Array 1 53820-53612 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJAWC010000018.1 Acinetobacter baumannii strain KZ-1093 NODE_18_length_82739_cov_225.716203, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 53819 28 100.0 32 ............................ TGTGATTTCCTCAAATTGAGTTAATGAGATAG 53759 28 100.0 32 ............................ AATCTCATTATCAATCATGCTAATAATGCCCT 53699 28 100.0 32 ............................ AATGCAGACAAAGCGTTAGGTGAGCGCATTGA 53639 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 4 28 100.0 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : GTGAAGTGTGTCTAATCAACAGGGTTTTCGGTCTCTAAGCACTTTTTAAAGGGAACATCATCGACTCAAATCTCTATTTGCAACAGTGCCCTTTATTATTATGGATAAAATCCACCATTATTTGTGTGGGCGGTCGAGCTCCGCCTGGGCGAAAAAAGCGGCTGCTTTGCGTAGAATTTCATTGGCTCGTTGCAGTTCTTTATTTTCGCGTTCAAGTTGTTTAATGCGTTCTTGGTCTGAAAGCTGCTGTACTTTGACTGGATTCTGTTGATTCAAATGCTTCTGATGCCAGGAACGTAGTGTTTCAGGAGTACAGCCAATCTTAGGAGCAATTGCTGTGATTGCAGCCCAAGTAGAAGGATAATCTTTTTCGGATTCAATCAATAATTGAACCGCTCTTTCTCTGATTTCAGGGGTATATTTTGGTTTTGTCATCGGGACATTCTCTCAAGAAAGTTGGTCTCCGACAAACCCGGTACGGTTCAGTCTGGTGATGCTGG # Right flank : AACTGTAGCAGCTTGCTACATATTTAATTTGTTTCATGGTGATGTATGCAGATCTTAATATGTAAAAGGCGAAGGGTAGATCACCAAAGATTATTGAATTGATATGCTTTTAGTCCTAATAAATTAAGCAATTTTTATCGAATGTTGGTAGAGCTTTTATAATTGATTTTAAAAATGCCCATACTATAAAAAAACAAGAGCACGAGGCTCTTGTTGTTTACTGATTGGAATTAATGGTTATAAGCACTTTCATTGTGGTCAGTTTTATCAAGCCCCACTTGTTCTTGTTCTTCATCTGCACGTAGTGGCATGACTAGACCGACGATTTTGAATAGAATCCAAGACAAGACACCCACATATAAGAAGGTAAATAGAATACTTGCAATTTGAGCAAGGACTTGAGGCACAATCGAAATACCTTCGACATTACCACCCAGTGCAGGAACACAGAAAATACCAGTTAAGATACAGCCGACAATGCCGCCTACGCCGTGTACAGA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 4275-3768 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJAWC010000024.1 Acinetobacter baumannii strain KZ-1093 NODE_24_length_62510_cov_282.312265, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================= ================== 4274 27 75.0 27 T...C.-....A......AG..G..... TTAATGCTTAGCATTGATTGATATGTG 4220 28 85.7 29 ...T.G.............G.......T ATAGGGCAATTCTGATCTTAAGTATTTAT C [4212] 4162 27 78.6 39 ....GC..C.AT...-............ GCCCTATTTTTCATTTTTCCTTCAAAAGTAATTTTGAAA G [4144] 4095 28 85.7 32 C..T......A.C............... CAGCGTTCTGCTTTACCGTTTACATATCGCGG 4035 28 92.9 32 ............CC.............. TTGCTTAGGCAAATGCACTGATTTTAAAGAAG 3975 28 100.0 32 ............................ TATCATGAACATTGTTCCTTGACCCACGGACA 3915 28 96.4 32 .........T.................. ATTCGATAGACTGATTCTATAAGCTTATTTGC 3855 28 96.4 32 ...G........................ TGAGGGTGCCACACATTGGCAGGCTGGAGTGT 3795 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ======================================= ================== 9 28 90.1 32 GTTATTCATCGCATAGATGATTTAGAAA # Left flank : TGCTGCTAAAACTGCGCTAAAGCAATTCAAATGCTCACCTAAATCTACTCTATTTTGAGGATATGGCATGAATGAGCAACCTGTTGTTAGGTTGTGAACTTCATAATCGCCATTTGCTTGAACATTTTGATTGATAATGAATTTAGACATAGTTCTTACTCCTCACAAATAGTAGTGATCGGAGGTAGATCTAGGCCGTGTTGTAGAGTCGAGTATGACAAAAATTTAAAATGTTGTGCTATCATTTGGATAGTCCTTATTTAAGTAGTAATAGCTTTGAAAATGGACAAAAGCAGGTATGAAGTTTGGTCACGGAATACCTGCTTTTTTTTATGCCTTTTCATAAATTAAGATATATTTGTCCAAAATCCTTGTCAAACATTATTTTTATTTAAATAAAATTTTACTATCAATCTTATCTAAGTATTAAGGGTAGTGATTTTTTAAATGAATATTAAGTATTCCTAATTAAGATTTGTTATGATACAACTCTTACATAG # Right flank : ACATTCAAAGAGGCTCATCGAATCCAATCGAATTTTATCATCGCTCAGATGATTCAAAATTTCTCTTTCAAAATTTAAAACGACATGTTTTGTCGTTAAAAGGCCGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAATATTATATTTTTATTACATTCGAACTTTAACAATAAACTATGCATGTCATTCTCATCTCTGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCGATTTTGGATAGCTATGCTATTCGTACAGGACATTCATCTTGGCAAGCACCAATGACAATGGAAGGTTTAAAAGAAATTCGTAGCGCATTAAAAAAAGTAGCCACCCGACAAACTGCGGTAGCTGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTTGGAGCAAAACATAAATTTGCCCATGACGGTGCATATCCAGTTGCATCGACCAAGAAACAGCAAAAGTTATTGATGCTAGATGAATGGGT # Questionable array : NO Score: 5.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.50, 5:0, 6:0.25, 7:-0.00, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: R [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-23] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 9831-14486 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJAWC010000024.1 Acinetobacter baumannii strain KZ-1093 NODE_24_length_62510_cov_282.312265, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 9831 29 96.6 31 ............................C TAAGCTTTATAAAATATTAGATATTCCGAAT 9891 29 96.6 31 ............................T ATCCGAGATAACAAATTCGTCTAAGACGAAT 9951 29 96.6 31 ............................T ACGTGATCCGACAAAAAGAAATGCTGAATTA 10011 29 100.0 31 ............................. ATCCATTTTTTTTGCATTTACCAATTATCAA 10071 29 100.0 31 ............................. ATTGTTGTTGCTTCGGCGTAGCTCATTGGCG 10131 29 96.6 31 ............................T GAAAGTTCCCCAGTGATTGCAGTAGTATCTA 10191 29 100.0 31 ............................. TCATTACCCCAAGTAATGTAGTTATCGTATT 10251 29 96.6 31 ............................T TTAGCCAAGAATGCAACAAGTAAACACGCGA 10311 29 96.6 31 ............................T TGCGAGGTCAAACTATGAAATTAACAGATGA 10371 29 96.6 31 ............................T TAATAGGAAAAAATTGCATTTTAAACTTAAG 10431 29 100.0 31 ............................. TTGAACGCTCAGAAGTTGTTATGACCAAATC 10491 29 96.6 31 ............................T TTAGCCAAGAATGCAACAAGTAAACACGCGA 10551 29 96.6 31 ............................C TACTGACTCACCATTTTTAGTTAGGCGATTA 10611 29 96.6 31 ............................T TTAGGTGATACTTGATAAGAGCGTGAATTAC 10671 29 96.6 31 ............................C GTCTAAGCCTTTTGAATCAGCCGAAAAGATA 10731 29 100.0 31 ............................. ACCACGGTCATTCTTATTCGGTGCGTCTGCT 10791 29 96.6 31 ............................T TCAGAAATTTCCTATCCATTTTACAGCCACT 10851 29 96.6 31 ............................T GATGCTAATGGGGTGCAGTCATGTCTTCAAT 10911 29 96.6 31 ............................T CAGTCTGGTTATCCTGTCCCTGTTTATTTTG 10971 29 100.0 31 ............................. ACTTTGAAATCTCGATCATTGAAACGAATCT 11031 29 100.0 31 ............................. CATTCAAAGAGGCTCAAAGGGTCCAGTCACA 11091 29 100.0 31 ............................. TGCATGAGTGACATAGATCGTTTCTGTATCC 11151 29 100.0 31 ............................. CTGGGAATGACATGCCTACGAAACGACAAAT 11211 29 96.6 31 ............................G TATTGCTTATGAGGCTGGTCAACAGTCACAG 11271 29 100.0 31 ............................. TCCGTAGACATAAAATAACCATCGATCCAAA 11331 29 96.6 31 ............................T TGTAACGTTTAGTAATGGCTTCCTGCTTAAG 11391 29 100.0 31 ............................. CCCCGAAGTCACGAATAAACTGTTCTGGTTT 11451 29 96.6 31 ............................C TGCGAACAATCGTGTTATTTATCATGAGCAA 11511 29 100.0 31 ............................. TAGTCGCTTGCGGTACGATCTTAGCTGCACC 11571 29 100.0 31 ............................. AATCAGTTTTAAGGTGTAACTGGTGCAATCA 11631 29 96.6 31 ............................T GCAGTTCTGCGTTACGTGTTTCAGGATGCAT 11691 29 96.6 31 ............................T AAAGGGCGTGGCAAAGGCATTACGTGTGAAA 11751 29 96.6 31 ............................C TCTACACCTTCGCGAATAAGTACGCAGGGCT 11811 29 96.6 31 ............................T TCATGCGTGATGCAAAGCGACTTGCTGCAAT 11871 29 96.6 31 ............................T GAGCAGGTCGGTTATTCTGAACCTGAAAATA 11931 29 96.6 31 ............................T CCAAAATACCTTTGAGGACCTTGTAGAAGCC 11991 29 96.6 31 ............................T AAAACCATTGTTACTAGATGTACCTGTATTT 12051 29 100.0 31 ............................. GTCAGGCCCTAGCTTTTGAGTCACACTTTCG 12111 29 96.6 31 ............................T TCTGCACTCTGAAGATAAACATTACAAGTAA 12171 29 100.0 31 ............................. CAAGCGATAACTTGCCGCCAATCACTGTTTA 12231 29 96.6 31 ............................C TCAAGACATCAAGATCAATAAGACAGTTGAG 12291 29 100.0 31 ............................. ACAACGCAGTATTTTTGCGATGTTGCAAAGC 12351 29 96.6 31 ............................T AATGCTCAAAGTTATAAAAATAAGACTCCTG 12411 29 96.6 31 ............................T GTTGGGCCAATAATCAGAGTGTGGCCTACAT 12471 29 96.6 31 ............................T CAAGGATTGACTCACAAGATCGGTAATTGTA 12531 29 100.0 31 ............................. GTCTGACCATGGCCCGATATTCCCGATCCGG 12591 29 100.0 31 ............................. TTAGAACCAAAAGTTACTTCAAAAGAACGAA 12651 29 100.0 31 ............................. ACTATTCCTAAAATAATTGATACATAGATAA 12711 29 96.6 31 ............................T CTACAGCAGCCGTCCAACGGTGTGTATCGAT 12771 29 100.0 31 ............................. TCAACAACAATGGTTAAACTGCCATTAATCA 12831 29 100.0 31 ............................. AAGACAGTATTTTGGTAGCGCATCTCCTGCC 12891 29 96.6 31 ............................C TTGTACGAGCGTATTAAATGTACCTTCATCA 12951 29 100.0 31 ............................. ACCGATGAAGCACGAAACACAATCATGCTTT 13011 29 100.0 31 ............................. TACGGCGGATGATGTGGTTCGCCTTCATAGC 13071 29 96.6 31 ............................T TTAGCCACAGCACCGTTTACACTTGGAGCAG 13131 29 96.6 31 ............................T AGTGCACGTAGGTCATGAAAAGATGGGCGTT 13191 29 100.0 31 ............................. GAAGTACGAATCAATGTGAATGAATAACCAA 13251 29 96.6 31 ............................C AGTAACAGCAAAAACAAAAACAGTAACTAAA 13311 29 96.6 31 ............................G TACAGGGGAATTCACGTAGTGCTGGAACAAT 13371 29 100.0 31 ............................. ATCACCATCATCGGTGGCATTAGCTTCAGAC 13431 29 100.0 37 ............................. TCACCAGTGCCAGTGCCAGTGCCAGTGCCAGTGCCAG 13497 29 100.0 31 ............................. ATATTCAAGAACCAGTTTCAAATATTGTTAT 13557 29 96.6 31 ............................G TATGTAGAGTTGAAATGTAGTCCTGCGAAGA 13617 29 100.0 31 ............................. CCACTTGTCTTGACAGCAACTATTGAATCCA 13677 29 100.0 31 ............................. TCTCCCATTCTTCATCTGACTTCAGAAAATC 13737 29 100.0 31 ............................. GAATGTCTAAAATATCTGAGGCATCAGCAGA 13797 29 96.6 31 ............................G TCATCAATACGCTTCAGTGCATCAATGTCAT 13857 29 96.6 31 ............................T AACAGAAGCGCAAAAAAAAGCGTATATCATT 13917 29 96.6 31 ............................T TCACCTGCAAAGTAAATCGCATAAATCTCGC 13977 29 100.0 31 ............................. ATTTCAGCGTCAATAGTCTCAATATGATCGA 14037 29 100.0 31 ............................. TCCCGGAAGGCTTGGCTAAACTTGTACTTTT 14097 29 96.6 31 ............................T CACAGTATGAAAAGATTGGTGATGCTTCGGA 14157 29 100.0 31 ............................. CTTGATGCAGGTCAGTGCAATAAAAATGATC 14217 29 96.6 31 ............................G ACATGGCTATGAAGTTTTATACACATACAAT 14277 29 100.0 31 ............................. CAACAACGCTGTCAACCTTTAGCTAATAAAT 14337 29 100.0 32 ............................. TTAAGCCTTTGATTCCATTGGGTTTTTCTTAG 14398 29 100.0 31 ............................. AGAAAGGTCTAGCAATTGGGGCTGTAGGTAC 14458 29 89.7 0 ........................AT..T | ========== ====== ====== ====== ============================= ===================================== ================== 78 29 98.1 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCACGACACTATTGCGGATATAGCCAACAGCTACCTCGATCATGGAAATTATATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCTTTACCTATTCTACACGGTAAAACACGTCGTGGAGGACTAGTCTTTGACCTAGCGGACCTAGTTAAAGATGCTTTTGTAATGCCAATCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACATTTAACCCAAATACCTTATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTGAATCTTAAAAAGAGAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAAGATGGCGTCAATTGAACTAAAAACATAAATACTTGAATTTTATAATATTTTGAATTTAATAAAAATTATGTGATACATATAGTGATACAAAGTCGATTTAATTAACTATGAAACCTGAGTTTATACAATTATCCCAACTTTTCACAAAATCTGTTTCATGATAGTAAATACTAGCTTTCAAATTATCTTTTAATGCCTTTTTCATTTCTAATGAACGTCCATCAAGTTGGTCATCCGTATATTCAAGATAGTAATATTTGAGTAAATATGAAAACCCTGAGCCATCTCTAATTGATTGACTATCCCCATATTGATCTGCAAACTTTGCCAAATTAGGGAAATCAAAACTGCTAGAATTGTATGACCACTGACCTTTGACATAAATAGTCAATAAATTCATAAAAGTATCTAAAAATTCTTTTTCAGACATTCGGCTAGGATTCAT # Questionable array : NO Score: 5.80 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.64, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //