Array 1 21053-19745 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMKV010000026.1 Methylobacter sp. BlB1 NODE_26_length_57706_cov_496.995577, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================================================================================================================================== ================== 21052 29 100.0 32 ............................. ATTAGACCCGGAAAGAACACTGGTTAAAACGG 20991 29 100.0 32 ............................. CGCCAGTTTAGACGGGGCAGGGGAAAGCCCAG 20930 29 100.0 32 ............................. AATATGGAGTATGGTCTGGCATGATAAGGCGA 20869 29 100.0 32 ............................. GCGAGCGCACGTCTATTCTGAAAAATAAAGAG 20808 29 100.0 32 ............................. TTCCGCTATCAGGCCGTGCATAGGCGGGAAAT 20747 29 100.0 32 ............................. TATTGGTGAATAAATGGCGAGAGAAAAAGTTA 20686 29 100.0 32 ............................. CCCCCAACAATAATAACTTCAATAGATTTGCA 20625 29 100.0 32 ............................. AACACGCATTATGCGGTCTAGCGTTTGATGCT 20564 29 96.6 32 ............................T ACATGGGGGGGATGGTGCCCTTGGCCGCATGC 20503 29 100.0 32 ............................. GATTTAGTATTGACAGGATTAACAATGAAAAC 20442 29 100.0 32 ............................. GCAGATCAGCACAACTCATGGGAATCTCTGGA 20381 29 100.0 32 ............................. ACCGCACAGTCTCATTCAGATCAATGCCGAAT 20320 29 100.0 32 ............................. CACTGATGACCAGCCGAACAGTGATAATAGAT 20259 29 100.0 32 ............................. GCGCTTTCTGTTGGTCGAAGCGACGGATGAAG 20198 29 100.0 32 ............................. GTCACTTCAGAACCCGGTTAGACATTGATCCC 20137 29 100.0 32 ............................. AACTATTCCGTGCGCGACCTGGCTGAGTTTTT 20076 29 96.6 32 .........................T... CAATCGATAACTATGCTGTTGGCGATGCCGAG 20015 28 79.3 154 ..............A-........TGTT. GTGAGGTAAATAAACTGGCCATTATCCTGCGCCTTCTTGCATCAATAAAGATAGACCGCCGGTTTAATTGTTCTTTAATCACACTTGATTAAAATGCTCAGCTAGTCCATGAGATAGAATCGGTGCATTTTGATGGTTTGATTTCCCGTGGACA 19833 28 82.8 32 T..C.......C.-.T............. TAGAAACACCTGAAACGCCAGGTGAGCGGAAT 19773 29 82.8 0 ...........ACC.........A..T.. | ========== ====== ====== ====== ============================= ========================================================================================================================================================== ================== 20 29 96.9 38 CTGTTCCCCACGAGCGTGGGGATGAACCG # Left flank : AAAATCATTCCTACCATCGAAGAGGTGCTTGCGGCCGGCGAGCTGGAACTGCCGAAACCGGCCGAGGAATCGATCGCGCCTGCCATTCCTAATCCTGAGAGTATCGGTGATGTTGGTCATCGTAGTTGAAAACGTGCCGCCGCGGCTGCGGGGGAGGCTGGCCGTCTGGCTGATCGAAATCCGCGCCGGCGTTTATGTCGGCGATTTATCGGTCAAGGTCAGGGAGATGATCTGGTCGCAGATTGATGAAGGCATTGAAGAAGGCAATGCCGTCATGGTCTGGAGCACCAATACCGAATCCGGCTTCGATTTCATGACCCTGGGCAAAAACCGCCGTCTGCCGGTTGAGCTCGACGGCCTCAAACTGGTCTCTTTTTATCCTGTTGAAGGTCAAGAGGATGAAAATGCTCTTTAACAATTTAACGATAAAATATCATCTTTTCATTGGTGGAAAATTGGAAGGGATTATTTCTCTTTATTAACAATATGTTAAGATAAGT # Right flank : AATAAAAAGGCTTGGCTGCAGACTTGGAAATGCATTTTCTTCACTTGTAGCAATAAGCTGTTCTCTGAAGCTTAGTCTGGATAGTCATGAAATCCCGAAATTCATGAAGAAGTGTGTTCAAGCAATTGAATTTACAACCTTTCATATATTCGGTGTATTTCGTGGCGAAATATTCAGGCTAAGATATTCGAACTTTTCAAGAGTTGCTGAATCATTACATTACCTCCTGTACAATACTTAAAATTTTATTAAGCATAAAGCGACAATGTGTGTAAGTTCGCAGAATTGTAACCGATGATTTATCCCAAAGATTTTATTGAAACGGCCGAAGGGCTGATTTTTGCCGTAGTGGCGCAAGAACTGGAGCAAGGTAAGGTGCTGTGCTTTTTGCGTTATGTAAAGGAAGCTACGGGCTGGAAAAAATATGATACTGCCGAAGCGAATGCCTTGTTGAAGGGGCAGCATCCCGATTATCTGCACTATTCCAGTGTCCTGGATGC # Questionable array : NO Score: 5.52 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.58, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCACGAGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 3489-3883 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMKV010000059.1 Methylobacter sp. BlB1 NODE_59_length_28010_cov_634.917117, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3489 28 96.4 33 ...................A........ TGTCGCCAAAGAACTCATTGAGCCATACAACAA 3550 28 100.0 33 ............................ CACCGCAGCTCATACTCATAGCGCCGAGCCAGG 3611 28 100.0 33 ............................ CTCATCCATAAAGATCGGTATGCGGCGGCCATC 3672 28 100.0 33 ............................ CAGTTTCAGATCATCCGCTTTAGTTTGGCGATC 3733 28 82.1 33 A.........C..TTG............ TCCGCTCGGCATCTACGTCAAGCAGTTTACCTG C [3744] 3795 28 92.9 33 ...........A.G.............. TAAGGCGCTTTGGACGTTGGCGGAGGAAATGCG 3856 28 82.1 0 ...........AAG........G...C. | ========== ====== ====== ====== ============================ ================================= ================== 7 28 93.4 33 GTCTTCCCCATGCACATGGGGGTGTTTC # Left flank : GGCTTCAATTACATACCTTTTTAAAAACTTATCGTAGCGAATGTTATCGGGACACATCGCCTGATAAAGCGTTAAATCCTTCGATGCTTGTACTCGGCTGATGCCGAAATTATCCATTAAGGCATTAGTGGACACGCTCCCGCTCCAGAATACTGTCGTCTCCAGCAACGTTAAGCGTTGCCGTTGTTCCCATTTTAAATCCTGTTGCAAAAGCTGAGTCATGATGCTAGATTATGTGCATAGTTAGTTTACATATAAATTATTATAACATATAAATCTAGCGCCTTAATTTCATTTTGCAACTAATAGTCTTTGTAGATGAATAGGATAGACTTGTAATAAGGAATCAAACCACGTGTTCAGACGCCAGCTCCCCAGGAATTCTTGCATTGATGCGCTTCAGCTAAATGATTGTTTGGCCAAAACTTATCAGACCTATTCTGGTGAAAAACGGGCCGGACGACACGTTTTAAATCATTGTCAGATTGTCGGCGAGATTG # Right flank : CCACTAACCTATGTTCTGCAGGGAAGATTATTCAATTCATCATCTCTTTGAATTTTCGCTGGTTGCATTTACTTCGACCTGCCGTATGCTCGTGAGTAACCTTACTTTAATAAAAAAAAATGGTGAAATCTTATGCGGAAAATATTAAAGCTTATTTTGATAGCTTTGCTGGCCTGTTTGTCGGCTTGCGCCCAAGTTCAGACTAATAGAGCCCTGGCGCTGGAGCCATTGGCGCCGGGCATCATCATCGCCACCGAACCTGTCGGTCTAGGTTATTATTCGGTTGTGGAAAAAATAGATGGCCGCTGGCAAGTCGTGGACGGGCCGTCCGACCAACCTATCACGCAGCGCGCTAACGACAACCAAGAAATTTTGTTCGTCAATGGACATCTGCGCAGCATTGCTCCAGTTTTTGACAGACGATTGAGCAAGCATCATGCCCATTGCACACCGAGTATCGATGACGATAAATGGTATTGGTTATGCACGAGCTATTTTTC # Questionable array : NO Score: 5.78 # Score Detail : 1:0, 2:3, 3:0, 4:0.67, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCATGCACATGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.20,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 2295-3101 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMKV010000087.1 Methylobacter sp. BlB1 NODE_87_length_13715_cov_655.568082, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 2295 37 100.0 32 ..................................... TTTCCGAAGCATGGAAGCACAAAGACTTTGAA 2364 37 100.0 34 ..................................... GACGCCTAGCGGAGTGGCTAAGTCTTGTTGTATC 2435 37 100.0 35 ..................................... CTTTTTTATAACGCGCTCCCTGACATTGGCTATTG 2507 37 100.0 32 ..................................... GCATTGCCGCTTCGATTTGTTTCTGAATTGCG 2576 37 100.0 32 ..................................... AATTCAGTTATAGCTAACTTGTAATCGTAAAT 2645 37 100.0 31 ..................................... GTATTCAAAATCAAAGTCATCACATAGTGGT 2713 37 100.0 32 ..................................... TATCCATATCAACAGATTTAGTTCTTCTTTTT 2782 37 100.0 34 ..................................... ACGCCTGTTCCTGTCTTACGCAAACTTAGTATGT 2853 37 100.0 35 ..................................... ACTCAACTTCTAGCCCTTCATCGTATGGCGCTAAG 2925 37 97.3 33 ....................................C TCTTTTGGCTCTACTTTTTTAAAATCCTGTTTC 2995 37 89.2 33 .......G.A.......T..................C TTCTTCTCCTATGCTTATTCGTTTTGTTACTGG 3065 37 89.2 0 .................T................ACC | ========== ====== ====== ====== ===================================== =================================== ================== 12 37 98.0 33 GTTTAAAACCGAGACCTCAAAAAGAAGGGATTAAGAT # Left flank : AAATGACAGAAAGCTAACAGCGATTCCGGGTGATGCGGATAAAATTGTTTCGAATAGTTACCATAGATGGCGTCAAAAATGACCGACAAGTGATTTAAAATCGGGATATTAACAATGAGAGATTAAGTATCATCAGCCCCCAATGCGACCGTTATGACTATTGGTATTTTTCTGACAAGCTTGTCAGTGTTGTCAGAATGCGCCTGTATCTGATCGAATGCAGAACCAAACACTTTGTACTGTATAAACTGGACAGCCTGTGCAATCTGGTGGGCGGCTTGCAGGGCAGGGCCATGCTGGCTAGTTTTAACATGTTTGACAAAATATCCGGGTTTGGGCTAAAGAGCTTAAAATAAATCTCTGCTGTCAAACAGAGTTACGTAACCTGCACTATCATTTACAGACTTGACTGACCAGCCAGAGATAACTTTTTAAAAATGAAAAATCTTGTCAACTACCTGTGTAACGTTTTGAAAATAAAAGGAGAAAAATCACGAGCA # Right flank : CGCATCAATTCCTAATAAGACTGTTGTGCCTGCCAGAGCTATGACAAGCTTGTCAATAAAGACCAGCAGCTGTTTCAGTCTTATTATTTTTGCCGATGATTAATCGGCAACTTACGATATTTCCTGTGCCCGGCATTTGTACAAGGCACTGCATGTGTTGAACCCATTGATCCTGACAGGCAGAAACCGGCGTTTGAATATTTTTTGATGTCTGTTGAAAAAACGCAATTGCCAGAAGAGGCCACATGAAAAAGTTGGTCATGCTGAAGCTTGGACCGTTCTTTATTGTTGGCAATGTAAAACACGGTATCAAGAAATTCGCCAGTAAAGAATGCCCAAATTGGCCGACAGTAATCTATAATTGACCTGAAATTGTCAGGTTGACCGAACCAATAACAAGAAGACATCGAGTGATCATTTCTCAACCCGTTATTCCCATTAAAACCTACCGGTTTTATTTCGCTACCGATGGTGTAGCCCGCTTGCCCAATTTCCCCGGT # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAAACCGAGACCTCAAAAAGAAGGGATTAAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.60,-2.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //