Array 1 104690-107699 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASXS01000003.1 Vibrio fluvialis PG41 contig3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 104690 28 100.0 32 ............................ GCGCTGGTGAAGCCATCAATCACTGTTCAATA 104750 28 100.0 32 ............................ GCGTTCTGAAACTCAGCTTCGAGAGCGTCGAG 104810 28 100.0 32 ............................ AGAAACGGCCTTCACTGGCGCTTCAAACGGTT 104870 28 100.0 32 ............................ TTGAATGCGTTATCGATTCTGATGCTGCGATT 104930 28 100.0 32 ............................ GGTAATTCTGGGTGGAATAACATCCTAACAGC 104990 28 100.0 32 ............................ TATTACCGGCGTATTACCTGTGTAATCTGGAA 105050 28 96.4 32 .............T.............. GCCCGCCGAACGTGCGGGAGCCTCCCGAGGTT 105110 28 96.4 32 C........................... GTATTCTGGTTGAATTCTGGCTGAGGCTGTCC 105170 28 100.0 32 ............................ TTGCGGATACCGTTTAAACTCATCGTCCATGC 105230 28 100.0 32 ............................ GCTAAAGAAGTCTTGAAGTCCGCTAAACACAT 105290 28 100.0 32 ............................ CAAAGCAGCTAAGTTACCCTGATAAAAATCAG 105350 28 100.0 32 ............................ AACCATTTCAGATATTGCGTTAGAAACTAATA 105410 28 100.0 32 ............................ AACAGGAACAGTGTCACCATTCTGAACATAAA 105470 28 100.0 32 ............................ TGCATAATCTGGAACTGTTGTTGAGATAGCCA 105530 28 100.0 32 ............................ GATATAACCCCACATGGTTTGGTCTGCTGAGC 105590 28 100.0 32 ............................ ACACCATCGACCGTGAAGCCGCTTTGCTGCTC 105650 28 100.0 32 ............................ CAAAAAACAGGAGGCTCATTGAATACCTTTCC 105710 28 100.0 32 ............................ TCACGGTGTGGCCTAATGCACTTCTCGTCTAT 105770 28 100.0 32 ............................ ATCGTGCGGCCAAGCCACGGGAATTTTATTTG 105830 28 100.0 32 ............................ TTTACTTCAATCAGGCATGTTGCTGTGCCGCT 105890 28 100.0 32 ............................ TATAAAACACAAGAGCAAGCAAAGGAAATTAA 105950 28 100.0 32 ............................ AGATTGAGTCAAACGATCGGTTAAGGTTGTCT 106010 28 100.0 31 ............................ GCTGGCTCTTGCCTTCTTCAATACCGACAAA 106069 28 100.0 32 ............................ TGCACCCTGGGATCCGAACTCTGTGCTTGTTG 106129 28 100.0 32 ............................ TGACCAAGAAGAAAAATCCAATTGACCGTCAA 106189 28 100.0 32 ............................ AGCAGGGCGGCGTGACGCCTTACCGTTTTCAT 106249 28 100.0 32 ............................ GCAACAGCTGAGAACAAAATGAGCGCACTGTT 106309 28 100.0 32 ............................ GGTATTGGTGACGCTATCGATGGCCTTGCAAA 106369 28 100.0 32 ............................ TCATCGAGAGGTCACACCAAGCGAATATTGGT 106429 28 100.0 32 ............................ GAGCAGGGCCGCAAAACTCAGGAATACACCCA 106489 28 100.0 33 ............................ GTTAACAAGCACCATTGCTGAGCCGTTGACATG 106550 28 100.0 33 ............................ TTTCACATTTTCGAGATAAAGATATTTTTCCTT 106611 28 100.0 32 ............................ AATTTGAAACGCTTCTGGCTACCCATAGAGCT 106671 28 100.0 32 ............................ AATGAACACTGTCATCAGTCTGCGAGCCACGA 106731 28 100.0 32 ............................ AACAACTGGCGCTTCGACGCAGAGGACCAATG 106791 28 100.0 32 ............................ GCCAAATCCAAGTGCAATGGTTAAGCCGCTGT 106851 28 100.0 32 ............................ AGCCCAACATAACGGTTGCCAAGCGTATCGAT 106911 28 100.0 32 ............................ TGACCATTGAATTAAGTTCCGATCGTGTTTAA 106971 28 100.0 32 ............................ GTTGGTTGATGTTCACGGAAGCCGTTGACATG 107031 28 100.0 32 ............................ TTTTCGTCGCTGGCGACGGACTTGATTCGTTT 107091 28 100.0 32 ............................ CCGCAGGGATAAGGGAGCAAGCCTGCGACCGA 107151 28 100.0 32 ............................ TAGCAGGACGAGGTGTATTTTATGCCTTTGAA 107211 28 100.0 32 ............................ GTGATGACCAAGCAGGAATAGCCCTTGCTCAT 107271 28 100.0 32 ............................ AAATACCTGCAGGACTACATCAAAACCCAATG 107331 28 100.0 32 ............................ GCAATCAAAAGAAGTGGTGACGGTGATTGAAA 107391 28 100.0 32 ............................ TGCAGTATGTAATGTTGGGTCGGTTGACTCCG 107451 28 96.4 32 .............G.............. TAAACCTGTTTACCTGGTGTTAATGAGTGCCT 107511 28 100.0 32 ............................ ATTCTAAAGCGCACGACAAACGTTCTTAAATC 107571 28 89.3 13 .........................CTG TATATGAATTTCT Deletion [107612] 107612 28 92.9 32 ...T................G....... TTGACGAAGTACTTTACCCCAACTGCCCGCTA 107672 28 71.4 0 .C.......TAC.......AGG.....T | ========== ====== ====== ====== ============================ ================================= ================== 51 28 98.9 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GATGTAACTTACGTAAGCTTTGTACGCAAGCAGGTGAAATCGCCCGAACGAATAGAACGGGATATGCAGCAAAAAGCCGAACTATGGGCAGCAAAATCTGGCAAACCGCTGGTGGAATGTCTAGCGGATTTGCGACAAAGCAAGCCGACAGCATTGTGCTCTTTGCCGTTTATTTACTTGCATAGCCAGCAAACCAAGCAACGCTCACCAGAAAAAAATAGCAAGTTTCCGCTGTTTATTCAGATGCAGCAGCAAAGTACATCACAAGATGGGGGCTTCGATTGCTATGGTTTGAGTAGCAAAGCGAATGGCCAATCAGCATTGGCTACCGTACCTCACTTTTAAATTGAACGAAAAAGGGTATTTTTTACCCTTTATTTTTGCTATTTAAAAATATGCTTTAAATACAAATGGTTGCAAATGGTGGTTTTTAACAGGGCAAAAATGCATTTTTCATCCTAACTACTTGTTGCAGCATTCTTTTATAGAATTATTTTATT # Right flank : TTAAAACGGGATTCATGGCAAACGGTCGTGGAAGTTGTATCTTACACAAAAACCTAACGACGTCGATATCAATAGGTTTTTATGTGTATTTATTGGTATATTTAGTGCGTTATTCTGAATTGGTTGCAAGAGACCAACATTAAATTTTTCATAATTGTCTATTGATTTGGTTAAATCATACGTTATTTTCGATAACAACAATGACATTTTAGGTTCGCAAGTATCCAATGATGTTTTATTTCCAGCATTACTATTTCTTACATTGCCACAAAGCATCCTTGTTCATATTACCCAACTAGTGACAGTGTCTCCGTCATTACTTGATACCCAATCTTCTCGCTAGGCGGTGTAGGTTTCCACTATCCAGTTCCAATTGTCGAGCCGTCGCTGCCCAGTTGCCTTGGTTATGATTGAGCGTTTGAACAATGATTTTTTTTTGATACCTATCCGTTGCTTCTTTAAGCCCCATACCTGATTCACTAATCGGCGAAATGTTGGTT # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //