Array 1 2415-208 **** Predicted by CRISPRDetect 2.4 *** >NZ_WBJN01000074.1 Prevotella copri strain YG5 YG5_74, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 2414 33 97.0 32 ................................G TTTTCGCCCTTATATCTTACGTGCTTGGTATT 2349 33 97.0 32 ................................A CTTGGAACATGTAAGCGAGCAAAAAGAAAGCG 2284 33 97.0 33 ................................G GGAGATTTATCTAACTTTTATATTTGCCCAAAG 2218 33 97.0 33 ................................A TCAAGAACTGATGCAGCTTTGTTTGATACAAAA 2152 33 97.0 33 ................................G TCAACGCTTTCGTTACTATGCTCATTGATGTAA 2086 33 100.0 33 ................................. TTATGCTTGCATATTGCTTGCAAAAACACCTAG 2020 33 100.0 34 ................................. TCAGATGTCAATCAACCAGCTCGTAGAGCAGGAA 1953 33 100.0 33 ................................. CTATAGCGGGTGCCCTGGATAGTGCCCAGGGCT 1887 33 100.0 32 ................................. CGTTGCATAACACATATTGACCATGCCGACGT 1822 33 100.0 33 ................................. TCTCTTGTCGCCCACCAGGGATTCGGACCCTGA 1756 33 100.0 33 ................................. CTCCTCAATCTCTTTAAGTTTTGGAGCAGCAAG 1690 33 97.0 32 ................................A GGTATAACGAAATCACTAGCATCAGTCTTAAA 1625 33 97.0 34 ................................A GGATGTTTAATGCCTTTTCGTTGAAATAAAGAAA 1558 33 100.0 32 ................................. GATTTTTATGATTTCGATAATGATTTCGTTGA 1493 33 100.0 33 ................................. TCATATTGTCTGCGCTTAACCGCGATGCGCCTA 1427 33 100.0 32 ................................. ATAATATGGTTATTTTGTGGGTACCCTGGAAG 1362 33 97.0 32 ................................C TGGCACGAGTGCACCCCCTAGATGCCAGGTGC 1297 33 97.0 33 ................................C AACATTATGGGTCTCCACGGTTTGAAAAATAAA 1231 33 97.0 32 ................................G TCTAAGTACTGTTATTTTTTAACTCTTACTTA 1166 33 97.0 32 ................................C TGAGCAGTTTGCCAATTTTAAGGTTAATAATG 1101 33 97.0 33 ................................C ATTGATGATGCGTTGCTGTCAATCCCTGATGAC 1035 33 97.0 33 ................................G ATCCTCTGCTATATGAGCGATGTGCCAGGCTTG 969 33 97.0 33 ................................C TGGCACGAGTACACCCACTAGATGCCAGGTGCA 903 33 97.0 34 ................................A TTAATAGCAAAGATTAAAGTGTATGGCACACAAA 836 33 100.0 34 ................................. TTAAATTTGCTATACCAATATTACCGCCATAAGA 769 33 97.0 34 ................................G TACTGCTTACGGAAGCGATGGTTGGTGTACTTAC 702 33 97.0 32 ................................A GCTTTGCCCAGGAGTTTCACATTGACTGTGAA 637 33 100.0 34 ................................. TTGGCCATGCCGAATTGCTTATCAGTTGATATAA 570 33 100.0 34 ................................. TGAGCATAAATATGTGCATTAATGTACATGTGGA 503 33 97.0 33 ................................C CCGAAAACCCACAAGATGGAAGTCGGGGTGAAT 437 33 97.0 33 ................................A TAACCTGACTATCAAAATATTTCCACAACTGAG 371 33 100.0 33 ................................. GCGAAATTGTTGCGAAACCAATTGTGAGGGGAA 305 33 97.0 32 ................................A TGCAGTTGGAAGAGAAATTTGAGAAACAAGAA 240 33 97.0 0 ................................A | ========== ====== ====== ====== ================================= ================================== ================== 34 33 98.1 33 GTCACACCCTTCGTGGGTGTGTGGATTGAAACT # Left flank : TGATGATTATCCAGTGTTTTTAATCAAGTAGTGTATGTTTGTATTGATTACTTATGATGTAAACATTACCTCGGCTCATGGTGCGAAACGTTTACGCAATGTAGCAAGGGCGTGTTTGAATTACGGAAAGAGAGTTCAAAACTCTGTTTTTGAGTGTATTTTGACGGAATCTCAGTTTTTCGTATTGAGGGACCAGTTGAAAGGGATTATTGATACTGAACAAGATAGTATTAGGTTCTATATTCTTGGGAAAAATTGGAAACGTAAAGTCGAGACTTTGGGTAAGGATATGGGGCTTGACTTTACTGGTGAGCTTATCATTTAATGTATGAGGGTGCGAACCTATAGTATTGCAAAATAACCTATAGTTTCGCACCTTCTTAAAATCAGTGACTTACAAATATTATGCCTTTTATAATATTTTACGTGTAATTATTTTGCCATCTTTCGCAAAATAATTATCTTTGCATCATGATATTCAGCTATTTGCTGAATATGCA # Right flank : AGAAAACAGATTTTATTTTCTGAGCCCACTTGAAAAAGTCATTTTTACGAAAACGTGCCATTGATTGTCAATAAGTTACAAGAGAGTGTAAACTAAACTGTGTCAAGCTACAATAAAAAGTAGTTTAACACAGTTTTTATATTATGGACAACTTAGAAATTGATTACAAGAAAGCAGCTCAGCAGTTGCGTAGTGGTGAAGCCTTATT # Questionable array : NO Score: 5.69 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.53, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACCCTTCGTGGGTGTGTGGATTGAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //