Array 1 71350-66192 **** Predicted by CRISPRDetect 2.4 *** >NZ_SDJR01000009.1 Oerskovia turbata strain JCM3160 contig9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 71349 29 100.0 32 ............................. TGCACCTGGTCGAGGAGATCGACTACGAGTAC 71288 29 100.0 32 ............................. ATGCTGAAGTCGCCCGCGCATTACAAGCACTC 71227 29 96.6 32 ............................G GTCAAGACCCGAAAGTCCAACGGCTCCTCGAA 71166 29 100.0 32 ............................. TCCCACGGGTCGGCCTCGGATGCCTCGAGCGC 71105 29 100.0 32 ............................. GTCAAGACCCAGGCCAAGGACACCGGCAAGGC 71044 29 96.6 32 ............................G ACCCAGCGCGTAGCGGCGAGAGCCAGGTCCTG 70983 29 100.0 32 ............................. CCGTGGCTGAGTACACACCCAGCACCGAGCAG 70922 29 100.0 32 ............................. CTCAGACCGAGGAATTCGACTGTTCGGCCACA 70861 29 96.6 32 ............................G TGGGTGAGCGCGGGGCGCTCGTCGGGGCCGGG 70800 29 96.6 32 ............................G TCGCCCGGGACTCGACTCCCGAGGTCGACAGA 70739 29 100.0 32 ............................. TTCAGGACGCACGTCCCGGTGGCGACGACCTC 70678 29 100.0 32 ............................. GACGGGTCGTGGACGGGCGCAGACCGAACGCG 70617 29 100.0 33 ............................. GGTGGCCACCGCGACACCAAGGCCACCGCCTGC 70555 29 100.0 32 ............................. GCCCCGGCTGCTCCCCCTGCCTGCCGGGGCGT 70494 29 96.6 32 ............................G CTGTCCCTGCCCCCTCGACGCCGTGCGAACAC 70433 29 96.6 32 ............................G AGATCCCCGCCGGCACCCGCATCTGACCATCG 70372 29 96.6 32 ............................G GAGGACCGGTGGCCCGTGCGGGCCTGGTACGT 70311 29 100.0 32 ............................. ACCCGGTCACGAGCGCGACGCAGCACCCGGAT 70250 29 100.0 32 ............................. CGGCTGTCACGGGGGGCCTGGTGTGGGTTGGG 70189 29 96.6 32 ............................T GGCTTGATTTCAAGGGAGTTGCCGTAGGGGCG 70128 29 96.6 32 ............................G GCCGAGCACAGCGCGGCGACCGTGGCCACGAC 70067 29 96.6 32 ............................T CGGCCGGATTCGCAGCCCGGCGCGTTCTGGTG 70006 29 100.0 32 ............................. GGGAAACCGTCAGCAACCGTGAGGTTGAGCCA 69945 29 100.0 32 ............................. CCCTACCTCGGGTCTAACCTGCTCGTGCCGAC 69884 29 100.0 32 ............................. CGCTCGTCGTGGCCGGGACCGTTCGGGCACGC 69823 29 96.6 32 ............................G CTCCCGGCCGGCGCGCAGGTCTCTCCCCTCGC 69762 29 93.1 32 ..A.........................A GGCTCGCAGGCCGCCGGCGCGCTCTCGGGCCT 69701 29 96.6 32 ............................G GAAGCCATGTCGCTCGGCATCGACTCCTACTC 69640 29 96.6 32 ............................G TCCGGCGTCAAGCAGGTGTTCATCGACCACAA 69579 29 96.6 32 ............................G GTCTCCACGCTGTGGATCGACACCACGAGCGG 69518 29 96.6 32 ............................G CGCGGCTTCGACGCCGCGGACGAGACCGACAC 69457 29 96.6 32 ............................G TCGTCGCCGGCGGTGCCGATGATGAGCTCGAC 69396 29 96.6 32 ............................G GTCGTCCCGGAGCAGCTGCGCCTGAGCGCGGG 69335 29 96.6 33 ............................A GCTCGTGCTGTAGAGCCATGCCGGGACGTCGTC 69273 29 96.6 32 ............................G ACGTGGATCGCCGACGGACGCTCGGCCTCCGA 69212 29 100.0 32 ............................. GTCGCCTCGAGGCCGCGCGAGGTCTCGACGAT 69151 29 100.0 33 ............................. GCCCTCACTGCCGACGACGTCTTCGGTGCCGAC 69089 29 96.6 32 ............................G ACCACCGGCGACGACGCCCGCACGCTCGGCGA 69028 29 100.0 32 ............................. AACGTGCACAGCGCCGGCCTCCGATTCCTGGC 68967 29 100.0 32 ............................. CGAGGGGATGATGCGGAACCCGCCGGCGCTGC 68906 29 100.0 32 ............................. CCATCGGGCAGAAGGGCGTCGCTCACGCCGTC 68845 29 96.6 32 ............................G GTCGGCTACGACGTCGCCCGCGAGACCTCACA 68784 29 100.0 33 ............................. CACTCGCGCTGGGGCTCGGGCACCAGGGCGTAG 68722 29 100.0 32 ............................. TGGACGTTCGTCCAACTGTTGTCCACGTGCAT 68661 29 96.6 32 ............................G TAGTCCACGACCGCGCCGTTGGCCTGTATGAG 68600 29 100.0 32 ............................. GTCCGGGTCTCCATGGACCCCTCGTCCTACAT 68539 29 100.0 32 ............................. GGCGCGTCGGCGGGAGCAGTGGCGGGAGCGTC 68478 29 100.0 32 ............................. TGGAAGAGCAACGGCCACCACAAGCGCTCCGC 68417 29 100.0 32 ............................. GCGGCTACAAGCTGTACGCCTTTGCGCCAGTC 68356 29 96.6 33 ............................G ACCCACGCGTTTGGTGCCTTGCCCGCCGTGTGC 68294 29 100.0 32 ............................. TCGTCGGGGGTGACCGAGACCAGGGATGCGGG 68233 29 100.0 32 ............................. CATCAGCGTTACCGGGTCTACAACCTCCTTAA 68172 29 100.0 33 ............................. GACGGCGGCCTGCACCTCGGCGATGGCGCGGGA 68110 29 93.1 33 ...T........................G GGGCGCCACCTTGTCACGTTCGGAACGAGTCGG 68048 29 100.0 32 ............................. CTCTTCACGAGGAATGCGCCCTTCCCACTCCT 67987 29 96.6 32 ............................G TACGACGCGGCATGGGCCGCTGCGGACGAGGT 67926 29 96.6 32 ............................G CCGGGTAGGGGTCAGCCGTCGAGCCGTCGAAG 67865 29 100.0 32 ............................. GCCGGGTCTGGCACCTGGCGCAGCCCCTGTCC 67804 29 100.0 32 ............................. CCGCCGCGGACGTGAATCCCTTGGACCCCTGG 67743 29 96.6 32 ............................G CCCGGCTCGAAGCGCTGACCGCCCCGGTGTCC 67682 29 96.6 33 ............................G TGCCGCGACCTGCCCGAGTCGTTCCTCGCCGAC 67620 29 96.6 32 ............................G TAGTCGCGGAACTCGTCGGACGCGAACCGCAT 67559 29 96.6 33 ............................G TCACGGGGCATGACCTCCTCGACGGCCGCGGCC 67497 29 100.0 32 ............................. AGGCGCCACCCGGTCAACGTCGGGAAGATACC 67436 29 100.0 33 ............................. CTCGTCGGCGCGACCTGCGCCGCCGAAGACTGT 67374 29 100.0 29 ............................. CTTAGCGATTCCGCCACCGATGCTGTTCC 67316 29 96.6 32 ............................G AACCGGGTCGGCACGGCGACCGTCCCGTACTC 67255 29 100.0 32 ............................. GCGGGAGAGCTCGGCGCGGTTCTGGACCCGGA 67194 29 100.0 32 ............................. TCGCATGCTCTGGGCTCCTCAGAAGATCTGGA 67133 29 96.6 33 ............................G GACCAGGACGCCCAGCTGCGCGAACTGCGCGGC 67071 29 100.0 32 ............................. GAGCCGGTCGGGCGCATCGCCGCCCAGCGCGA 67010 29 96.6 32 ............................G CACGCGAGCACCGCGGCGCTGACGGTATCGCC 66949 29 100.0 32 ............................. GTCACGCGGGTCTCATCCGGCGGGGTGAGCTC G [66932] 66887 29 96.6 32 ............................G GACCTCAAGACCGCGATCCGCAAGGAACAGCG 66826 29 96.6 32 ............................G TTCAGGACTGCCTTCCCACTGGGCGTGAACTT 66765 29 96.6 32 ....G........................ AGCCCGACCAGGCCGATAACGACCGGAAGAAT 66704 29 100.0 32 ............................. CACAACCCCGGCAGCGTGACCTCAGGGGGCTG 66643 29 93.1 32 ...............A............G TGCGACGCCTCCACGACCTCGCGGGCGTACCC 66582 29 96.6 32 ............................G GTAGGTGTCAAGCGCTGCAACACAGTCAAACT 66521 29 96.6 32 ............................G GTAGGTGTCAAGCGCTGCAACACGGTCAAACT 66460 29 100.0 32 ............................. CACCCCGAGACGGACCACCTGCAGGCCGACAT 66399 29 96.6 32 ............................G GCGGACCTTGTCGACGGCGGTGGGGTAGTCCG 66338 28 89.7 32 .C...................C-...... TCTGGCCGTTCGGTGGTGGCGGTCTGGGGTCG 66278 28 79.3 30 ...........A..G...T...-..G..G GGCCCGATGGTGTCGTCGCGCACCGCTTCT 66220 29 72.4 0 CC.......T.A......CA.....C..G | ========== ====== ====== ====== ============================= ================================= ================== 85 29 97.5 32 GTGCTCCCCGCGTGAGCGGGGGTGATCCC # Left flank : CGTGGCCAGCGGGGGCGCCAGCTACCTGATCGAGGGCGGTTCCCGTGGTGGTGAACATGACGGGCGACGAGGGTTGGTTCGGGTACAAGTCGCTCGACTCGCTCGTGGGCGACGCCTGGACCCAGTTCACGGGGCTCCACGACCAGGACTACCACGAGGCGCGGGAGGCCCATCAGCCGCGGAACCGGACAGCGACAGCAGCCCGACGCCGGTCGGCGCCTCGACACTATCGGCTGGTGAGAGCGGGGACTTCGACGACGAGGACGAGAACCGCCGCCGACTCCCCCGGCTCAAGGCGCTCTTCTCCCTTTGAAGACCTGGACGACGATGCTCGTGCGGGACTGCCGCCGAGCGGGAGACCCGCGACGCATGTGCCATACATCAACGAGGGCGCCTCGTTCGTCAGTTCAGGAAATGTGAGCGGAGGCCCGTGCATGGTCGCCGCCGGAGAAGTGAAGGCAATACGCTGACAACGGCGGTAAAGTCGCAGGTCAAGAAGA # Right flank : AGTTCTCACCGCTTAGCCACCCGCGGCCGCCCCCAGGCCGCCACCGCCCCACGAGCGCACCTGGATTTCAGGCGTCCTCGGTGGACGCCGGGACCAGGCCTCCGAGGGCCGCTGCGGCGGCGCCCAGGACGAGTCCCACGCGCAGGTGCGGGGCGCGCACCCCGCGGGCACGCATGCGCTCGCCCCAGCGGTACGCGCCCTTCTCCCCGACGACGGCGAACGCGGTCGTCGCCCCGAGGACGACAGCCGTTCCGACGGCGATCGCGACCTTTCCGCCCGGGGTGATCTCGACCGGCGTGAGGGTGTACGGCGTGTTGTCCGGGACGTCTTCGTCGGACGTCTGCTCCCAGGGCGTCGTCGTGCCTGCGGCGACCTCGGAGCCCTCGGTGTCACGCAGGGCGTCGCGGACCTTGCGGACGCCGTCGATCGCCTGACGGCCCTCGCCGGTCCGGAGCAGCACCGCAGCGCCGGCGACCCCGCAGGCCGTCTTGAGGAGCGCC # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.68, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGGTGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGAGCGGGGGTGGTCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [22-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //