGCGGAACAGCCCGCAGGTGAGA 133942 33 100.0 33 ................................. ACGATCAGCCCGCCGTCTATCCGATGGCGCAGC 134008 33 100.0 33 ................................. CAGATGTCGCCGTTCATGGGCGCTTCAAGATCG 134074 33 100.0 33 ................................. CTCATAGTATGCGGGGCGCTGATGCGCGCCCCG 134140 33 100.0 33 ................................. CTCATTGGTGATCTCAATTCCAACCGGCACGAA 134206 33 100.0 34 ................................. CAAAACCGAGAGGATGCTCATATCCGACGGCCGC 134273 33 100.0 33 ................................. AGGCCCTTAAAGCCCGCAATTACGACCTGTTGA 134339 33 100.0 34 ................................. ACCTTGTAAAAGCCGTCGATGCGCGCGTACTCGG 134406 33 100.0 35 ................................. TCATATTCATAGATGTTCTCTGGCAGTCCAGGGAG 134474 33 100.0 33 ................................. CACATAGTCACGCCATAATCATCGCGCGAGAGC 134540 33 100.0 33 ................................. TACTTAGTGTGTTATATGCGCCGCAAATACTAT 134606 33 100.0 34 ................................. GGATACGCTCTCATGCATGCATACCCTGTGGCCG 134673 33 100.0 35 ................................. TTGTTGTCGCCGTTCCTCGCGGCAGCCACCTCGGC 134741 33 100.0 33 ................................. CGATGCCGACCACGACGATAGCGCCCATGATGG 134807 33 100.0 32 ................................. GGGCTGACGACCCAAAGAAAAGTCAGCGCCGC 134872 33 100.0 34 ................................. TACTATGTTTACAGTACCGAGGAGCTGAGGCCGC 134939 33 100.0 34 ................................. TACTATGTTTACAGTACCGAGGAGCTGAGGCCGT 135006 33 100.0 37 ................................. TTGCCGACGTGCTGGACGGCTACAACCGCACCCACGA 135076 33 100.0 33 ................................. AGCCTCTTTTCGCTCGTCGCGTTCGTCGAGCTG 135142 33 100.0 33 ................................. TAAACGAACTTGAACAGACGCATTTTGATAACC 135208 33 100.0 32 ................................. GAGTTCGTTACCGACACGATCGGCCTCATCGG 135273 33 100.0 34 ................................. GAGCTCGCCTGTGTACCCGTCGTTGGTGACGATG 135340 33 100.0 34 ................................. ACGTTGCCCGGATCGAGCTTGAGCGCGCGCTCGA 135407 33 100.0 35 ................................. TCGACGACGGCCCTCACGTCGTCGATGGTGCGGCC 135475 33 100.0 34 ................................. TATCACATGGAGCGGACGAGGTTCTCCGCGCGAG 135542 33 100.0 34 ................................. ATGGCGAGTACTTGGACGTAGTTGACGGTCGCCG 135609 33 100.0 36 ................................. ACGTATACGGGCTTCGCGCCGGTGCCGTTGACGTCC 135678 33 100.0 33 ................................. GACAACGCGATGGCCAAGGTATCGACCATCGCG 135744 33 100.0 33 ................................. GATCCGCTACGACAACGTAGGGGATCAGGCCGA 135810 33 100.0 36 ................................. AATGAATCGATCAAGCGCGCCAACGGCGAACTCACC 135879 33 100.0 34 ................................. GAAACCGTGCGCGACGGCGGAAGCAAGCTGGACG 135946 33 100.0 33 ................................. GGAGAAACATATAAAAAGGACGGTGTAATCTCG 136012 33 100.0 35 ................................. CAGTTGATGTCTTTTCGCAGGTCGATGGCGCACGC 136080 33 100.0 34 ................................. AAGCCGACGAATACGCCGGCGAACGCCATTCAGC 136147 33 100.0 34 ................................. AGGCCCTGTCGGCCCGGTCGGCCCTGTCGGCCCC 136214 33 100.0 34 ................................. ATGTCGGCCTTGGTGAACTCGGACAGGTCGAAGC 136281 33 100.0 33 ................................. ATGCTACTAGACGATTTTTTTGTTCCGAAATTG 136347 33 100.0 32 ................................. GGGCTGACGACCCAAAGAAAAGTCAGCGCCGC 136412 33 100.0 34 ................................. TACTATGTTTACAGTACCGAGGAGCTGAGGCCGT 136479 33 100.0 33 ................................. AGCCTCTTTTCGCTCGTCGCGTTCGTCGAGCTG 136545 33 100.0 33 ................................. TAAACGAACTTGAACAGACGCATTTTGATAACC 136611 33 100.0 33 ................................. TGGCAGCCTCTCGCAGGGTCTCGGCTGGCTCAA 136677 33 100.0 37 ................................. GAAAAGCTGCACCGGCGTGCCGACCGTGATGCCGTTA 136747 33 100.0 36 ................................. GGCACTGACGTGAACGAAAGCGTCAAGGCTGCAAAC 136816 33 100.0 33 ................................. CCCACCGCGATCACCCAGAACGTCGAGTACCTG 136882 33 97.0 33 .............C................... ATGTCGGGGAAAAGGCGCGAACCCATGTAGGCG 136948 33 100.0 38 ................................. CAGGTAGGCGTTGACGGCCTTGTCGTTGGCCTCGGCCA 137019 33 97.0 33 ..T.............................. CTACGATGCCATGGCGTCCTATGCATTCACGGG 137085 33 97.0 34 ......T.......................... GAGGAATATACGCGATTCGTTGAAACGGATGTAG 137152 33 90.9 36 A.....T...................G...... GGCACCGCGGTGTACTCCGTGCTCGAGAACGCGCGG 137221 32 93.9 34 ..............-.................C TGTTCGGGTTGGCTGGCAAGCTGAACGCTGACAC 137287 33 75.8 0 .....GTT.A..T.....C.C..........G. | T,C [137291,137303] ========== ====== ====== ====== ================================= ====================================== ================== 59 33 99.2 34 GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Left flank : GCGCGGCGATCTAGACGGCTACCCGCCGTTTCTATGGAAGTGAGATGGTTGGCATGCTGACAGTGATTACCTACGACGTGAATACCGAGGATCCGGCAGGCCGACGTCGCTTGCGAAAAGTGGCGCGACATTGCGTCAATTACGGTCAGCGTGTCCAGAACTCAGTGTTCGAATGCGTTGCCGATGCTGCGACGATGGTTCGTATCAAGAGCGAGCTCGTCGAGCTGATCGATCCGGAGAAAGATAGTTTGCGATTCTACAGTCTTGGAAGCAAATATGAGACGAAGATTGAGCATGTAGGTGCGAAGCCAACGTACGAAGCTGAAGGGTTCTTGGCATTGTAGGACCATGGTGCGAGCACGAAGCTCGCATATGACATACGTGAGGTTCGCACCAAATAGTGTGACATAAAGATGCCTGACGCGCTTGTTGCGTGTACCTTGTTTGTCTATTGGCGCTATATGTTGATCGAGGCAGTAAATTTTGCGCATAATATTGCG # Right flank : TCGCGCGCAGCTGTCGTGGTACGGCCGAGGCGTGGTCGGTCGTACCACTCGCGGGCGCGCGGGTAGAAGCAGGGTATCCGGGTTGAAATCGAGCAGCGTTTCGGCAGGTTCTGTCGCTCCCTAACGAAGGGGCGACCGATCCTTGCCGTCGCTTCCTATCGAGAACGCGGATTGATTCGCTGATTCCGAGTTTTGCTCGTCGGACGTCTGCGCCGAGTTGCGAAAGGCGCAGACGTCCTTCGGATCGCTACTCCACCACCAAATCAACGAACTCAAACGTCGTGCAGTCAACCAGGCCGCGGTTCGTCAGGCGCAGTTCGGGCAGGCATGCTAGCGGGATCAGGGCCATCGTCATGAACGGCGACGGCATGGTGCAGCCGATCTCGGCCCATGCGCCCTCCAAAGCATGTACCTTCTCGCTCATCGTTACGGCGTCGAGCGAGTCCATCAAACCGGCGATAGGAAGCTCCACCAACCCCAGGATCTCCCCGTCGGCGACC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.10,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //