Array 1 4115022-4112616 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009876.1 Klebsiella pneumoniae subsp. pneumoniae strain KPNIH31 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4115021 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 4114960 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 4114899 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 4114838 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 4114776 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 4114715 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 4114654 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 4114593 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 4114532 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 4114471 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 4114410 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 4114349 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 4114288 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 4114227 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 4114166 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 4114105 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 4114044 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 4113983 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 4113922 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 4113861 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 4113800 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 4113739 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 4113678 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 4113617 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 4113556 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 4113495 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 4113434 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 4113373 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 4113312 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 4113251 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 4113190 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 4113129 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 4113068 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 4113007 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 4112946 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 4112885 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 4112824 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 4112763 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 4112702 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 4112644 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 40 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //