Array 1 675056-676283 **** Predicted by CRISPRDetect 2.4 *** >NZ_ACZO01000006.1 Vibrio metschnikovii CIP 69.14 VIB.Contig146, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 675056 28 100.0 32 ............................ TTGTTCTAATGTCGTCACTTGATGCGATTTCG 675116 28 100.0 32 ............................ AGTATCGTCAACATCACCAACCTGCTGCTGCT 675176 28 100.0 32 ............................ TCGGCTCTCAGGTCATGTGATGATAATCGTTG 675236 28 100.0 32 ............................ GCATTACTGCGCCTTACGAATACAAGCGCCTT 675296 28 100.0 32 ............................ TCTATACATCCTCATTAGTCTTTTACACTCTG 675356 28 100.0 32 ............................ TTTCTTGGTTAGCTTGAGACCAATGAAGGCAA 675416 28 100.0 32 ............................ TTTTTAGCAATTTCTTTAGCTTCTGTTGGAGA 675476 28 100.0 32 ............................ GATCAACTTCAACAAAGCCGGATTTCTTTCCT 675536 28 100.0 32 ............................ TATTCTCAGTAAGGATGGGAAAATGTGGTATT 675596 28 100.0 32 ............................ CTAACCATAGCCCTAACCTCATTGGATGCCTG 675656 28 100.0 32 ............................ GCTTGGCACATCCACTTGCCGCCGAATTTTTT 675716 28 100.0 32 ............................ TCTCTGATTAAATAGATTTACGGTTTCGTTAC 675776 28 100.0 32 ............................ TGAAATTAAAAAGCATTTCGAAGCGTCTTTTG 675836 28 100.0 32 ............................ ATCAGCCATAGACGAACCTCACTTGTTAGGGT 675896 28 100.0 32 ............................ TTCACTATTTGGGTAAGTACACACGGGCATAG 675956 28 100.0 32 ............................ TTGTCGGACGAAGAATTAGCAGAGGTATCAAG 676016 28 100.0 32 ............................ GTCTGCATCGGTCATTTGTTCTGATTTGGCTG 676076 28 100.0 32 ............................ TTCCAACTTTTTACGTACTAGCTTAGAAGGCT 676136 28 100.0 32 ............................ GAAATCCGACAAGCCGCCCGAGCACTTTATTT 676196 28 100.0 32 ............................ AATGCGCCAGGCTCACCTTACCCTTGCTCTTT 676256 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 21 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : AAGCTTTTTGCATGATTTACAAGGTTTAAACTGGCTTGGTCCGTTATCTGGTTACTGCCAAGTGAGTGAGATATTGGCTATTCCTGAACAGGTGCAATATCGAGTGATCTCAGTAAAGCGTAGCAATTTAAGTCAAGCGAAGCTCAGACGTTTGATCGCTCGCGGTAGCATCGATAAAGAAGGTGAAAAACGTTACAAAGTGAAAATGCTTAGCCAAGGTTTTGATAATCCGTACCTAGATTTATTCAGCAGTTCGACGAAGCAGGTACATCGTAAATTTTTTGAGTTTGGTGAAATACAGCCACTGCCAGTATCCGGAAAGTTTGATTCCTATGGGCTAAGTCATACCACTACGGTTCCTTGGTTTTAACCCTATTTTTTTGCTCTTTAAAAATAATCTTTAAATACAAATAGTTACATCGGGTGATTTAAAATAGGGTAAAAATACATTTTTTGCTCTAACTGCTTGTTGTAACTTATTTTTATGTTGTTATTCTATA # Right flank : ACGCCGGATTCGATGGAATCAAACTCCCGCCAGTCATCCCCGCGAAGGCGGGGATCCATTCTGCAACAGATGCCAAGTGCTTAAGTGAGCGATCAATTGGCCACAGATTACTGATACTTCGCATAGATTCCCGCCTACGCAGGAATGACGGTTTGGTTGTGGTTTTGGGAGCTGAACTCCATAGATCCCCGTCATGTTTTGCCTGCTACTGCTGTGAGGCAGGGAAATGAAGGCGTAGCGATCATCGAAAACTGATCCACTAAATACACGTAGTCAGCATAGACTCCCACCTTGAGGGCAATGATGCTTGACGCTTTGAATACTCGATTGTTCACCTTGATTACAAGAAAGCGTGAGTTGTTTAACAATATGTGCGCCTAATTCCTTAGACACTACGTTGTATGATTGATGTGAGTGGTGGAATACATGAGCTCCCTAACGTTACCTTGCCAGCGAGAGATTGATCTCTCATCAGAGTTAAACGTCGTATTACAAGACAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 751647-752928 **** Predicted by CRISPRDetect 2.4 *** >NZ_ACZO01000007.1 Vibrio metschnikovii CIP 69.14 VIB.Contig147, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 751647 32 100.0 33 ................................ CAGAAAGACAAAAGAAAGATAGTAAAAACTGTC 751712 32 100.0 34 ................................ TTGCCCAGCCAATAATTTCACTTGCCGCATCGTT 751778 32 100.0 33 ................................ GCTCGAGTCAGCTATAGACAACGCATCAGCCGC 751843 32 100.0 34 ................................ TCCGCAAGACTTTATGCCCAGCGATGAGACAGAA 751909 32 100.0 34 ................................ ACTATTGATGTCAGTTTCATAGCTCTTGGGTTTG 751975 32 100.0 34 ................................ AATCAGCCAATCTGGTATATCCAGTTCCATTAAA 752041 32 100.0 37 ................................ TTGTTGAGATATGGGCGGGTTTTGATTGAGTCAAAAG 752110 32 100.0 33 ................................ AGCTGCAAGACGTCTCTTATCGGCTAGCGATGG 752175 32 100.0 34 ................................ CCTTCAACACGCCAGAAGTTGCACCATCACGATG 752241 32 100.0 33 ................................ GACTGAATTTAGTTGCTGTTGGCCCTCTTTTTG 752306 32 100.0 35 ................................ ACTTTCAAATATCTGGTACTGGCTGTAAACACCTT 752373 32 100.0 35 ................................ GTAGTGCGATAGATACGGCAATCAGTGAAGGTAAA 752440 32 100.0 33 ................................ AAGTTATTAATATTGATTTTGATAATCAACGTC 752505 32 100.0 32 ................................ TCAGCGATTTGTATATCTTGGTTCATCAAATC 752569 32 100.0 33 ................................ TTTTACCTTTGGATTAGTTATGGATGCTATATT 752634 32 100.0 33 ................................ AAGTTATTAATATTGATTTTGATAATCAACGTC 752699 32 100.0 34 ................................ AAGTTAGTAAATAACGAGTTAGTTTTACCGACAG 752765 32 100.0 34 ................................ CTTGTTTATGAGCCCAAGGTTAGGACGATATCTG 752831 32 100.0 34 ................................ CAAGATTGTTGAAGATAGGTATGTCATTGCGCCC 752897 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 20 32 100.0 34 GTCGCGTCTCCCGCAGGCGCGTGGATTGAAAC # Left flank : ATTTGTGATCAAAAAATAAGGAGAGTACGCCATGATGGTATTGGTCACCTACGATGTATCTTTTGCTAGTGAAGATGGACAAAAACGTCTCAGGCAATTAGCAAAAGTCTGCTTAGACTATGGTATGAGAGTGCAATATTCAGTGTTTGAATGTGAAATAGACTCAACACAATGGTTAGAATTTAAAGATAAACTTTTATCTATTTATGATCCTGAAGTCGACAGTTTGCGTTTTTATAAGCTCGGTAAAAACTGGCAAAACAAAGTAGAGCACCATGGCGCGAAAGAAGCGATAGATATATTTAGAGATACCCTAATTTTATAATCGCTAGGTTGGAGTGCTCACTAAAACATTGGGGAGCTAGCGATTGCATAAGTTCTTTAAAAATATAGAAAATGTTTATTTTTATAGCTTTACACAAAATAGTTTTCTTCTACCGCGTAAAGTTAGCGGCAAACCATAATATATGCTAGTTTACACGTGCCTTTCACAATAGGCA # Right flank : CACCATTACTGATAACTCGTATCTTTCTGACAAAAGTCCCACCTCACAAGAACATAGTGAAACTCGACTCGCTTAGGTCGACAGTTTGCTGTTACGGCAGCAAATTACCGGGCTTCACTTAACGCTCAACCATACTTTCTTTAAGCTGTTGCCTTGTATCCGGTTTTAGATAACTCATCATAATAAAACTGAGTAATCCACACAGTAGGGTCGGGACGATGGGATGGATGCCCGCTAAATCAGGTTTTAACCACATTAAACTCGTGTAGGTGGAAAGCCCAACGATCATTGAACTCAATGCGCCTGTCGATGAAGACTTTTTCCAATATAAACCGAGCACCAAAGGCCAGAGAAATACCGCTTGTAAGCCTCCGAGTGCCATTAAGTTAAGCCAGACAATCATCTCCGGTGGATTGGTTGCAGCAAAAAAAACTAACAAAGCAAAAATCATCGTCACCCACAAAGATAAGCGAGTCATCTTACTTTCTGCCTGCGGCTCA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGTCTCCCGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : NA // Array 2 805393-805780 **** Predicted by CRISPRDetect 2.4 *** >NZ_ACZO01000007.1 Vibrio metschnikovii CIP 69.14 VIB.Contig147, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 805393 28 100.0 32 ............................ TTCGTTGCTGGCGCTGGCGTAACAATCATCGG 805453 28 100.0 32 ............................ AGTTGTGCGTTCAGCGAACCCCGTATAGTAAT 805513 28 100.0 32 ............................ AGTCATACCAAAGGGTAAGGACCCGAACGTTT 805573 28 100.0 32 ............................ AATAGACATTGGATTGACGAGAACCAAACGTC 805633 28 100.0 32 ............................ GCGCAGCCAAAAACGCAAAACACTCGCCAAGG 805693 28 96.4 31 .............C.............. CAAACTCGCTCTAATCCAAATCAAGCAACCA 805752 28 92.9 0 ...T.......T................ | A [805775] ========== ====== ====== ====== ============================ ================================ ================== 7 28 98.5 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : GCCTTTCGAGATATCAAAACCATTTAAAGTGCTGTTTGATAAAATAGGAATGGTTGAAAGCCGATTAACTGACATTCCTGCACCGAAGCACGAAGATTTCCCAACTTATGTTCATGGTGACAAAGGTTTGGTTTGGGAGCTTTTCGATTGCATCAAGTGGCTAAGTCGAGATAACAATCAACTGGCTAAAAACTATTTAAAAAAGCTATCAGAAAAACTGTGAATGTTTGTATAACAAAGCGTTCAAGAGGGATTCGCAACGCGTGGCATTTTCGTTATGCTTTGATTTTATTGGTTTTTAGTGTGATGCGGTGAGTTGGTCGCTGCGTTGCTCACCCCTTAACGCGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAATTTTAAGTTATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACCATTATTAACAATAGGTTACTGCTAAAGTTTCATA # Right flank : ATTGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTAAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCTTTGATTTTATTAGTTTTCAGTGTAATGCGGTGAGTTGGTAGTTGCGTTGCTCACCCCTTAACGCGGCGTTATGCAGTTGGAGAGTGTATGAAGTTGGTCGAAAGTCTTGAAGAGCTTCAAGCAAATATTTCTGAACTTGAAAGAATCAGAACTTCTGGTTCAAAGTCAGAGAGGGAAGAGTTCTTATCTTTAATAAAAAAAGGCACTTGCTTTGTGCCCTATATTTTTGCCGGTTCATTGTATTTTGCTCCTTCACGCTTCGTAGGATATATAGACAATTCTTTAGAAAAACATAAGAAAAACAGTAATAAAGATGGGCGGGTAACGAATAAAGCCATAGATCAAGTACTAGATACGGTAGCGTCGAGTAATTCTAGTCTTGAAAGTGCTTATGTTTCATACTGTAGCTCACTAGGCT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 809514-809961 **** Predicted by CRISPRDetect 2.4 *** >NZ_ACZO01000007.1 Vibrio metschnikovii CIP 69.14 VIB.Contig147, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 809514 28 100.0 32 ............................ TCTAAGTTCAGTTCCTGTCGTTAGCATATAAC 809574 28 100.0 32 ............................ GAACATATAGACGGATACGGAATTGTCAGGCA 809634 28 100.0 32 ............................ TCTTTTTTTTCATTCTAGCTTAAAAATCACGG 809694 28 100.0 32 ............................ TAATACAGACCCTCGTTCATGTGAAGGCGAAC 809754 28 100.0 32 ............................ TTGTAAGATTTTTCTATCGCTGCTCTGGCGAC 809814 28 100.0 32 ............................ AACGAATATCATTAGGTAAATAACCGAGCGCT 809874 28 100.0 32 ............................ GTCAAAGCTTGCATTGACTACGTTTTCAAACG 809934 28 96.4 0 ........................A... | ========== ====== ====== ====== ============================ ================================ ================== 8 28 99.5 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : TTTCCGGCTCTGCTCTGATAGCTTGTGTTCGTAAAAGGTTCAATTGTCGCTGAAAGGTCTCTTCCTTTGGTGTTGTTGACCCCTTGATTCCGCAGGCTAATTCGCTTCAACTTATTTGGGATCTTATCGGCAACAATGATTGTTGAAAGTAGGCTGGTTTTTCATTTTGAGTTAAGCTGCTTCGAACAAATGAAAATTGTAAAAGTTTAATATAATCAATAAGTAATAAAGCATAACAAACGCTTCAAGAGGGACTTCTAACGCGCGGCATTTTTATTATGCGTTGGTTTTTGTGGTTACGGTGTTATGCGGAAAGTTGGTAGTAGCGTTGTCAGCCCCTTAAGCGGGCGTTAACTGGCAATAAAATTACCCATCTTTTTTCGTTGAATTTTAAGTCATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTTTTATTAACAATAAGTTACTGATAGAGTTTCATT # Right flank : AATGGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTCAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCTTTGATTTTATTAGTTTTCAGTGCAATGCGGTGAGTTGGCAGTTGCGTTGCTCACCCCTTAACGCGGCGTTATGCCTTTGGAGGAAAAATGGAACAACTCAGGTCTTTAATAGAGCAGTTTCGGCTGGCTATGGAAGCTCTTAGCCCACATGACTTTGATGGGACTTCTCTTGCTGTAAGCGAGTTTCCTCATGCGTGTTGTGATGATTGCTCACAGTTATTGGCGGCTTATTTAACTGATAACGGTTTCCCTCAGGCAAAGTTAATCCGAGGTGAAAATGGCGGTTTTGGGCAAGAATTAGGCTCCCATGTTTGGCTATATTTGAATGGGCTGCATATTGACATTACAGCAGACCAATTTAATGAGTATGGTTATGAGAATCCATCTGTGATTTTATCTGATCACAGTGAATTCCTG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 4 836369-836697 **** Predicted by CRISPRDetect 2.4 *** >NZ_ACZO01000007.1 Vibrio metschnikovii CIP 69.14 VIB.Contig147, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 836369 28 100.0 32 ............................ GAGAACGTATTGAATAAAACGTCTTACACATT 836429 28 100.0 32 ............................ TCACGGCGTCCCATACATGAGCCGGAGAATGT 836489 28 100.0 32 ............................ TAACCCGTTAAACTTTTTTGCAATGTTCGCCC 836549 28 100.0 32 ............................ AGCGTGCATTTGCCGCATCAAGCTCCTGCTCT 836609 28 100.0 32 ............................ TTGGTCAGTTGCATCGTTTGTATGCCGATCAT 836669 28 100.0 0 ............................ | A [836692] ========== ====== ====== ====== ============================ ================================ ================== 6 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TTTCCGGCTCCGCCCTGATAAATTTTGTTCGTAAAAGATTCAATTGTCGCTAAAAGGTCTCTTCCTTTGGTGTTATTGACCCCTTGATTCCGTAGGCTAATTCGCTTTAACTTGTTTGGGATCTTATCGACAACAATGATTGCTGAAAGTAGGCAAGTTTATCATTTTGAGTTAAAGTTTCTTGAACCAATAAATGTTGGAAAAGTTCAATTTAATCAATAAGTAATAAAACATAACAAACACTTCAAGAGGGACTTCCAACGCACAGCATTTTCATTATGCGTTGATTTCGGTGGTTTCAGTGTTGTGCGGAAAGTTGGTAGTCGCGTTGTCAGCCCCTTAAGTGGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAATTTTAAGTTATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTATTATTAACAATAGGTTACTGCTAAAGTTTCATA # Right flank : ATTGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTAAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCATTGATTTTATTAGTTTTTAGTGTAATGCAGTTAGTTGGTAGTCGCGTTGCTCACCCCTTAACGCGGCGTTAAGCAGCAGCTTGTAAACAATAACTTGTATACAAGCTACTGAGAGTACATATCAAGCAACTTGGATGTTACACCACTCGGCAATTTCATCCGCTAATGAATCTATCTTTACATGCGAGCCAACGTGAAAGTTATGTGGTTTTAAGAGCCAGATAAACTTGTCTAATTCGTTCTCGATTTCAATCTGTGCATCTCTTTTCAATGAGTCGTCAGGCAGCATTAAGAACACGGCATTCGCTTTGGTTTTTAGGTGATTAGATGCGATATCTATGTCTCTATATCCATCAAACAAATTGCACTTTACTCGTTGGACATCTGAATAGGCAGTAGATACAAGAGTAGCTACACC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 5 857819-858446 **** Predicted by CRISPRDetect 2.4 *** >NZ_ACZO01000007.1 Vibrio metschnikovii CIP 69.14 VIB.Contig147, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 857819 28 100.0 32 ............................ TTCTTGACATTGAAAAGGTTCAGTTACAAGTC 857879 28 100.0 32 ............................ TTTTGATTTATCCAATTACTTAACGTTTATAC 857939 28 100.0 32 ............................ TGTATATACACCGTACAGAAATGACAGCGTCA 857999 28 100.0 32 ............................ ATGCTTACGACTCATTTCATAAACATCATCGG 858059 28 100.0 32 ............................ GGACCTAGACAGAGCGCGTCCGCTTCGGGTTT 858119 28 100.0 32 ............................ GCCTTTGGCGACTGCTTGGCCGTCTTTATCAA 858179 28 100.0 32 ............................ AGTAATTCTTCCGATCGTTGTCCAGTCATTTG 858239 28 100.0 32 ............................ TATCTGGTATATCGTTAATAGTGAATCCAGAC 858299 28 96.4 32 ..............C............. TGCTTGGTCGAACTGGATGCCTTCGTCTTCAT 858359 28 100.0 31 ............................ CAAACTCGCTCTAATCCAAATCAAGCAACCA 858418 28 89.3 0 ...T.......T.T.............. | A [858441] ========== ====== ====== ====== ============================ ================================ ================== 11 28 98.7 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : AATGAAGCTCCATTGGCATATATGTACGAACAAGCATCTTTAACCGGGGTTTATTTTGGTTCTGAAACTGATGAAGCGTGCATTGAAATTATTTGTCTCATTTTACAAGGTCAGAATCCAAATGTTCGCTTTTGGCAAGGAAAGAAATGTGAAGACAAATTTGGCTTGAAGTTTGAAGAGTTTTTCTATACCTCGAATATTAAAGCCCAAGAGTTGGGTGTAATCTAATCACATAACAAACGCTTCAAGAGGGACAGCCAACGCGTGGCATTTTTACTGTGCGTTGATTTCGGTGGTTACGGTGTTATGCGGAAAGTTGGTAGTAGCGTTGGCTGCCCCTTAAGCGGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAATTTTAAGTTATTGATTTATATTAATAATAAATCGAGTTAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTTTTATTAACAATAGGTTACTGATACAGTTTCATA # Right flank : ATTGGTGATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTAAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCTTTGATTTTATTAGTTTTCAGTGTAATGCGGTGAGTTGACAGTTGCGTTGCTCACCCCTTAACGCGGCGTTATGCTTTATTGAACCTCAGCAAAATCAATATATAAATTTTAATGGGAAAGCTTGGTCTGATTTAGAAGTTTTCCTATTCTAATTTATTGATATTATGAGTTTATTGTTCTTTTTTGTGGCGATTGAAAGTTGAACGATGCTTTGGTGTTTTTGTCGGGTTTTGCTCTGATAAATTGTGTATGCAAAAGGTTCGATTATCGCTGAAAAGTCTCTTTCTTTGGTGTTGCTGGCTCACTGATTCCACCGGCTATTTCGCTTCAGCATGTTTGGGATCTCATGAACATCTTGTTTGCTGAAAGTGTTTGGTGAGCGCAAGTTTATCGATGATTTGGCGCTTTTTTCCGGCTC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //