Array 1 247279-252980 **** Predicted by CRISPRDetect 2.4 *** >NZ_SAYL01000005.1 Nocardioides sp. HY057 Scaffold5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 247279 29 100.0 32 ............................. TCTTCGGGGGAGTCGAGCCACTTTTTGAAGTG 247340 29 100.0 32 ............................. GGATCAGTGGCGTGCGTCGCTGAAGAATCTCC 247401 29 100.0 32 ............................. CTGGGGCTGCCCGTGCCGGTGACCTATGACCG 247462 29 100.0 32 ............................. GTGGTGTGCGCGGTGGTCGTCGGCTCAATGCC 247523 29 100.0 32 ............................. ATGGGGGCGACGGCCTCGCCGGATGAGGCGGT 247584 29 100.0 32 ............................. AAGACTGGCCCTGAGGTTGCCGAGACCTTGGG 247645 29 100.0 32 ............................. AGTTCGACGCGCTGGCCGGGCCAGTTGTCGGA 247706 29 100.0 32 ............................. CAGCATCCTGAGCGGCGAGATTGCTGCTCAGG 247767 29 100.0 32 ............................. TGGAAGCCTCGGCACTTCAGGTTCTGGTCGAA 247828 29 100.0 32 ............................. GGATCAGTGGCGTGCGTCGCTGAAGAATCTCC 247889 29 100.0 32 ............................. CGGAAACCAGGGGACGTGTACGTGCGCTCCGT 247950 29 100.0 32 ............................. TTGGTGACCTTGCTCTTGTCGATGTGGCCGTA 248011 29 100.0 32 ............................. TGAGGAACGGCACGCTCACCCTGGCTGAGGCC 248072 29 100.0 32 ............................. GACGGGAGGGTGGCGTGAGCCTGACTCTCAAG 248133 29 100.0 32 ............................. ATGAACGCGGCGAGCGCGTACAAGCTCCGGTA 248194 29 100.0 32 ............................. GCGCACATGACCGGTGTGGTAGTGATCGGCGC 248255 29 100.0 32 ............................. GTCCGCGGGCGGGTACTCCACCGCGGGAGTAC 248316 29 100.0 32 ............................. GCCATGACCACCCGCGCCGTGCCCGGCGTGTG 248377 29 100.0 32 ............................. GCCCTCGCTACCTCCGAAGCTCCAGCGGCATC 248438 29 100.0 32 ............................. CACTGCGACGCAGACGCGTTTGCAGTACCCGC 248499 29 100.0 32 ............................. GACACCGGGATGGTGCGCTCCTTGTAGTAGTC 248560 29 100.0 32 ............................. GTGCCCACGGACACCGAGGTAACGGCCGTGGA 248621 29 100.0 32 ............................. CGTCCACGGTCGTTTCCTGAGCGTGAACGGGC 248682 29 100.0 32 ............................. AGACTGAAGCGCTTCTCGCCACCCGTGAGTCC 248743 29 100.0 32 ............................. CACTTCGATCACGTCCACGTCTCCTTTAAGCC 248804 29 100.0 32 ............................. AGCGCGAACACCTTCGGGCAGCAGTTCGATGA 248865 29 100.0 32 ............................. ATGGTCGCCATCTGGCGTGACTCCACCGGTGC 248926 29 100.0 32 ............................. GCCTGGCAGTTCTTCAACGTCTCCACGTCGTG 248987 29 100.0 32 ............................. CAGACGGGGGACGTCGCCGCCACCGAAGATGG 249048 29 100.0 32 ............................. CATCGTTCCGCCCACCACAAGCGATGTCGCCG 249109 29 100.0 32 ............................. GCTGAGCGTCAGGCCTACCTGACCCGTGGTCT 249170 29 100.0 32 ............................. TTGATCTCCAGCGTCACCCACTATCGCTCTCG 249231 29 100.0 32 ............................. CTGGGTGCACTGAATTACTGGCTACCGCTCTC 249292 29 100.0 32 ............................. ACCTGCCCCATCCGCACCGACTGCCTCGAATG 249353 29 100.0 32 ............................. TCGGTAGAGCGTTTGCCACCCATGAGGCTGCC 249414 29 100.0 32 ............................. TCGGTAGAGCGTTTGCCACCCATGAGGCTGCC 249475 29 100.0 32 ............................. CTCTTCATCGCATGGGTGGCACTCGCATGACC 249536 29 96.6 32 ............................G ATCTCATCACGCCGGCCCAGCTCGCACGAGCA 249597 29 100.0 32 ............................. CTACGACCCCCTCGCGGGGATCTACTGACCCG 249658 29 100.0 32 ............................. GCTTTTTCGGCGTCGCTGACCTTGATCGCGGA 249719 29 100.0 32 ............................. GCGCCCTGCAGCATCCCAGCGCCGAGGCGCCC 249780 29 100.0 32 ............................. AAGCCCGCCACCGCCCCGGTCACGATCCCGCT 249841 29 100.0 32 ............................. GCTTTCTCCGGCTCGATCCGTGCCGCCATGGG 249902 29 100.0 32 ............................. CCGTCCGGCAGCCTCAAGCGATACCTCTGCAC 249963 29 100.0 32 ............................. CGGCACCCGAACCCGCTGATCTTCTACATGGG 250024 29 100.0 32 ............................. TTCGTCAAGTAGCGGCTGTGTGCCGCTTCTAC 250085 29 100.0 32 ............................. ATCGACGCGGCCAAGGCAGCGAAGACGAACGC 250146 29 100.0 32 ............................. CTGGACAAGATCGCCGGCGTCCCGTCGGCCAT 250207 29 100.0 32 ............................. GCCATGACCACCCGCGCCGTGCCCGGCGTGTG 250268 29 100.0 32 ............................. AGGTGCCCCTGGCCGTCGATGGGCTGGAAGAG 250329 29 100.0 32 ............................. CACACCCCGGAGCAGAACCCCCTCCCCGCCTC 250390 29 100.0 32 ............................. GCCTCCGTCGCCCGCGTCATCGCGGCCACCCG 250451 29 100.0 32 ............................. TCCTCGACGACGCGCTCGTCGACATCGAGGGC 250512 29 100.0 32 ............................. CTCCAGGTCAAGGTCACCGCACTGGATGTCCA 250573 29 100.0 32 ............................. TTCCCCAAGGTTCACCCCCACGAAACTGGTGT 250634 29 100.0 32 ............................. CCCCGTCGAGTGGCGGGGGTTGAGTGTGGGTT 250695 29 100.0 32 ............................. TTTGCCGATGTCGCGGGTATCGAGATCGCGTC 250756 29 100.0 32 ............................. CATGCGCGACGAACCCTGGACGCGGCGCTTCT 250817 29 100.0 32 ............................. ACTGATGGACAAGTCGGATGCCTCCCTGGCCA 250878 29 100.0 32 ............................. CTGGCCGACGCCCGCGCCCAGGCAGATGACCG 250939 29 96.6 32 ............................T CTCCAAGCAGGGCAAGGACTGGTCTCCGTGGG 251000 29 100.0 32 ............................. GCGTCCGCGTCTGACACGTCGGGGTGCCAGTG 251061 29 100.0 32 ............................. CTGGACAAGATCGCCGGCGTCCTGTCGGCCAT 251122 29 100.0 32 ............................. TGAGATGCAGCGAACCGGCACAGAGTCAACGG 251183 29 100.0 32 ............................. ATGAACTCGATCCCGTGCCCAGGCTTGGCGAT 251244 29 100.0 32 ............................. TGGGACAAGCCGCGACGAATTGAACCCAGGGG 251305 29 100.0 32 ............................. CTCCCGAACACCACGAAGCCCCAGGCTGTGGC 251366 29 100.0 32 ............................. AATCTGACCGGTTTCGCGATGCCCAAGCAGGT 251427 29 100.0 32 ............................. AAGGTCGCGACCAGCGGCAAGGTCCAGGGCGA 251488 29 100.0 32 ............................. TGTGTGGCGAGTTCGGCCTCAGTGATGTAGCG 251549 29 100.0 32 ............................. TGTCGTGCGGCTTTGCGGTCGCTGATGGCACT 251610 29 100.0 32 ............................. GACGCGATCGTCGGGCACGCCAACGCGGCGCC 251671 29 100.0 32 ............................. GAATCCGGCGTCCAGATGCGGAACCAGAAATT 251732 29 100.0 32 ............................. GAAATAGGTTCAAGTCCTGGTCCACCTCAGCC 251793 29 100.0 32 ............................. TGGAAGCGCGCCGACACTGCCGTTCGTGAGGT 251854 29 100.0 32 ............................. AGGGAAACGGTCGACATGCCGTCAGCGTCCTA 251915 29 100.0 32 ............................. GAAGAGTCCGCGTTCTGGATCGACGAACACGG 251976 29 100.0 32 ............................. GCACCGGGCCATGCGACGGCTGCATCGACCAT 252037 29 100.0 32 ............................. GAGGCCGTGCAGGACCTCGTCACGATCGCGAT 252098 29 100.0 32 ............................. GTGGGCGGCGAGACAGTCGGCGATGGAGCGTT 252159 29 100.0 32 ............................. ATGGCGAAGGTCTGGAACCGGCGGCGGTTCCG 252220 29 100.0 32 ............................. CGGTTCCCCGACACGAAGAACCAGAACCCCAC 252281 29 100.0 32 ............................. AAGACGCTGGCCGACGAGGAAGCCTCCCAGCT 252342 29 100.0 32 ............................. TCGACCTCGGGGCCCTGCAGCCTCTCCGGAGC 252403 29 100.0 32 ............................. GTCGCCTGAATCATTGCGCCGCCCAGGAGTGC 252464 29 100.0 32 ............................. GCAAGGACCGCCGGTCCTCCACCCGACTCACC 252525 29 100.0 32 ............................. TCGCCCGGACCCTGGACGGCCTCACCGTCCCC 252586 29 100.0 32 ............................. TTCACGCCCGGAAGCAAGTTCCTCAACAAGGA 252647 29 100.0 32 ............................. GTGTTGCCCTCGTCCCAGAACGGGACAGCGGG 252708 29 100.0 32 ............................. ATCACCAGTGATCGAACCAGTGAGCGAGCTGC 252769 29 100.0 32 ............................. TGCCCCTGCGGGTCGCCGCTGCCCTGTTCCAT 252830 29 100.0 32 ............................. TGGCGGTGCTCGTCGCTCCACGCCAGGACCGC 252891 29 100.0 32 ............................. TTCGCGACGGCTGTGTCTGTGGCCGCGAAGCA 252952 29 89.7 0 ............T.........C...C.. | ========== ====== ====== ====== ============================= ================================ ================== 94 29 99.8 32 GCCTTCCCCGCGCGAGCGGGGGTGAGTCC # Left flank : CGACAACGCGGCCCATGCGGGCTGAGCGGCTCGGGCTGCGGCGACGGCGGCCTGCACGTCAGCGGCGTCACCGGCGGAGACCTCGGCAATGACCTGTTCGGTCGCTGGGTTCAGGACCTCGATGCGTCCGGTCCCGGCGCTGTCGCGCCATGCGCCGTCGACGTAGATCTGGGACCTGTTCTGGACCTCGGACATGGGTTCCCTCCCCTGGTGGATTCTTGGGGTGAACCTAGCGTGACGTGGATCACGCCAACAGGGGTGTGGAGAGATTTTCCGACCTTCGGTCGGACGTGAACCCAGATTCACTTCCGGGGACCGCGGATCAGCGATGGTCGTTCCGTCCTAGGCCTGCTCACTTGACGCTGGGGCGCTGAGAATCGGCTTGAGGGGCCCAGCCGCCGGCAGTTTCACGGCAGGGGGAGACGGACTGGGGGCGAGAGTCTTCAACGGGAAACACTGAGGCTGGGCCAGTCTGCTCGTAAAGTAGCAGGTCAGGTAGG # Right flank : CACGGGCAGTCTCCCGTAGGCCGCACCAAGAAAGAGACCGAAGACGTCGGTGCTGTGGTGCACAGTGGCCGCGTGCTGACGGGGACAGAAGAACTCAATGATCTGGGCGACGCGTCTCGGCGCCCAGATCCGCGACTCCACGGCAAGGATCCAGGCCCGAGGCCAGGCCGTGACGGGTCGTACCCGCTCCTGTGCCACCTGCTCGACACGGCAGTCGTGATGCAGCACCTCTGGGACACCCGGGTGCGGCCTGAGCTTCGGAGCGCCATCAGTCGCGCGGCCGACGTGGATGCGGACCAGATGCGGAAGTTGTTGGCCTACGCTGCGGCGATCCACGACCTGGGCAAACTCAACCCCTACTTCCAATTCCAGGAGCGTCGCGGATCAGGTTTCGACTTCGCAGACGAGCTGGCGAGCGGCGTCCGCCTTCCCAAGACTCCTGGAACCCTGCGCTCGGCGATGGATTCAGACCCGCTGCATCCGCTCAGGCGCCACGAATT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTTCCCCGCGCGAGCGGGGGTGAGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //